Predicted mutation
evidence seq id position mutation annotation gene description
RA 3 894 T→C intergenic (–/‑353) – / → unknown –/DNA transformation protein TfoX

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*38940TC100.0% 219.8 / NA 79intergenic (–/‑353)–/unknown–/DNA transformation protein TfoX
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (42/37);  total (42/37)

GATTATCTACATTACTGCCCTTAGAGTTAATATTTAGGGCATAAAACTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCTGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGGTGTTATTCTTTGACACCTTTGGTTCTA  >  3/647‑1110
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                        
gATTATCTACATTACTGCCCTTAGAGTTAATATTTAGGGCATAAAACTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGAt                                                                                                                                                                                                                       >  1:180578/1‑251 (MQ=255)
    aTCTACATTACTGCCCTTAGAGTTAATATTTAGGGCATAAAACTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGAt                                                                                                                                                                                                                   >  1:462537/1‑251 (MQ=255)
                gCCCTTAGAGTTAATATTTAGGGCATAAAACTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCtt                                                                                                                                                                                                        >  1:288622/1‑250 (MQ=255)
                 cccTTAGAGTTAATATTTAGGGCATAAAACTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCa                                                                                                                                                                                                      >  1:58107/1‑251 (MQ=255)
                         gTTAATATTTAGGGCATAAAACTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCAtt                                                                                                                                                                                              >  1:368067/1‑251 (MQ=255)
                                           aaaCTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAagag                                                                                                                                                                            >  1:416275/1‑251 (MQ=255)
                                                    aGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGa                                                                                                                                                                                    >  1:525033/1‑234 (MQ=255)
                                                     gTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAatat                                                                                                                                                                                                  <  1:84186/219‑1 (MQ=255)
                                                     gTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAag                                                                                                                                                                              <  1:148113/239‑1 (MQ=255)
                                                     gTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAaaga                                                                                                                                                                  >  1:48167/1‑251 (MQ=255)
                                                          tAGTTAACTAATTGAAAATAAAAGTGAACAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATAGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTg                                                                                                                                                             >  1:272417/1‑251 (MQ=255)
                                                               aaCTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGAt                                                                                                                                                                                   >  1:569481/1‑224 (MQ=255)
                                                                        aaaaTAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTc                                                                                                                                               <  1:670876/251‑1 (MQ=255)
                                                                             aaaaGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAAc                                                                                                                                          <  1:490733/251‑1 (MQ=255)
                                                                                        gTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGAccc                                                                                                                                                                                                              >  1:99396/1‑172 (MQ=255)
                                                                                        gTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAatat                                                                                                                                                                                                  >  1:459487/1‑184 (MQ=255)
                                                                                        gTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAaagaag                                                                                                                                                                >  1:740116/1‑218 (MQ=255)
                                                                                        gTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCgg                                                                                                                                >  1:856821/1‑250 (MQ=255)
                                                                                                   gtgtTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAAt                                                                                                                    >  1:610334/1‑251 (MQ=255)
                                                                                                     gtTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATc                                                                                                                                                                                                 >  1:59453/1‑172 (MQ=255)
                                                                                                     gtTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAag                                                                                                                                                                              >  1:314589/1‑191 (MQ=255)
                                                                                                     gtTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGtt                                                                                                                                                              <  1:67018/207‑1 (MQ=255)
                                                                                                      ttCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTTCATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTa                                                                                                                 >  1:143795/1‑251 (MQ=255)
                                                                                                      ttCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCAt                                                                                                                                                                                               <  1:325891/173‑1 (MQ=255)
                                                                                                      ttCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTa                                                                                                                 >  1:254717/1‑251 (MQ=255)
                                                                                                                        gTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAaaga                                                                                                                                                                  <  1:210173/184‑1 (MQ=255)
                                                                                                                              gTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGt                                                                                                                                                     <  1:636994/191‑1 (MQ=255)
                                                                                                                               tttAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATg                                                                                         <  1:380200/250‑1 (MQ=255)
                                                                                                                                       gCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAatat                                                                                                                                                                                                  <  1:852239/137‑1 (MQ=255)
                                                                                                                                            ttATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGaa                                                                                                                                     >  1:153058/1‑193 (MQ=255)
                                                                                                                                             tATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGGGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAAt                                                                          <  1:444466/251‑1 (MQ=255)
                                                                                                                                                tGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTg                                                                       >  1:792283/1‑251 (MQ=255)
                                                                                                                                                 gCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGa                                                                                                                                                                                    <  1:553510/141‑1 (MQ=255)
                                                                                                                                                  cTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTggg                                                                     <  1:636486/251‑1 (MQ=255)
                                                                                                                                                  cTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTggg                                                                     <  1:188454/251‑1 (MQ=255)
                                                                                                                                                  cTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTggg                                                                     <  1:276151/251‑1 (MQ=255)
                                                                                                                                                    tACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGAt                                                                   >  1:524194/1‑251 (MQ=255)
                                                                                                                                                      cATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGCTTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAAt                                                                          >  1:442543/1‑242 (MQ=255)
                                                                                                                                                      cATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAAttt                                                                                                                  >  1:800151/1‑202 (MQ=255)
                                                                                                                                                          gATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGa                                                              >  1:746104/1‑250 (MQ=255)
                                                                                                                                                              gTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAaagaag                                                                                                                                                                <  1:250559/148‑1 (MQ=255)
                                                                                                                                                              gTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGAc                                                             <  1:601049/247‑1 (MQ=255)
                                                                                                                                                              gTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACaaaa                                                         >  1:319530/1‑251 (MQ=255)
                                                                                                                                                                     aGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAagag                                                                                                                                                                            >  1:180344/1‑129 (MQ=255)
                                                                                                                                                                      ggTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTc                                                                                                                                               <  1:667421/157‑1 (MQ=255)
                                                                                                                                                                          tttCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATgg                                                                                                              >  1:800698/1‑186 (MQ=255)
                                                                                                                                                                          tttCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGt                                                                                                             <  1:695535/187‑1 (MQ=255)
                                                                                                                                                                            tCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGc                                           <  1:272559/251‑1 (MQ=255)
                                                                                                                                                                             cTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCt                                          <  1:199218/251‑1 (MQ=255)
                                                                                                                                                                                   cGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATc                                     <  1:683578/250‑1 (MQ=255)
                                                                                                                                                                                      cTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCt                                 <  1:849716/251‑1 (MQ=255)
                                                                                                                                                                                      cTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCt                                 <  1:863319/251‑1 (MQ=255)
                                                                                                                                                                                         aTGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCa                                                                                                                                                                                                <  1:140880/89‑1 (MQ=255)
                                                                                                                                                                                         aTGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAAc                                                                                                                                          <  1:33862/143‑1 (MQ=255)
                                                                                                                                                                                         aTGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTggg                                                                     >  1:466007/1‑212 (MQ=255)
                                                                                                                                                                                         aTGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAg                              >  1:335022/1‑251 (MQ=255)
                                                                                                                                                                                          tGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAgg                             >  1:586981/1‑251 (MQ=255)
                                                                                                                                                                                            ttAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGgtg                           <  1:59042/251‑1 (MQ=255)
                                                                                                                                                                                            ttAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGgtg                           <  1:748370/251‑1 (MQ=255)
                                                                                                                                                                                              aGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAgg                                                               >  1:810156/1‑213 (MQ=255)
                                                                                                                                                                                               gATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGAc                                                             <  1:70605/214‑1 (MQ=255)
                                                                                                                                                                                               gATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCt                                 >  1:513355/1‑242 (MQ=255)
                                                                                                                                                                                               gATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGGTGTTa                        >  1:664353/1‑251 (MQ=255)
                                                                                                                                                                                                   aTCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAAc                                                                                                                                          <  1:26271/133‑1 (MQ=255)
                                                                                                                                                                                                   aTCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCt                                 <  1:459550/238‑1 (MQ=255)
                                                                                                                                                                                                      aCTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCt                                 <  1:546919/235‑1 (MQ=255)
                                                                                                                                                                                                      aCTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAgg                             >  1:230066/1‑239 (MQ=255)
                                                                                                                                                                                                      aCTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGGTGTTATTCTTTg                 >  1:333113/1‑251 (MQ=255)
                                                                                                                                                                                                                   gATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAag                                                                                                                                                                              >  1:206738/1‑81 (MQ=255)
                                                                                                                                                                                                                   gATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGt                                                                                                                                                     >  1:62690/1‑106 (MQ=255)
                                                                                                                                                                                                                   gATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGaaa                                                     >  1:520371/1‑202 (MQ=255)
                                                                                                                                                                                                                   gATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCt                                 >  1:392572/1‑222 (MQ=255)
                                                                                                                                                                                                                   gATTTATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGGTGTTATTCTTTGac               <  1:647560/240‑1 (MQ=255)
                                                                                                                                                                                                                     tttATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGGTTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGGTGTTATTCTTTGACACCTTTGGTTCTa  >  1:224231/1‑251 (MQ=255)
                                                                                                                                                                                                                     tttATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAAtt                                                                                                                   <  1:410535/138‑1 (MQ=255)
                                                                                                                                                                                                                     tttATTGTGTGATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCt                                 <  1:881399/220‑1 (MQ=255)
                                                                                                                                                                                                                           gtgtgATCAGAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATc                                     <  1:809569/210‑1 (MQ=255)
                                                                                                                                                                                                                                    gAAAACATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGc                                           >  1:493253/1‑195 (MQ=255)
                                                                                                                                                                                                                                        aCATAATTGTATTTCCGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTggg                                                                     <  1:879990/165‑1 (MQ=255)
                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                        
GATTATCTACATTACTGCCCTTAGAGTTAATATTTAGGGCATAAAACTACCTAGTATTTAGTTAACTAATTGAAAATAAAAGTGAAAAGTTTTGGATGAGTGTTCTAACGGAGATTCAAAGTTGAAGTTTAAAAAGCTTTTTATTGCTTACATAGATGGTTTGAAAGGTTTTTCTAAGGCGACTAATGTTAGATAATCACTTAATAGCGAGGATTTATTGTGTGATCAGAAAACATAATTGTATTTCTGATAGATGACCCCGCCTTCAATATCATTTGGTTAGGGATTAAAGAGGCAGTAAAGAAGTTGGATAATGTTGATTCAGAACCGGAAATCGGCGATGAATCAATTTATGGTTGATTTTCGGAGTTGAAATGAGGGCCGCACAGAATTTGGGATAAGGACAAAAGAAATAATTTACGCTATATCTGCTAAGGTGTTATTCTTTGACACCTTTGGTTCTA  >  3/647‑1110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑