| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 2 | 140,160 | T→G | intergenic (+1/‑3) | unknown → / → unknown | YheO‑like PAS domain/tRNA 5‑methylaminomethyl‑2‑thiouridine synthase subunit TusD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 2 | 140,160 | 0 | T | G | 100.0% | 231.9 / NA | 82 | intergenic (+1/‑3) | unknown/unknown | YheO‑like PAS domain/tRNA 5‑methylaminomethyl‑2‑thiouridine synthase subunit TusD |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (44/38); total (44/38) | |||||||||||
TGAATTTTGCCAGCTCGGTGGAAGAACTGGTAGTGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAATTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCATTTGTGCGTTGCCGCCGC > 2/139918‑140404 | tGAATTTTGCCAGCTCGGTGGAAGAACTGGTAGTGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGAt < 1:746812/251‑1 (MQ=255) gAATTTTGCCAGCTCGGTGGAAGAACTGGTAGTGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGAtt > 1:405326/1‑251 (MQ=255) gCTCGGTGGAAGAACTGGTAGTGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTtggtg > 1:81084/1‑251 (MQ=255) gaaCTGGTAGTGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAaacaac > 1:588289/1‑250 (MQ=255) gTGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGAt < 1:68735/219‑1 (MQ=255) tGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGt < 1:272581/251‑1 (MQ=255) tGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGt < 1:343242/251‑1 (MQ=255) tGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGt < 1:109053/251‑1 (MQ=255) cTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCaa > 1:361358/1‑251 (MQ=255) tgGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGgc < 1:447757/251‑1 (MQ=255) gggTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTtgg < 1:387691/218‑1 (MQ=255) gggTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGgcg > 1:497958/1‑251 (MQ=255) aaCCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTc < 1:94468/251‑1 (MQ=255) ccATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGttt > 1:720605/1‑248 (MQ=255) aTCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGt < 1:146226/250‑1 (MQ=255) tCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTAc < 1:232592/251‑1 (MQ=255) tggtggCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTg < 1:568957/251‑1 (MQ=255) gtggCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCa > 1:598390/1‑251 (MQ=255) cGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCaaaa < 1:378686/250‑1 (MQ=255) cGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAg < 1:160974/251‑1 (MQ=255) aCAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATc < 1:826405/251‑1 (MQ=255) aCAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATc < 1:56459/251‑1 (MQ=255) aCAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATc < 1:107259/251‑1 (MQ=255) aaaTCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCTACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGcc < 1:504988/251‑1 (MQ=255) gCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAAt > 1:490885/1‑250 (MQ=255) ctGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGt > 1:414877/1‑165 (MQ=255) gTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTAc < 1:188176/203‑1 (MQ=255) tATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGt < 1:611854/251‑1 (MQ=255) ggCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACgg > 1:150610/1‑251 (MQ=255) tCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGcc < 1:249513/251‑1 (MQ=255) aCATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTa < 1:687019/182‑1 (MQ=255) aCATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAg > 1:770161/1‑194 (MQ=255) aTTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTTTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGt > 1:720432/1‑251 (MQ=255) ttAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGtt < 1:530941/251‑1 (MQ=255) aCGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATcc < 1:706639/250‑1 (MQ=255) tATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGt > 1:487344/1‑240 (MQ=255) aTTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACgg < 1:746157/124‑1 (MQ=255) gAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTgg > 1:487674/1‑133 (MQ=255) gAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATcc > 1:795555/1‑230 (MQ=255) tctcAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACg < 1:616972/236‑1 (MQ=255) tcAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCaa > 1:101174/1‑251 (MQ=255) cAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGAt > 1:410621/1‑73 (MQ=255) cAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATcc > 1:61546/1‑222 (MQ=255) atatTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAGCCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGcc < 1:594063/251‑1 (MQ=255) tttCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTgg > 1:191117/1‑251 (MQ=255) tcGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTAc > 1:467318/1‑137 (MQ=255) tcGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGaattt > 1:877204/1‑229 (MQ=255) tcGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTggcagg > 1:735166/1‑251 (MQ=255) cGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGt > 1:583591/1‑206 (MQ=255) gTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGcc > 1:760089/1‑159 (MQ=255) gTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTggcaggca > 1:855713/1‑251 (MQ=255) aCCGTGTATTTATATATTCGTCAAATTAATCAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTc < 1:37377/94‑1 (MQ=255) aCCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATc > 1:322460/1‑169 (MQ=255) gtgtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGGTGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCg > 1:436550/1‑251 (MQ=255) gtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAGGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGcac < 1:338107/119‑1 (MQ=255) gtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTtggtgg > 1:13397/1‑65 (MQ=255) gtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTc < 1:807946/89‑1 (MQ=255) gtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCATCTGGCACAAGTACTGGTGCAAAAGCTTCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGt > 1:59954/1‑250 (MQ=255) gtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCatat > 1:407698/1‑144 (MQ=255) gtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCATCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTggca > 1:3298/1‑237 (MQ=255) gtATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGt > 1:806898/1‑250 (MQ=255) aTTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTa < 1:615986/122‑1 (MQ=255) aTTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCaa > 1:116650/1‑251 (MQ=255) tttATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCatat < 1:209115/141‑1 (MQ=255) tttATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCa > 1:210346/1‑176 (MQ=255) tttATATATTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAAt > 1:806052/1‑251 (MQ=255) atatTCGTCAAATTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTaa > 1:273206/1‑250 (MQ=255) aaaTTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACg > 1:590416/1‑243 (MQ=255) aaTTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTg > 1:627075/1‑250 (MQ=255) aaTTAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGc < 1:770946/251‑1 (MQ=255) ttAAACAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCac < 1:675777/251‑2 (MQ=255) cAAGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGaatttaat < 1:670399/195‑1 (MQ=255) aGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTggcagg < 1:330954/212‑1 (MQ=255) aGATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCACTTGTGCg > 1:357013/1‑251 (MQ=255) gATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCACTTGTGCGt > 1:102954/1‑251 (MQ=255) gATCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCACTTGTGCGt > 1:737420/1‑251 (MQ=255) aTCAGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCACTTGTGCGtt > 1:97041/1‑251 (MQ=255) aGGATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGcc < 1:821303/117‑1 (MQ=255) ggATGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATc < 1:311338/112‑1 (MQ=255) aTGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCACTTGTGCGTTgccgc < 1:657504/250‑1 (MQ=255) tGAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAg > 1:385872/1‑51 (MQ=255) gAATAAGTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCACTTGTGCGTTgccgttgg > 1:569738/1‑247 (MQ=255) | TGAATTTTGCCAGCTCGGTGGAAGAACTGGTAGTGCAAACTGTGGGTAAAACCATTGAGGAGATTACTGCCGATCGCATGGTGGCGAATAATAACAAAAATCGCCAAATTGTCGTTTCTCTGTATGAAAAAGGCATTTTCGACATTAAAGACGCTATCAATTTAGTGGCGGAGCGTCTCAATATTTCTCGTCATACCGTGTATTTATATATTCGTCAAATTAAACAAGATCAGGATGAATAATTCATGGATTATGTGTTGGTGGTGAAACAACCGGTTTACGGTAGTCAAGGCGCGTTTCTGGCGTACCAACTGGCACAAGTACTGGTGCAAAAGCATCATATCAGCCAAATCTTTTTTTATCAGGATGGCGTAACCAACGGCAACGCCTTGGTTTATCCCGCTAATGACGAATTTAATTTGGTCCAAGCCTGGCAGGCATTTTCCCGTCAATTTAACGTGCCGCTGCATTTGTGCGTTGCCGCCGC > 2/139918‑140404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |