| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 3 | 31,180 | T→C | L113L (TTA→TTG) | unknown ← | LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 3 | 31,180 | 0 | T | C | 100.0% | 229.9 / NA | 81 | L113L (TTA→TTG) | unknown | LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (49/32); total (49/32) | |||||||||||
GGCATAAGCGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGTAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCATAATATTGCGGCTGATTGCCCGGCACCGAAAG > 3/30936‑31422 | ggCATAAGCGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTc > 1:511421/1‑250 (MQ=255)ggCATAAGCGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTc > 1:576067/1‑250 (MQ=255)ggCATAAGCGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTc > 1:784473/1‑250 (MQ=255) cATAAGCGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTccac < 1:6826/251‑1 (MQ=255) aGCGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATa > 1:223160/1‑251 (MQ=255) cGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATAc < 1:891506/250‑1 (MQ=255) gggCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATAc > 1:214873/1‑248 (MQ=255) gggCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCtt > 1:6956/1‑251 (MQ=255) gggCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCtt > 1:806827/1‑251 (MQ=255) cTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTc < 1:56037/250‑1 (MQ=255) cTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATg < 1:822183/250‑1 (MQ=255) tgggCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAAc < 1:246704/251‑1 (MQ=255) ggCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAAcc < 1:331063/250‑1 (MQ=255) gCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAg > 1:586501/1‑251 (MQ=255) gCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAg > 1:648074/1‑251 (MQ=255) gAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGctc > 1:522333/1‑222 (MQ=255) gAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAgcgc > 1:359937/1‑249 (MQ=255) tttATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGat < 1:473626/251‑1 (MQ=255) gCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAAcc < 1:26561/235‑1 (MQ=255) aaTCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATAc < 1:721855/200‑1 (MQ=255) gtCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGataat < 1:829956/234‑1 (MQ=255) gtCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGgttcgcgt > 1:421012/1‑251 (MQ=255) gtCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCCTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGgttcgcgt > 1:356420/1‑251 (MQ=255) cgcCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGaa > 1:656433/1‑251 (MQ=255) gCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGa > 1:837483/1‑251 (MQ=255) cATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAAtt < 1:273561/248‑1 (MQ=255) gtgCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAatat > 1:676127/1‑220 (MQ=255) ggCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAAt > 1:388884/1‑251 (MQ=255) cGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGcc > 1:131640/1‑204 (MQ=255) tAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTg < 1:638890/177‑1 (MQ=255) tAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAAcc > 1:662607/1‑196 (MQ=255) aTTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGa > 1:233404/1‑251 (MQ=255) ggAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATccgccg > 1:509083/1‑251 (MQ=255) cGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGAtt < 1:610107/250‑1 (MQ=255) aCCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTg > 1:801679/1‑250 (MQ=255) ggTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACg > 1:242475/1‑222 (MQ=255) gTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTaa > 1:136788/1‑251 (MQ=255) aaTCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAgg < 1:834635/251‑1 (MQ=255) aTCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGc < 1:163083/251‑1 (MQ=255) aTCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGc < 1:3608/251‑1 (MQ=255) gAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCTGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCaaa < 1:704693/164‑1 (MQ=255) aGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAAcagcag > 1:839335/1‑251 (MQ=255) aGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCACCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATAc > 1:374760/1‑136 (MQ=255) ttttATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAAcagcag < 1:208712/249‑1 (MQ=255) aTGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATAtt > 1:462494/1‑175 (MQ=255) ggtggtGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGc < 1:334601/245‑1 (MQ=255) gtgtTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATAtt > 1:896595/1‑166 (MQ=255) gtgtTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTg > 1:124648/1‑250 (MQ=255) tgtTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGcc < 1:32317/251‑1 (MQ=255) ttATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCAt > 1:811745/1‑251 (MQ=255) tATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGataa > 1:22893/1‑158 (MQ=255) tATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGc > 1:219080/1‑223 (MQ=255) tATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATg > 1:351423/1‑251 (MQ=255) tAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCg < 1:848527/251‑1 (MQ=255) aaCGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCgg < 1:254085/251‑1 (MQ=255) aCGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGtt > 1:562200/1‑250 (MQ=255) gtcgtAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCgg > 1:368230/1‑238 (MQ=255) cgtAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCaa > 1:587551/1‑251 (MQ=255) gtAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCaaa > 1:268113/1‑251 (MQ=255) aaaaGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAAc < 1:476628/251‑1 (MQ=255) ctctTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTcc < 1:536779/215‑1 (MQ=255) ctctTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTAttttt > 1:888537/1‑249 (MQ=255) ctctTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTAttttt > 1:156285/1‑249 (MQ=255) ctctTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTtttc < 1:628218/250‑1 (MQ=255) ctTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGGTTTGCTTAAGGCAAACAGCAGAATGCCACTGGtt > 1:449448/1‑204 (MQ=255) ctTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTtttcttt > 1:751572/1‑251 (MQ=255) ctTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTtttcttt > 1:22632/1‑251 (MQ=255) cAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGgcgc < 1:763991/250‑1 (MQ=255) cAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGgcgc < 1:347487/250‑1 (MQ=255) tttCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCat > 1:400864/1‑251 (MQ=255) tGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCataata < 1:549784/251‑1 (MQ=255) tGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTCTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCataata < 1:795236/251‑1 (MQ=255) gCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCATAatat < 1:395049/250‑1 (MQ=255) gTTTTCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGc > 1:642562/1‑144 (MQ=255) tttCCCAATCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCATAATATTGCGGCTGATTg > 1:71119/1‑251 (MQ=255) tCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCATAATATTGCGGCTGATTGCCCGGCa > 1:765519/1‑250 (MQ=255) tCGCAAATGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCATAATATTGCGGCTGATTGCCCGGCAc < 1:293095/251‑1 (MQ=255) aaTGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTACCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCataata > 1:449177/1‑225 (MQ=255) aTGAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCATAATATTGCGGCTGATTGCCCGGCACCGAaag < 1:139438/251‑1 (MQ=255) gAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCgg > 1:228263/1‑171 (MQ=255) gAGCGGCAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCataata > 1:712750/1‑222 (MQ=255) | GGCATAAGCGGGGCGAGAGGGCTTTGGCTTGTGGGTGGGCGTAGAATTTATCGCCTAAAATCGGGTGTCCGAGCGCCAGCATGTGCAGGCGTAATTGATGGGAGCGACCGGTAATCGGCGTGAGTTTTATGCGGGTGGTGTTATTTGGATAACGCTGCAAAACGTCGTAAAAAGTGACCGCTCTTTTTCCCCGTTCGAAGCAAATTTTCTGGCGTGGGCGGTTTTCCCAATCGCAAATGAGCGGTAATTCCACCATACCTTGCTCTTGTTCCAAATGCCCCCAAACCAGCGCCTGATAATATTTTTTCGGTTCGCGTTCGCGAAATTGACGTTTTAATTCGCGATCCGCCGATTTGCTTAAGGCAAACAGCAGAATGCCACTGGTTGCCATGTCCAGCCGGTGTGCCGGTTCGCAAAAACCGTATTTTTCTTTCACCCGCGACATGGCGCTGTCATAATATTGCGGCTGATTGCCCGGCACCGAAAG > 3/30936‑31422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |