| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 4 | 8,616 | C→T | S3S (AGC→AGT) | unknown → | Twin‑arginine translocation protein TatC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 4 | 8,616 | 0 | C | T | 98.8% | 223.0 / NA | 83 | S3S (AGC→AGT) | unknown | Twin‑arginine translocation protein TatC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (41/41); minor base G (1/0); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCCACAAAAGGAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGCGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGTTGCCGTTTTTATTTC > 4/8374‑8858 | aGCCACAAACGGAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACg < 1:398918/250‑1 (MQ=255)aGCCACAAACGGAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACg < 1:646530/250‑1 (MQ=255)aGCCACAAACGGAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACg < 1:14059/250‑1 (MQ=255)aGCCACAAACGGAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACg < 1:687691/250‑1 (MQ=255) ccACAAACGGAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGAt < 1:15992/250‑1 (MQ=255) acggAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAAc < 1:482905/249‑1 (MQ=255) cggAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAAcc < 1:487815/250‑1 (MQ=255) aaGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAAcccc < 1:899877/250‑1 (MQ=255) cacaAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCAtcact > 1:649953/1‑245 (MQ=255) cacaAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCAtcac > 1:471501/1‑244 (MQ=255) aaaCAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGa < 1:319678/251‑1 (MQ=255) acaacGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTACGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAAc < 1:659294/251‑1 (MQ=255) acGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTa > 1:643909/1‑250 (MQ=255) gAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGc < 1:702054/250‑1 (MQ=255) gAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCa > 1:267232/1‑251 (MQ=255) aaaaaCGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCa > 1:231475/1‑249 (MQ=255) aaaaaCGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCa > 1:563118/1‑249 (MQ=255) aaaaaCGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACt < 1:149323/251‑1 (MQ=255) cGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCttatta < 1:568083/251‑1 (MQ=255) cACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATTCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTAc < 1:455169/250‑1 (MQ=255) ttCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAATTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGt < 1:711998/223‑1 (MQ=255) ttCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCAtcactcac > 1:76600/1‑218 (MQ=255) ttCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCttatta > 1:716152/1‑245 (MQ=255) cggcggAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCattat > 1:47120/1‑251 (MQ=255) gcggAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCattatt < 1:548515/250‑1 (MQ=255) cggAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTAtttt < 1:274163/251‑1 (MQ=255) ggCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTAttt > 1:93457/1‑243 (MQ=255) gCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCg > 1:108578/1‑251 (MQ=255) aagaaATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGtgtttgt < 1:461149/251‑1 (MQ=255) gaaATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTttgttg > 1:789088/1‑251 (MQ=255) aaaTCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGtgtttgtt < 1:78639/249‑1 (MQ=255) aCTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGtt < 1:896957/251‑1 (MQ=255) cTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGttt < 1:642256/251‑1 (MQ=255) aaaCTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTa > 1:526224/1‑251 (MQ=255) ttACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACgc > 1:852908/1‑191 (MQ=255) cATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAAt < 1:97701/251‑1 (MQ=255) aatcaatACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAAc < 1:647994/164‑1 (MQ=255) aatcaatACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTAc > 1:20537/1‑182 (MQ=255) aatcaatACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTtcgtc < 1:378944/199‑1 (MQ=255) aatcaatACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTtcgtc < 1:640397/199‑1 (MQ=255) gATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTAttt > 1:206698/1‑185 (MQ=255) gATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGa > 1:686587/1‑228 (MQ=255) gATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCa > 1:13621/1‑250 (MQ=255) aTCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTa > 1:250074/1‑150 (MQ=255) ggACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCg > 1:411682/1‑248 (MQ=255) ggCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGc > 1:439439/1‑241 (MQ=255) gCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTA‑TTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAg > 1:505502/1‑251 (MQ=255) tCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa < 1:241837/251‑1 (MQ=255) tCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa < 1:707824/251‑1 (MQ=255) tCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa < 1:33348/251‑1 (MQ=255) tCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa < 1:657860/251‑1 (MQ=255) gCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCgtggtg > 1:488642/1‑163 (MQ=255) caTTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACtt > 1:150481/1‑180 (MQ=255) caTTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTc > 1:173894/1‑240 (MQ=255) tGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa > 1:340278/1‑241 (MQ=255) gTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATc > 1:801748/1‑250 (MQ=255) aCCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa < 1:336985/216‑1 (MQ=255) ccGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTAccc < 1:58668/251‑1 (MQ=255) ttGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAg < 1:88463/136‑1 (MQ=255) ttGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAAc < 1:410889/198‑1 (MQ=255) ttGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa > 1:510255/1‑208 (MQ=255) ttGCGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTaa > 1:433506/1‑251 (MQ=255) cGGGATAGCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCTACCAACATCGCCACGCCGTTTTTTACCCCGATTAAAc < 1:876819/250‑1 (MQ=255) gCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCTTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGc < 1:453355/217‑1 (MQ=255) gCCTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa > 1:84301/1‑198 (MQ=255) ccTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACt < 1:107656/123‑1 (MQ=255) ccTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGCCAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGgtg > 1:437485/1‑251 (MQ=255) ccTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGCCAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGgtg > 1:432058/1‑251 (MQ=255) ccTCACATCAGGATAACTTATGACCAGGGTTGACGATACTCAACCCCTCATCACTCACTTGGAAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGGGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCCCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAAAACCGCCACGCCGTTTTTTACCCCGATTAAAcctgcctctt > 1:757649/1‑242 (MQ=255) cTCACATCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGgtgt < 1:465351/251‑1 (MQ=255) cacaTCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGAt > 1:406873/1‑198 (MQ=255) caTCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTg < 1:48631/164‑1 (MQ=255) caTCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGtt > 1:833290/1‑251 (MQ=255) caTCAGGATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGtt > 1:152657/1‑251 (MQ=255) ggATAACTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa > 1:147152/1‑187 (MQ=255) aCTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGTTGCCGTTTTTa > 1:521108/1‑251 (MQ=255) cTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCttatta < 1:758972/69‑1 (MQ=255) cTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCa > 1:783418/1‑181 (MQ=255) cTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAAc > 1:17515/1‑226 (MQ=255) cTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGTTGCCGTTTTTAt > 1:741883/1‑251 (MQ=255) cTTATGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGTTGCCGTTTTTAt > 1:858482/1‑251 (MQ=255) aTGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGTTGCCGTTTTTATTTc < 1:896042/251‑1 (MQ=255) tGACCAGTGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGc < 1:472446/59‑1 (MQ=255) | AGCCACAAAAGGAAGCCCTCGCTGCCACAAAAACAACGGAAAAAACGACCGCACTTTCCCCGGCGGAGCTGGCGGAACAGGAAGAAATCGAACTGGACGAAAAACTCGCCCATTACATCAATCAATACGATCCGGACAATCCGCTGCCGGCTAATACGGCATCGGCACATTTGGCCAAAGTCTCAGAGAAAAGTTAACCGTGCTTTGCGGGATAGCCTCACATCAGGATAACTTATGACCAGCGTTGACGATACTCAACCCCTCATCACTCACTTGGTAGAACTACGCACTCGCTTATTACGCAGCATTATTTTCGTCGCCGTGGTGTTTGTTGCACTAGTTTACTTTTCTAACGAAATTTATAATTTTGTGGCGGCACCGCTGACAGCGAACCTGCCGAACGGTTCCAGCATGATTGCCACCAACATCGCCACGCCGTTTTTTACCCCGATTAAACTCACCGGTGTGGTTGCCGTTTTTATTTC > 4/8374‑8858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |