| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 434,309 | C→T | L62L (CTG→CTA) | unknown ← | Cytidine deaminase (EC 3.5.4.5) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 434,309 | 0 | C | T | 100.0% | 198.5 / NA | 74 | L62L (CTG→CTA) | unknown | Cytidine deaminase (EC 3.5.4.5) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (38/36); total (38/36) | |||||||||||
TTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATCCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGCAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATTTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTTCTTATCTTAGCACTTTCACAATAAAAA > 1/434070‑434548 | ttcatAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAg > 1:412046/1‑251 (MQ=255) catAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAgcg > 1:30053/1‑251 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:690617/251‑1 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:649137/251‑1 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:105757/251‑1 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTCGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:451634/251‑1 (MQ=255) aTGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCg < 1:737404/251‑1 (MQ=255) gAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgt > 1:95204/1‑251 (MQ=255) gAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgt > 1:628547/1‑251 (MQ=255) gAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgt > 1:790704/1‑251 (MQ=255) gtgtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAAGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg > 1:536255/1‑236 (MQ=255) gtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgtttgt > 1:697027/1‑251 (MQ=255) gtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgtttgt > 1:620029/1‑251 (MQ=255) aGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTttgttg > 1:687686/1‑251 (MQ=255) gACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGC‑‑GAGTTGATGTTTGTTGCACAGGTGTTg > 1:280214/1‑250 (MQ=255) gttgttTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGtt > 1:235855/1‑192 (MQ=255) tCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAg < 1:656641/251‑1 (MQ=255) gcATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCg > 1:520340/1‑251 (MQ=255) tGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTg < 1:846175/251‑1 (MQ=255) gCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCa < 1:884956/215‑1 (MQ=255) cTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTc < 1:873222/251‑1 (MQ=255) aTGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAACTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATc > 1:427793/1‑232 (MQ=255) cTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAat < 1:843403/251‑1 (MQ=255) gTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCg > 1:76317/1‑171 (MQ=255) gAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAAGTAGGAGTTTCAGCGCGAGCTGTTTAGGCg < 1:4639/162‑1 (MQ=255) aTAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTtg > 1:587026/1‑251 (MQ=255) ttgAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGa < 1:296391/251‑1 (MQ=255) tgAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGAc < 1:293747/251‑1 (MQ=255) aaTGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGCTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACgg > 1:303497/1‑251 (MQ=255) tCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCACCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAAt < 1:349112/250‑1 (MQ=255) cAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCGCCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt < 1:408991/250‑1 (MQ=255) cAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt < 1:681322/250‑1 (MQ=255) ttCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt < 1:301822/245‑1 (MQ=255) cTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAg < 1:648327/251‑1 (MQ=255) gATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCa > 1:455546/1‑251 (MQ=255) ccGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAAt < 1:481585/251‑1 (MQ=255) gAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCAc > 1:803448/1‑147 (MQ=255) aTCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGaaa < 1:34168/251‑1 (MQ=255) ccGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGa > 1:274953/1‑251 (MQ=255) ccGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGa > 1:635771/1‑251 (MQ=255) atgccATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATg < 1:687341/247‑1 (MQ=255) gccATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCt < 1:496824/213‑1 (MQ=255) gccATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACa > 1:627279/2‑251 (MQ=255) aTGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTg > 1:51844/1‑156 (MQ=255) aTGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCt > 1:26741/1‑181 (MQ=255) aTGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt > 1:893518/1‑206 (MQ=255) aTGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGaaa > 1:223693/1‑236 (MQ=255) aTGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGa > 1:380603/1‑246 (MQ=255) aTGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATaa > 1:479810/1‑251 (MQ=255) aTGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATaa > 1:400898/1‑251 (MQ=255) aTGTACAACCGCACCCACATTAAAATGCGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATaa > 1:157502/1‑251 (MQ=255) gTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATaaaa > 1:591134/1‑251 (MQ=255) gTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATaaaa > 1:299394/1‑251 (MQ=255) tACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAAt < 1:196156/251‑1 (MQ=255) aCAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAAtc < 1:717218/251‑1 (MQ=255) cAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATg < 1:641698/193‑1 (MQ=255) cccACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCt < 1:881345/168‑1 (MQ=255) cccACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTg < 1:113781/251‑1 (MQ=255) acaTTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGtt > 1:199368/1‑142 (MQ=255) caTTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGcgcg < 1:114145/62‑1 (MQ=255) caTTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCCCAGGTGTTGCACGGCAAAGTGCGGTAGAAAGCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAAtg < 1:550465/221‑1 (MQ=255) caTTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATc < 1:756387/126‑1 (MQ=255) caTTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAAt > 1:419720/1‑237 (MQ=255) caTTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGta > 1:884453/1‑251 (MQ=255) caTTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGta > 1:95591/1‑251 (MQ=255) tgtgAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCGGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAAtct > 1:91062/1‑200 (MQ=255) aTCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTtcttatc < 1:780534/251‑1 (MQ=255) tggtggCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTTCTTATCTTAGCa < 1:727706/250‑1 (MQ=255) tggtggCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTTCTTATCTTAGCAc < 1:829862/251‑1 (MQ=255) ggCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTTCTTATCTTAGCAc > 1:168005/1‑247 (MQ=255) cATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt < 1:539271/162‑1 (MQ=255) cAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTTCTTATCTTAGCACTTTCACAATaaaaa < 1:211743/250‑1 (MQ=255) gCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCg < 1:191548/37‑1 (MQ=255) gCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTtc > 1:688746/1‑222 (MQ=255) | TTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATCCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGCAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATTTTGTCTGAAATGTGGGATGACATAAAATCTCCTTTTTGCGTATTATTTTTCTTATCTTAGCACTTTCACAATAAAAA > 1/434070‑434548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |