Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	2	121,409	G→A	T40T (ACC→ACT)	unknown ←	Redox‑sensing transcriptional regulator QorR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	2	121,409	0	G	A	100.0%	154.8 / NA	58	T40T (ACC→ACT)	unknown	Redox‑sensing transcriptional regulator QorR
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (26/32);  total (26/32)

TTTTTCGCCTGTTGCTGCAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTGGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAGTAAGTAATGTAATTATAGTTGCTATTGAATAATAC  >  2/121173‑121646                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                              tttttCGCCTGTTGCTGCAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAg                                                                                                                                                                                                                                 <  1:543607/251‑1 (MQ=255)         cTGTTGCTGCAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTcacca                                                                                                                                                                                                                         <  1:184405/251‑1 (MQ=255)            ttGCTGCAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTcaccaac                                                                                                                                                                                                                       <  1:63469/250‑1 (MQ=255)             tgctgcAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCGATTCGCTAAAACGTTTAGTACCGGAATACAGACTcaccaacac                                                                                                                                                                                                                     <  1:540794/251‑1 (MQ=255)               ctgcAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTcaccaacacc                                                                                                                                                                                                                    <  1:760775/250‑1 (MQ=255)                 gcAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGaa                                                                                                                                                                                                                                      >  1:812284/1‑230 (MQ=255)                  cAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCaaaa                                                                                                                                                                                                                <  1:672279/251‑1 (MQ=255)                   aaaaTCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAAc                                                                                                                                                                                                               <  1:502885/251‑1 (MQ=255)                             ttAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACgg                                                                                                                                                                                                     <  1:881777/251‑1 (MQ=255)                                  ttCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACggttggt                                                                                                                                                                                                <  1:622772/251‑1 (MQ=255)                                      tttCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTaaa                                                                                                                                                                                            <  1:626411/251‑1 (MQ=255)                                         ccAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGc                                                                                                                                                                                         <  1:31387/251‑1 (MQ=255)                                             ccAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGa                                                                                                                                                                                                                                >  1:289214/1‑208 (MQ=255)                                              cAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGAc                                                                                                                                                                                                                               >  1:752137/1‑208 (MQ=255)                                                       aaTTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCg                                                                                                                                                                           >  1:350307/1‑251 (MQ=255)                                                        aTTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTcaccaacacc                                                                                                                                                                                                                    >  1:339432/1‑209 (MQ=255)                                                        aTTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGt                                                                                                                                                                          >  1:539942/1‑251 (MQ=255)                                                               cATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTAc                                                                                                                                                                                                                                           <  1:368171/179‑1 (MQ=255)                                                                    tACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCt                                                                                                                                                              <  1:607794/251‑1 (MQ=255)                                                                          aCGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGc                                                                                                                                                         <  1:888962/250‑1 (MQ=255)                                                                          aCGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGc                                                                                                                                                         <  1:595321/250‑1 (MQ=255)                                                                               tCCGAACCAGATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAAc                                                                                                                                                   <  1:275644/251‑1 (MQ=255)                                                                               tCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAAc                                                                                                                                                   <  1:38193/251‑1 (MQ=255)                                                                                      cAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCa                                                                                                                                            <  1:361154/251‑1 (MQ=255)                                                                                         aTTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCATTTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGt                                                                                                                                         <  1:843052/251‑1 (MQ=255)                                                                                                                          cTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTaaaa                                                                                                        >  1:133496/1‑251 (MQ=255)                                                                                                                            gtgtTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACgg                                                                                                                                                                                                     >  1:177118/1‑156 (MQ=255)                                                                                                                            gtgtTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGc                                                                                                                                              >  1:217573/1‑211 (MQ=255)                                                                                                                            gtgtTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAAt                                                                                                      >  1:379210/1‑251 (MQ=255)                                                                                                                              gtTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAAc                                                                                                                                                                                                       >  1:10665/1‑152 (MQ=255)                                                                                                                              gtTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGc                                                                                                                                                                                         >  1:626223/1‑166 (MQ=255)                                                                                                                              gtTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGc                                                                                                                                                                                         <  1:638439/166‑1 (MQ=255)                                                                                                                              gtTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAatat                                                                                                                               >  1:872196/1‑224 (MQ=255)                                                                                                                                               cTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCt                                                                                                                                                              >  1:150234/1‑176 (MQ=255)                                                                                                                                               cTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAaaataaat                                                                                   >  1:16103/1‑251 (MQ=255)                                                                                                                                                 aaCATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAAtaaattt                                                                                 >  1:577775/1‑251 (MQ=255)                                                                                                                                                              cTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGaa                                                                                                                                                                                                                                      >  1:421490/1‑89 (MQ=255)                                                                                                                                                              cTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCt                                                                                                                                                              >  1:121073/1‑161 (MQ=255)                                                                                                                                                              cTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCaa                                                                    >  1:238154/1‑251 (MQ=255)                                                                                                                                                                       cTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTAc                                                                                                                                                                                                                                           >  1:75116/1‑75 (MQ=255)                                                                                                                                                                               gTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTaa                                                                                                                                                                                    >  1:455441/1‑122 (MQ=255)                                                                                                                                                                               gTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCACGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTaa                                                   >  1:280351/1‑251 (MQ=255)                                                                                                                                                                                tCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAg                                                  <  1:609107/251‑1 (MQ=255)                                                                                                                                                                                   tCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTAc                                               <  1:18155/251‑1 (MQ=255)                                                                                                                                                                                    cGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAatat                                                                                                                               <  1:394118/170‑1 (MQ=255)                                                                                                                                                                                              cGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAaag                                     <  1:753872/250‑1 (MQ=255)                                                                                                                                                                                                ctcactcaCACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGAc                                                                                                                                                                   <  1:356196/122‑1 (MQ=255)                                                                                                                                                                                                ctcactcaCACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTAGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAaagtaa                                  >  1:228457/1‑251 (MQ=255)                                                                                                                                                                                                  cactcacACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCt                                                                                                             <  1:70662/174‑1 (MQ=255)                                                                                                                                                                                                    ctcacACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGcc                                                                                                                                                        <  1:745246/129‑1 (MQ=255)                                                                                                                                                                                                    ctcacACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAaag                                     <  1:132106/244‑1 (MQ=255)                                                                                                                                                                                                    ctcacACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAgtaagtaa                              >  1:458537/1‑251 (MQ=255)                                                                                                                                                                                                    ctcacACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAgtaagtaa                              >  1:440339/1‑251 (MQ=255)                                                                                                                                                                                                         acCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAGTAAgtaatgtaa                         <  1:182618/251‑1 (MQ=255)                                                                                                                                                                                                          ccGTCAATGGCGCGACGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAGTAAgtaatgtaat                        >  1:374903/1‑251 (MQ=255)                                                                                                                                                                                                                        aCGCAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAGTAAGTAATGTAATTATAGTTGCTATTg          <  1:168811/251‑1 (MQ=255)                                                                                                                                                                                                                           cAATTCGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAGTAAGTAATGTAATTATAGTTGCTATTGaat       <  1:9983/251‑1 (MQ=255)                                                                                                                                                                                                                                cGCTAAAACGTTTAGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAGTAAGTAATGTAATTATAGTTGCTATTGAATAATAc  <  1:631863/251‑1 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                              TTTTTCGCCTGTTGCTGCAAAATCCCGGTTAAATTCGTTTCCAGCCAATCCACCAATTCAAACATTTTACTTGACGCCTCCGAACCAAATTCCGTCAGCGTGTAATCCACTTGCGGCGGCACTGTGTTATAGGATTTGCGAACTAACATACCGTCCGCTTCCAATTCTTGTAAGGTCTTCGTCAGCATTCGCTCACTCACACCGTCAATGGCGCGACGCAATTCGCTAAAACGTTTGGTACCGGAATACAGACTCACCAACACCAAAACGCCCCAACGGTTGGTTAAATGCTGTAAAATTTGGCGTGAAGGACAATCTGAAGCCAAAACATTGCCACGTTCAAAAATATTTTCCATTTTTATTTCCTTAAAAATCAATTTATTAAAAATAAATTTAAATTTATTCCAAAACTTACGTTTATGTAAGTACTTCTCAAAAGTAAGTAATGTAATTATAGTTGCTATTGAATAATAC  >  2/121173‑121646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑