| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 429,869 | T→C | intergenic (+138/+359) | unknown → / ← unknown | Replication‑associated recombination protein RarA/Anaerobic C4‑dicarboxylate transporter DcuB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 429,869 | 0 | T | C | 100.0% | 226.5 / NA | 79 | intergenic (+138/+359) | unknown/unknown | Replication‑associated recombination protein RarA/Anaerobic C4‑dicarboxylate transporter DcuB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (47/32); total (47/32) | |||||||||||
CAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAGGTAGGCAAAAGAAAGCACTCCGCTAGGGTATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCCGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGCGATATTAATTCAAC > 1/429627‑430114 | cAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATaaa > 1:45987/1‑251 (MQ=255) aTTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAg > 1:75926/1‑251 (MQ=255) aTTTCCCGACCACCAGAGGCATGGAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATa < 1:44269/242‑1 (MQ=255) caccaGAGGCATGGAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAg > 1:123663/1‑236 (MQ=255) ggAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGAttatttat > 1:573033/1‑251 (MQ=255) gAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAgt > 1:420493/1‑224 (MQ=255) gAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGAttatttat > 1:584843/1‑250 (MQ=255) aaaTTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATc < 1:694229/250‑1 (MQ=255) aaTTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATccc < 1:92505/251‑1 (MQ=255) aaTTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATccc < 1:166086/251‑1 (MQ=255) aaTTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATccc < 1:876537/251‑1 (MQ=255) gattaagGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTa > 1:7748/1‑251 (MQ=255) aagGAGAAGTTGGAATGGGTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTTCTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGAc < 1:888035/251‑1 (MQ=255) gagaAGTTGGAATGGCTGCGGGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGAc < 1:756039/249‑1 (MQ=255) aaGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCAt > 1:319655/1‑251 (MQ=255) gAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCAttttttt > 1:607245/1‑251 (MQ=255) ggCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAgg > 1:673739/1‑251 (MQ=255) ggggTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGATTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATa > 1:557643/1‑184 (MQ=255) gggTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAg < 1:401779/187‑1 (MQ=255) ggTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTttgttg > 1:579282/1‑204 (MQ=255) ggTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATccc < 1:26893/216‑1 (MQ=255) ggTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGAc > 1:132088/1‑226 (MQ=255) gATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAg < 1:853443/181‑1 (MQ=255) gATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAg > 1:510783/1‑251 (MQ=255) gATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTG‑‑‑ATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTa > 1:750604/1‑251 (MQ=255) ggAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACg > 1:332350/1‑251 (MQ=255) aGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAg > 1:536749/1‑251 (MQ=255) gTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAg > 1:724630/1‑250 (MQ=255) gTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAg > 1:894867/1‑250 (MQ=255) tataAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCgg < 1:85728/251‑1 (MQ=255) ataAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGa > 1:166590/1‑251 (MQ=255) aaaTAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGt > 1:735994/1‑251 (MQ=255) ggTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATa < 1:107389/145‑1 (MQ=255) aCCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGaaa > 1:796916/1‑251 (MQ=255) tACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAg < 1:509154/167‑1 (MQ=255) tACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAAt > 1:699797/1‑251 (MQ=255) aCTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAAtt > 1:694132/1‑251 (MQ=255) cTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGAc < 1:508470/167‑1 (MQ=255) cTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGcc > 1:671876/1‑204 (MQ=255) ttACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAg < 1:685818/124‑1 (MQ=255) ttACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTa > 1:526364/1‑251 (MQ=255) gcgctgcgctTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTaaaaaa > 1:801332/1‑251 (MQ=255) gcgctTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGa > 1:855722/1‑251 (MQ=255) cgctTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAgtgt > 1:478746/1‑116 (MQ=255) aCTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGc < 1:269225/251‑1 (MQ=255) cTTCGTACCATTGGCAAAGCCAACGTTCGAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGAc > 1:100199/1‑145 (MQ=255) cTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATccc > 1:18623/1‑135 (MQ=255) cTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCgg > 1:217741/1‑249 (MQ=255) tCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGGAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTa > 1:867047/1‑251 (MQ=255) tCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGc < 1:22000/195‑1 (MQ=255) gTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTAt > 1:516469/1‑250 (MQ=255) gTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTAt > 1:161260/1‑250 (MQ=255) tACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAg > 1:563371/1‑179 (MQ=255) ccATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCgg > 1:27288/1‑251 (MQ=255) cAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGcc < 1:899439/250‑1 (MQ=255) aGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGAc < 1:699992/128‑1 (MQ=255) ttCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCt < 1:260958/246‑1 (MQ=255) ttCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGcc < 1:384476/251‑1 (MQ=255) ttCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGc > 1:313879/1‑250 (MQ=255) tccaaggattttgaacgttGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGcc < 1:632237/234‑1 (MQ=255) aTCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGtttt < 1:366608/87‑1 (MQ=255) aTCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCttcttt > 1:411442/1‑251 (MQ=255) tCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGc < 1:102754/165‑1 (MQ=255) ttGGATTTTGTCTTTGGTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTTGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTctttcttt < 1:378478/251‑1 (MQ=255) gTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGgcaag > 1:324652/1‑250 (MQ=255) gTCTTTGCTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGgcaag > 1:208882/1‑250 (MQ=255) cTTGTGAAAAGAAAAGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAaaagaa < 1:388063/251‑1 (MQ=255) aaagaaaaGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGt > 1:472519/1‑251 (MQ=255) aaagaaaaGTAGGCAAAAGAAAGCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGt < 1:895995/251‑1 (MQ=255) aaagaaagCACTCCGCTAGGGCATGATAAAAGTGTAGCCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAAt > 1:838739/1‑251 (MQ=255) aaagCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGc < 1:330658/249‑1 (MQ=255) aagCACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGCGat < 1:97647/251‑1 (MQ=255) cACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGCGATAtt < 1:314264/251‑1 (MQ=255) cACTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAACCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGCCGAAATGCGATAtt > 1:590892/1‑251 (MQ=255) cTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATTCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGCGATATTaa > 1:696312/1‑251 (MQ=255) cTCCGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGgc > 1:311006/1‑208 (MQ=255) ccGCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAaaaga < 1:788560/216‑1 (MQ=255) gCTAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGCGATATTAATTca > 1:179156/1‑251 (MQ=255) tAGGGCATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCTGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGCGATATTAATTcaac < 1:430480/251‑1 (MQ=255) | CAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAAGGAGAAGTTGGAATGGCTGC‑GGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAGGTTTGTTTCGGCATCGACCTACTTTTACTGCGCTGCGCTTGCACTTCGTACCATTGGCAAAGCCAACGTTCAAAATCCTTGGATTTTGTCTTTGCTTGTGAAAAGAAAGGTAGGCAAAAGAAAGCACTCCGCTAGGGTATGATAAAAGTGTAGTCGGTTTTTGTTGATTATTTATCCCCGTGTAAGACGCCCATTTTTTTAAGGATTTTTTAGGAAAGTTACGCCAGCGATGCGTTAGGCGGAGTCTGCTAACTTTTCGTTAAGAAAAATTCTTAAAAAAAGGGAAAAGCGGCTTATCCGGGGTGCCTTTTTCTTTGCCTTCTTTCTTTTGGGCAAGCAAAAGAAAGAAGGTCGCCATCGGCGAAATGCGATATTAATTCAAC > 1/429627‑430114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |