| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 5 | 15,914 | T→C | I274M (ATA→ATG) | unknown ← | 1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase (EC 1.1.1.267) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 5 | 15,914 | 0 | T | C | 100.0% | 156.2 / NA | 54 | I274M (ATA→ATG) | unknown | 1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase (EC 1.1.1.267) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (9/45); total (9/45) | |||||||||||
AATTTAATTTGGCGATCTAAAAATGCCTGCACAGCGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCTATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGCTTGTTCCGGCGTAATGCCGTCAAATTCGCTTAACGCCGTAT > 5/15669‑16152 | aatttaatttGGCGATCTAAAAATGCCTGCACAGCGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTg < 1:81322/251‑1 (MQ=255) ttGGCGATCTAAAAATGCCTGCACAGCGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGa < 1:835840/251‑1 (MQ=255) ggCGATCTAAAAATGCCTGCACAGCGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACg > 1:534936/1‑251 (MQ=255) aaTGCCTGCACAGCGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTg > 1:185316/1‑230 (MQ=255) aaTGCCTGCACAGCGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTCTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGat < 1:450079/251‑1 (MQ=255) cacaGCGATTTCATAGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCGAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGc < 1:636572/250‑1 (MQ=255) cGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCAt < 1:296346/250‑1 (MQ=255) ttCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAgaat < 1:349221/251‑1 (MQ=255) gcggcATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGc < 1:435782/234‑1 (MQ=255) gcATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCTGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATgg < 1:428208/250‑1 (MQ=255) gcATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATgg < 1:610809/250‑1 (MQ=255) gcATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATgg < 1:324166/250‑1 (MQ=255) cattcattGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGAt < 1:344521/251‑1 (MQ=255) attcattGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCAcc < 1:529642/232‑1 (MQ=255) attcattGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGAtt > 1:299209/1‑251 (MQ=255) ttcattGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGaatg < 1:778252/251‑4 (MQ=255) ttcattGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTg < 1:778266/251‑1 (MQ=255) gtcgtAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAgaa > 1:59744/1‑228 (MQ=255) tcgtAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGaat < 1:396350/250‑1 (MQ=255) tcgtAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGGGTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGaat < 1:770111/250‑1 (MQ=255) cATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGaat > 1:223095/1‑244 (MQ=255) atatTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATg < 1:158206/229‑1 (MQ=255) gACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCAtt > 1:95939/1‑251 (MQ=255) gCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGat < 1:626216/185‑1 (MQ=255) gCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAaaca < 1:578763/250‑1 (MQ=255) cGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAaacaac < 1:670003/251‑1 (MQ=255) gTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGc > 1:648580/1‑179 (MQ=255) ggATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTg < 1:270900/140‑1 (MQ=255) ggATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCg < 1:21466/156‑1 (MQ=255) ggATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAAc < 1:399139/166‑1 (MQ=255) aTAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAatat < 1:524920/251‑1 (MQ=255) aTAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAatat < 1:517753/251‑1 (MQ=255) cGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTc < 1:283215/251‑1 (MQ=255) ttGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGAt < 1:34369/181‑1 (MQ=255) ttGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAatat < 1:681978/245‑1 (MQ=255) tGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGatat > 1:643726/1‑154 (MQ=255) tAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGcc < 1:607007/251‑1 (MQ=255) tAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGcc < 1:373130/251‑1 (MQ=255) cGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGt < 1:624140/251‑1 (MQ=255) gCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCAt < 1:761840/152‑1 (MQ=255) aaaaaaGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTcatcat < 1:621152/251‑1 (MQ=255) aaaaGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCAtgg < 1:658579/251‑1 (MQ=255) gTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGAt < 1:694118/151‑1 (MQ=255) aCGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGcc > 1:677874/1‑197 (MQ=255) gAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTc < 1:618960/185‑1 (MQ=255) gtgcggtgcgGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGAcc < 1:512598/235‑1 (MQ=255) gtgcggATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATg < 1:807257/240‑1 (MQ=255) ggATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGc < 1:223116/245‑1 (MQ=255) gATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGCTTGTTc < 1:736114/250‑1 (MQ=255) gTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGCTTGTTCCGGCGTAATGc < 1:788969/250‑1 (MQ=255) cgcATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGCTTGTTCCGGCGTAATGCCGTCAAATTCGCTTAACGc < 1:635290/251‑1 (MQ=255) cgcATATCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGCTTGTTCCGGCGTAATGCCGTCAAATTCGCTTAACGc < 1:781964/251‑1 (MQ=255) tatCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAaaca < 1:477412/114‑1 (MQ=255) atCAGGATTGCCCATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGCTTGTTCCGGCGTAATGCCGTCAAATTCGCTTAACGCCGtat < 1:683935/251‑1 (MQ=255) | AATTTAATTTGGCGATCTAAAAATGCCTGCACAGCGATTTCATTGGCGGCATTCATTGCCGTCGTAGCATATTGACCGGCGGCGAACGCCTCGATGGCGAGTTTCAAGCAAGGATAACGTTGATAGTCCGGTGCCAAAAAAGTCAGCCCGTTTAATTGATAGAAATCTAGCGGCGCGACGCCGGAAAACGTGCGGTGCGGATACGCCATGGTTTCGGCGATCGGCGTGCGCATATCAGGATTGCCTATTTGCGCGATGACGCTGCCGTCGATATAACGCACCATAGAATGAATAATGGATTGCGGGTGAATAATCACTTCCATTTCGTCGGCGGACACGTTAAACAACCAGCGGGCTTCAATATATTCCAAGCCTTTGTTCATCATGGTGGCGGAATCCACGGAAATTTTCTTGCCCATAGACCAGTTCGGATGCGCTACCGCTTGTTCCGGCGTAATGCCGTCAAATTCGCTTAACGCCGTAT > 5/15669‑16152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |