| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 434,243 | C→G | G84G (GGG→GGC) | unknown ← | Cytidine deaminase (EC 3.5.4.5) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 434,243 | 0 | C | G | 100.0% | 206.4 / NA | 75 | G84G (GGG→GGC) | unknown | Cytidine deaminase (EC 3.5.4.5) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (38/37); total (38/37) | |||||||||||
CAAATACTGGTGCAACAAATTATTTTGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATCCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGCAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATTTTGTCTGAAATGTGGGA > 1/433997‑434488 | cAAATACTGGTGCAACAAATTATTTTGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCa < 1:389426/250‑1 (MQ=255) aTACTGGTGCAACAAATTATTTTGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCa > 1:105278/1‑247 (MQ=255) tGGTGCAACAAATTATTTTGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAAc < 1:480178/251‑1 (MQ=255) tGGTGCAACAAATTATTTTGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAACTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAAc < 1:733052/251‑1 (MQ=255) tattTTGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTa > 1:773095/1‑251 (MQ=255) tttGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTaaaa < 1:606777/251‑1 (MQ=255) ttGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAAt < 1:815856/251‑1 (MQ=255) aTGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGCGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTaaaa < 1:454120/244‑1 (MQ=255) cAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATaa < 1:563007/250‑1 (MQ=255) gCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAg > 1:278376/1‑251 (MQ=255) cGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACa < 1:582322/249‑1 (MQ=255) gTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGAGGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAgg > 1:319296/1‑250 (MQ=255) tttCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCTCTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGc < 1:888831/250‑1 (MQ=255) tttCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCAccc < 1:142205/212‑1 (MQ=255) tttCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCa > 1:38058/1‑251 (MQ=255) tttCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCa > 1:839188/1‑251 (MQ=255) tttCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTGTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCa < 1:426900/251‑1 (MQ=255) gCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGAt > 1:496170/1‑251 (MQ=255) cTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAgg > 1:219753/1‑251 (MQ=255) gTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGc > 1:323975/1‑198 (MQ=255) gTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAggta > 1:573203/1‑249 (MQ=255) gTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAggta > 1:33034/1‑249 (MQ=255) gTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAggta > 1:629611/1‑249 (MQ=255) attcattcATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAggt < 1:335154/245‑2 (MQ=255) ttcatAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAAtgt > 1:312805/1‑204 (MQ=255) ttcatAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAg > 1:412046/1‑251 (MQ=255) catAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAgcg > 1:30053/1‑251 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:649137/251‑1 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:690617/251‑1 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:105757/251‑1 (MQ=255) cAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTCGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg < 1:451634/251‑1 (MQ=255) aTGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAAc > 1:73538/1‑168 (MQ=255) aTGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCg < 1:737404/251‑1 (MQ=255) gAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgt > 1:628547/1‑251 (MQ=255) gAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgt > 1:95204/1‑251 (MQ=255) gAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgt > 1:790704/1‑251 (MQ=255) gtgtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCg < 1:505594/157‑1 (MQ=255) gtgtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCg < 1:404791/157‑1 (MQ=255) gtgtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAAGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAgg > 1:536255/1‑236 (MQ=255) gtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAAt < 1:206826/170‑1 (MQ=255) gtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATc < 1:789973/178‑1 (MQ=255) gtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgtttgt > 1:620029/1‑251 (MQ=255) gtAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGAtgtttgt > 1:697027/1‑251 (MQ=255) aGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTttgttg > 1:687686/1‑251 (MQ=255) gACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGC‑‑GAGTTGATGTTTGTTGCACAGGTGTTg > 1:280214/1‑250 (MQ=255) gttgttTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGtt > 1:235855/1‑192 (MQ=255) tttttCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAg > 1:645224/1‑179 (MQ=255) tCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAg < 1:656641/251‑1 (MQ=255) gcATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCg > 1:520340/1‑251 (MQ=255) tGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTg < 1:846175/251‑1 (MQ=255) gCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCa < 1:884956/215‑1 (MQ=255) cTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTc < 1:873222/251‑1 (MQ=255) aTGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAACTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATc > 1:427793/1‑232 (MQ=255) gCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAAc < 1:37113/136‑1 (MQ=255) cTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAat < 1:843403/251‑1 (MQ=255) gTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCg > 1:76317/1‑171 (MQ=255) gCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAAc > 1:755021/1‑83 (MQ=255) gAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAAGTAGGAGTTTCAGCGCGAGCTGTTTAGGCg < 1:4639/162‑1 (MQ=255) aaTAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTaaaa > 1:168414/1‑94 (MQ=255) aTAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTtg > 1:587026/1‑251 (MQ=255) gTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTaaaa > 1:889591/1‑90 (MQ=255) ttgAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGa < 1:296391/251‑1 (MQ=255) tgAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGAc < 1:293747/251‑1 (MQ=255) aaTGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGCTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACgg > 1:303497/1‑251 (MQ=255) tCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCACCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAAt < 1:349112/250‑1 (MQ=255) cAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCGCCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt < 1:408991/250‑1 (MQ=255) cAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt < 1:681322/250‑1 (MQ=255) ttCCTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCt < 1:301822/245‑1 (MQ=255) cTGATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAg < 1:648327/251‑1 (MQ=255) gATTGGCACCGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCa > 1:455546/1‑251 (MQ=255) ccGAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAAt < 1:481585/251‑1 (MQ=255) gAAATAAAAATCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCAc > 1:803448/1‑147 (MQ=255) aTCGCCACCGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGaaa < 1:34168/251‑1 (MQ=255) ccGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGa > 1:274953/1‑251 (MQ=255) ccGATGCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGTAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATCTTGTCTGAAATGTGGGa > 1:635771/1‑251 (MQ=255) | CAAATACTGGTGCAACAAATTATTTTGGCTATGCGGCAAGTGAATTTGCAGCGTTTCCGCACTGTTCAATTCATTCATAAACTGGCGACAATGCCCGCACGGAGTGTAGTTTACCGTGACATCGGTCAGTTGTTTTTCACCGCGCATCCAAGCGTGGCTAATGGCACTTTGTTCCGCATGAATAGTTTGTTGAATGTCCGTTTGGCAAAATTCCTGATTGGCACCGAAATAAAAATCGCCACCGATCCCATGTACAACCGCACCCACATTAAAATGTGAAATCGGCGTGGTGGCATAACAGGCAGCGATAGGCAGGAGTTTCAGCGCGAGCTGTTTAGGCGTGAGTTGATGTTTGTTGCACAGGTGTTGCACGGCAAAGTGCGGTAGAAATCCGAGGTATTTTTGTTCTTGCAAAATATGCCAAATATCTTGTGCCAAGACGGAATGTTCTATCTTGCCTAAAGCATCTTGAATTTTGTCTGAAATGTGGGA > 1/433997‑434488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |