| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 3 | 98,090 | C→T | L18L (TTG→TTA) | unknown ← | AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 3 | 98,090 | 0 | C | T | 98.7% | 212.4 / NA | 76 | L18L (TTG→TTA) | unknown | AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (31/44); total (32/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTTCCGTATCAATATAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCCCCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACCAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATACCGGTTCGTTTTAACGCAGAAA > 3/97845‑98334 | ttttCCGTATCAATATAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACgg < 1:167997/251‑1 (MQ=255) tATCAATATAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGCCGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGCTGAGTTAAGCGCTACGCACCCGATCTTGGGCTTCTTTTACGGTTTTTTTCGGCAAGCCGGCGAGAGTGAAACCGGGTTTACCGTTACTTAAATTCCCTTCTTCGGTGACCCACGGCCCCTGa > 1:685891/1‑251 (MQ=255) cAATATAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACg > 1:411385/1‑251 (MQ=255) cAATATAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGGAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGGGACTAACGGCGCCTGAACg > 1:693934/1‑251 (MQ=255) aaTATAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGGATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGGTTTTTCCGGCAAGCCGACGAGAGGGAAACCGGGGTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACg > 1:741765/1‑250 (MQ=255) atatAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGGGAAACCCGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGc > 1:135402/1‑250 (MQ=255) ataACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCa < 1:180496/251‑1 (MQ=255) aaCCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGGATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGGTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGGTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATg > 1:14069/1‑251 (MQ=255) aCCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATgg < 1:528729/251‑1 (MQ=255) aCCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGGATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATgg > 1:208711/1‑251 (MQ=255) ccGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGa < 1:77228/251‑1 (MQ=255) ccGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGa < 1:807356/251‑1 (MQ=255) ccGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGa < 1:850920/251‑1 (MQ=255) ccGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGa < 1:361465/251‑1 (MQ=255) cGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGAt < 1:327387/251‑1 (MQ=255) gAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATg < 1:117508/250‑1 (MQ=255) cAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTg < 1:302260/251‑1 (MQ=255) aTGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAAc < 1:899481/251‑1 (MQ=255) ccGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGAt < 1:808038/251‑1 (MQ=255) gCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGGATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTaa > 1:869112/1‑251 (MQ=255) aTGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTCACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGa < 1:65889/251‑1 (MQ=255) tGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGAc < 1:208417/251‑1 (MQ=255) cAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATg < 1:193729/250‑1 (MQ=255) cGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGc < 1:883693/251‑1 (MQ=255) tcctccTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGgcgc < 1:383401/192‑1 (MQ=255) ctcctTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATa > 1:565356/1‑251 (MQ=255) tcctTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATAc < 1:770025/251‑1 (MQ=255) cttcttTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTg < 1:113776/251‑1 (MQ=255) tcttTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAAc > 1:446134/1‑215 (MQ=255) tcttTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGGGAAACCGGGGTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGaa > 1:481588/1‑251 (MQ=255) cttggggTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAAc < 1:242608/247‑1 (MQ=255) cttTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGa > 1:468959/1‑199 (MQ=255) gggTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGGATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAggg > 1:250508/1‑251 (MQ=255) tCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCgg < 1:282826/251‑1 (MQ=255) gggCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGac < 1:40487/250‑1 (MQ=255) gCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGacaa < 1:689048/250‑1 (MQ=255) cGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGacaac < 1:668659/250‑1 (MQ=255) gcGGTAGCGCTTTTGGCGGAGTGTCTGACTTCGGCGGTGAGTAAGGCGCTGCGCTCCCGATCTTGGGCTTCTTAGACGGTTTTTTCCGGCAAGCCAACGAGAGTGAAACCGGGTTTAACGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAGCGCCCATGGATTCGCGTTTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATTCTGAACAGGGAATGCGGAGCGACAACATaaaaaa < 1:774866/249‑1 (MQ=255) aCGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATaaaaaa < 1:133738/250‑1 (MQ=255) gTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGa > 1:874499/1‑224 (MQ=255) gTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAgtg > 1:793704/1‑251 (MQ=255) gTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAgtg > 1:25749/1‑251 (MQ=255) gggTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTaa < 1:808593/196‑1 (MQ=255) gggTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAAt > 1:719780/1‑251 (MQ=255) gTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAg > 1:899510/1‑215 (MQ=255) cTGAATTCGGCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATAc < 1:161431/251‑1 (MQ=255) gCGTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACtttt > 1:682580/1‑251 (MQ=255) gTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAAc > 1:536661/1‑150 (MQ=255) gTTGAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACtttttt > 1:460656/1‑251 (MQ=255) gAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACgg < 1:805469/114‑1 (MQ=255) gAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATAc > 1:680312/1‑179 (MQ=255) gAGTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCg > 1:547153/1‑251 (MQ=255) gTAAGGCGCTACGCACCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGAt > 1:189560/1‑251 (MQ=255) acccGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGaaa < 1:167698/250‑1 (MQ=255) cccGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAAt < 1:746908/251‑1 (MQ=255) aTCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAAc < 1:97846/163‑1 (MQ=255) aTCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAg > 1:443918/1‑243 (MQ=255) cTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCtt > 1:820580/1‑251 (MQ=255) gCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAGCGGCGCCTGAACGCCCATGGATGCGCGGCTGTATACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCtttttt < 1:332234/250‑1 (MQ=255) tcttTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAAc > 1:667573/1‑116 (MQ=255) ccGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTc < 1:738739/251‑1 (MQ=255) gagTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAAc > 1:576832/1‑85 (MQ=255) agTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGt < 1:110149/249‑1 (MQ=255) agTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGt < 1:60475/249‑1 (MQ=255) agTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGt < 1:218124/249‑1 (MQ=255) agTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGt < 1:808081/249‑1 (MQ=255) tGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTgc < 1:101394/250‑1 (MQ=255) ccGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGa < 1:550226/89‑1 (MQ=255) ttACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATAcc < 1:469843/251‑1 (MQ=255) ttACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATAc < 1:487606/250‑1 (MQ=255) ttACTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATAc < 1:492287/250‑1 (MQ=255) cTTAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATACCGGt > 1:728478/1‑251 (MQ=255) tAAATGCACTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGt < 1:832221/225‑1 (MQ=255) cTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAAc > 1:416784/1‑89 (MQ=255) cTTCAATGGTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATACCGGTTCGTTTTaa > 1:633950/1‑250 (MQ=255) ggTGACTAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATACCGGTTCGTTTTAACGCAGaaa > 1:207750/1‑251 (MQ=255) | TTTTCCGTATCAATATAACCGGAAGCGGCAAGCATGCCGATGGCAATGGGCAAATCGAAGCGTCCTCCTTCTTTGGGTAAATCGGCGGGGGCGAGATTGACGGTAACGCGTTTGGCGGGGTATCTGAATTCGGCGTTGAGTAAGGCGCTACGCCCCCGATCTTGGGCTTCTTTGACGGTTTTTTCCGGCAAGCCGACGAGAGTGAAACCGGGTTTACCGTTACTTAAATGCACTTCAATGGTGACCAACGGCGCCTGAACGCCCATGGATGCGCGGCTGTAAACGATGGCTAAAGACATGTTTGGCTCCGTAATACTGAACAGGGAATGCGGAGCGACAACATAAAAAAAGTGTGAAATGAAAGAAATTCATACCGCACTTTTTTGCGATCGGGATCGCAGAAATCGTCTTTTTTAGGCAAAAACCGGTGCAAACCACCCGTCTAATGTTGCCGCCAGACGATCGATACCGGTTCGTTTTAACGCAGAAA > 3/97845‑98334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |