Predicted mutation
evidence seq id position mutation annotation gene description
RA 3 62,387 A→C intergenic (+122/+260) unknown → / ← unknown hypothetical protein/NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*362,3870AC100.0% 172.2 / NA 62intergenic (+122/+260)unknown/unknownhypothetical protein/NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2)
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (33/29);  total (33/29)

TTCCGAAAGAGTTGCCTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACAGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCTTTTTAT  >  3/62141‑62633
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                      
ttCCGAAAGAGTTGCCTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCgcgc                                                                                                                                                                                                                                                    <  1:513451/251‑1 (MQ=255)
     aaaGAGTTGCCTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGGGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTTCCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATgg                                                                                                                                                                                                                                               <  1:479628/251‑1 (MQ=255)
        gagTTGCCTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATgg                                                                                                                                                                                                                                               >  1:550534/1‑248 (MQ=255)
           ttGCCTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACat                                                                                                                                                                                                                                          <  1:476046/250‑1 (MQ=255)
              ccTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACattat                                                                                                                                                                                                                                       <  1:183194/250‑1 (MQ=255)
              ccTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACattat                                                                                                                                                                                                                                       <  1:321555/250‑1 (MQ=255)
               cTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTg                                                                                                                                                                                                                                     <  1:722474/251‑1 (MQ=255)
                     gcgTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACattat                                                                                                                                                                                                                                       >  1:852925/1‑243 (MQ=255)
                       gTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATgg                                                                                                                                                                                                                                               >  1:64899/1‑233 (MQ=255)
                       gTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTAc                                                                                                                                                                                                                                            >  1:604363/1‑236 (MQ=255)
                                     tCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAg                                                                                                                                                                                                               <  1:687533/251‑1 (MQ=255)
                                         aTTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACat                                                                                                                                                                                                                                          >  1:810954/1‑220 (MQ=255)
                                                    gAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGt                                                                                                                                                                                                >  1:646760/1‑251 (MQ=255)
                                                      gtgtGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAg                                                                                                                                                                                                 <  1:279009/248‑1 (MQ=255)
                                                        gtgACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACatta                                                                                                                                                                                                                                        <  1:705402/207‑1 (MQ=255)
                                                                aCGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGaa                                                                                                                                                                                    <  1:643415/251‑1 (MQ=255)
                                                                     aTTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATtct                                                                                                                                                                                >  1:809064/1‑250 (MQ=255)
                                                                        tAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCgt                                                                                                                                                                                                            <  1:726935/219‑1 (MQ=255)
                                                                                        gAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAacaaca                                                                                                                                                            >  1:882831/1‑251 (MQ=255)
                                                                                               aTCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATag                                                                                                                                                     <  1:505481/251‑1 (MQ=255)
                                                                                                    ccGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTCATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGAc                                                                                                                                                 <  1:557946/250‑1 (MQ=255)
                                                                                                                  acaaTAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACat                                                                                                                                                                                                                                          >  1:3676/1‑147 (MQ=255)
                                                                                                                  acaaTAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGttt                                                                                                                                                                                                       >  1:191647/1‑182 (MQ=255)
                                                                                                                  acaaTAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGttt                                                                                                                                                                                                       >  1:843759/1‑182 (MQ=255)
                                                                                                                   caaTAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACat                                                                                                                                                                                                                                          >  1:587431/1‑146 (MQ=255)
                                                                                                                                   aaaaaaCACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGaa                                                                                                                                                                                    <  1:772718/184‑1 (MQ=255)
                                                                                                                                                   aTTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGt                                                                                                                       >  1:306088/1‑229 (MQ=255)
                                                                                                                                                               ccATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACattat                                                                                                                                                                                                                                       <  1:811499/105‑1 (MQ=255)
                                                                                                                                                               ccATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACat                                                                                                                                                                                                                                          <  1:110367/102‑1 (MQ=255)
                                                                                                                                                               ccATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATag                                                                                                                                                     <  1:6160/187‑1 (MQ=255)
                                                                                                                                                               ccATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGc                                                                                                     >  1:276843/1‑235 (MQ=255)
                                                                                                                                                                       gAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAAc                                                                                                                                 <  1:598582/199‑1 (MQ=255)
                                                                                                                                                                         gTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAGCGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTaa                                                                            >  1:841225/1‑250 (MQ=255)
                                                                                                                                                                            cATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGttt                                                                                                                                                                          <  1:137535/153‑1 (MQ=255)
                                                                                                                                                                            cATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGt                                                                                                                >  1:509310/1‑211 (MQ=255)
                                                                                                                                                                                                        tttttAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGc                                                                                                                                        >  1:228614/1‑159 (MQ=255)
                                                                                                                                                                                                                         cTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCt                            >  1:817794/1‑250 (MQ=255)
                                                                                                                                                                                                                         cTTTTATGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCt                            >  1:830487/1‑250 (MQ=255)
                                                                                                                                                                                                                              aTGCAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAg                                  <  1:369295/239‑1 (MQ=255)
                                                                                                                                                                                                                                 cAATAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAg                   <  1:359055/251‑1 (MQ=255)
                                                                                                                                                                                                                                   aTAGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTg                 >  1:870598/1‑251 (MQ=255)
                                                                                                                                                                                                                                     aGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGaaa                                                                                       <  1:632719/179‑1 (MQ=255)
                                                                                                                                                                                                                                     aGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCAt                                                           >  1:836685/1‑207 (MQ=255)
                                                                                                                                                                                                                                     aGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCg               >  1:69930/1‑251 (MQ=255)
                                                                                                                                                                                                                                     aGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCg               >  1:258448/1‑251 (MQ=255)
                                                                                                                                                                                                                                     aGGTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCg               >  1:737128/1‑251 (MQ=255)
                                                                                                                                                                                                                                      ggTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAgggg                               <  1:267221/234‑1 (MQ=255)
                                                                                                                                                                                                                                      ggTAATACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCgg              >  1:803977/1‑251 (MQ=255)
                                                                                                                                                                                                                                           tACGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATc         <  1:411329/251‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAAc                                                                                                                                 <  1:607613/129‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGt                                                                                                                       >  1:40344/1‑139 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGt                                                                                                                <  1:723704/146‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAggg                                <  1:156521/226‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTc                       >  1:98492/1‑235 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAg                   <  1:298155/239‑1 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCtt       >  1:625060/1‑251 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCtt       >  1:488373/1‑251 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCtt       >  1:296651/1‑251 (MQ=255)
                                                                                                                                                                                                                                             cGTCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCtt       >  1:26014/1‑251 (MQ=255)
                                                                                                                                                                                                                                               tCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCtttt     >  1:616624/1‑251 (MQ=255)
                                                                                                                                                                                                                                               tCTGGACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCttt      <  1:656147/250‑1 (MQ=255)
                                                                                                                                                                                                                                                  ggACCGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCTTTTTAt  >  1:116607/1‑251 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                      
TTCCGAAAGAGTTGCCTTGCGGCGTATTGGGTGAAGATCCGATTTTTAATGCGAGTGTGACACAACGGGATTTAGCGGTACGGTGGCTGAAATTAATCAGCCGGATTTTAGACAACAATAAGTAATTTGTTAAAAAACACTGTGTTCATTTTCAATTTACCATAAATGAGTACATTTGTTTTGTCCCCAAAATTTATGTTTTTTTAGAGAAATTAACCTTTTATGCAATAGGTAATACGTCTGGACAGCGCTATGGTACATTATTGTTCGTGTGGTTGACCTTATGAGCGTTGTTTTAGCAGTTGACATTTGGAATTCTCCGTTTTGCTGAAAACAACATTGATAGAGACGGATTAGGCGTTGAACGCTTCTACGTCCCGGGTCGCAACTCTGCCGCTTCTATCGAAATCTGCTTCTAACCGAGGCTGAAATTCATCGTAAAAAAACGACCGCACTTTGAGGGGGCTCCTTCAAAGTGCGGCTATCTTTTTAT  >  3/62141‑62633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑