| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 2 | 123,532 | T→G | I389I (ATA→ATC) | unknown ← | tRNA‑5‑carboxymethylaminomethyl‑2‑ thiouridine(34) synthesis protein MnmG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 2 | 123,532 | 0 | T | G | 100.0% | 215.1 / NA | 79 | I389I (ATA→ATC) | unknown | tRNA‑5‑carboxymethylaminomethyl‑2‑ thiouridine(34) synthesis protein MnmG |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (48/31); total (48/31) | |||||||||||
ATTAAAACGCGCCCAACGCGCTTCATCAATTAAACCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTTATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGATTCCGTT > 2/123298‑123771 | aTTAAAACGCGCCCAACGCGCTTCATCAATTAAACCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTaa > 1:754907/1‑249 (MQ=255) gacagcAACGCGCTTCATCAATTAAACCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGc < 1:417905/245‑1 (MQ=255) aaTTAAACCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCgg > 1:773049/1‑251 (MQ=255) aTTAAACCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGt > 1:732330/1‑251 (MQ=255) aTTAAACCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGt < 1:600252/251‑1 (MQ=255) aCCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTtgtg > 1:510136/1‑250 (MQ=255) ttCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTaa > 1:898811/1‑251 (MQ=255) ttCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTaa > 1:301455/1‑251 (MQ=255) gCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAg > 1:31192/1‑251 (MQ=255) atatCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCa > 1:819714/1‑180 (MQ=255) aacaacAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGt < 1:749298/251‑1 (MQ=255) acaaGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGt > 1:83824/1‑251 (MQ=255) atatTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt > 1:240818/1‑251 (MQ=255) atatTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt < 1:814228/251‑1 (MQ=255) atatTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCACTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt > 1:803356/1‑251 (MQ=255) cACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGa > 1:710116/1‑251 (MQ=255) aaGTAAACACACGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCaaaa > 1:584862/1‑251 (MQ=255) tAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAaat < 1:328865/249‑1 (MQ=255) atatGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACTCACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAAc > 1:243312/1‑152 (MQ=255) atatGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTc < 1:434006/249‑1 (MQ=255) tatGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAAt < 1:857999/251‑1 (MQ=255) ttCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGt < 1:620158/251‑1 (MQ=255) ttCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGt < 1:396428/251‑1 (MQ=255) cTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTaa < 1:407103/202‑1 (MQ=255) cTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt < 1:375871/216‑1 (MQ=255) cTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCg > 1:842992/1‑236 (MQ=255) gTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAAt < 1:171415/171‑1 (MQ=255) gTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAAt < 1:845996/171‑1 (MQ=255) gTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt > 1:631996/1‑211 (MQ=255) gTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCgg > 1:801176/1‑251 (MQ=255) tACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAAcc > 1:412078/1‑115 (MQ=255) cAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAAccc > 1:591455/1‑245 (MQ=255) ggTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt < 1:803581/203‑1 (MQ=255) gTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGGGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGAt > 1:446151/1‑251 (MQ=255) gTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCg > 1:719275/1‑222 (MQ=255) gTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGa < 1:261297/250‑1 (MQ=255) aaGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTg > 1:613906/1‑251 (MQ=255) tcatcCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCtt > 1:293504/1‑251 (MQ=255) tcCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTc < 1:82241/215‑1 (MQ=255) tcCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCtttt > 1:602501/1‑250 (MQ=255) acacacCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt > 1:254729/1‑183 (MQ=255) cacCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGTCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt > 1:266844/1‑180 (MQ=255) cacCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAAcc > 1:407152/1‑217 (MQ=255) cacCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCttt > 1:859908/1‑250 (MQ=255) cacCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCttt > 1:774254/1‑250 (MQ=255) cgaaTATAAGCCTGAGGGCGACGTGGGAACCGGGCATCTTTTTAAGGCAGATAAAGCCCGGCGCTGATAGCGGCAAGTAGCAAGTGTGCCGCTGCTTATTCATAACAGGTTGTGCCGTTAGGGTGACCGGCAAAGAATAAACCGGAGATCGAGTTGGTTTCTAAGGTCGGTTTgagag < 1:319821/176‑2 (MQ=255) ccAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCAt < 1:856018/251‑1 (MQ=255) aaTATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTgg > 1:622188/1‑155 (MQ=255) aaTATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTgg > 1:862294/1‑155 (MQ=255) aaTATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt < 1:64911/176‑1 (MQ=255) aaTATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATgg < 1:402771/251‑1 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATgg < 1:850210/205‑1 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATgg > 1:237964/1‑205 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAAc > 1:894464/1‑241 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGa > 1:440591/1‑251 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGa > 1:249414/1‑251 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGa > 1:253965/1‑251 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGa > 1:125403/1‑251 (MQ=255) atatAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGa > 1:440805/1‑251 (MQ=255) tataAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGt > 1:699220/1‑106 (MQ=255) aGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAaat < 1:388017/185‑1 (MQ=255) ccTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACg < 1:154298/251‑1 (MQ=255) gATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGAt < 1:444633/165‑1 (MQ=255) acgacgTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCa < 1:125305/251‑1 (MQ=255) cgTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTg > 1:867313/1‑251 (MQ=255) gTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTg > 1:241107/1‑250 (MQ=255) tCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTaa < 1:454151/128‑1 (MQ=255) tCTTTTTCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTc > 1:468708/1‑167 (MQ=255) ttCCTGCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACtgg < 1:540078/251‑1 (MQ=255) gCACATAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGACGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATcccc > 1:708509/1‑221 (MQ=255) acaTAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGAt > 1:678628/1‑251 (MQ=255) acaTAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGAt > 1:580649/1‑251 (MQ=255) acaTAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGACTTTTCCAATCCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGAt < 1:102782/251‑1 (MQ=255) caTAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATg < 1:179631/203‑1 (MQ=255) caTAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGc < 1:47718/224‑1 (MQ=255) caTAAAGCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGAtt > 1:547958/1‑251 (MQ=255) gCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTgaga > 1:157559/1‑122 (MQ=255) gCCCGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTTATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGATTCCGtt > 1:267117/1‑250 (MQ=255) cccGGCGTTGATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGATTCCGtt < 1:144589/249‑1 (MQ=255) | ATTAAAACGCGCCCAACGCGCTTCATCAATTAAACCTAATTCGTGCGCAATCGGCGTTAAACGAATATCGGCGTTATCTTCACGTAACAACAAGCGATATTCCGCACGGGAAGTAAACACGCGATATGGTTCTTTAGTACCAAGGGTGCAAAGATCATCCACCAACACACCAATATAAGCCTGATCACGACGTGGGAACCAGGCATCTTTTTCCTGCACATAAAGCCCGGCGTTTATCCCGGCAAGTAAACCTTGTGCCGCTGCTTCTTCATAACCGGTTGTGCCGTTAATTTGACCGGCAAAGAATAAACCGGAGATCGCTTTGGTTTCTAAGGTCGGTTTGAGATCACGCGGATCAAAATAATCGTATTCAATGGCGTAACCCGGTTTGACGATTCGTGCCTTTTCCAAACCTTTCATGGAATTCACGATCCCCATTTGCACATCAAACGGCAAACTGGTGGAGATTCCGTT > 2/123298‑123771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |