Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 337,276 G→A T86T (ACG→ACA)  unknown → Holliday junction ATP‑dependent DNA helicase RuvB (EC 3.6.4.12)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1337,2760GA100.0% 150.1 / NA 56T86T (ACG→ACA) unknownHolliday junction ATP‑dependent DNA helicase RuvB (EC 3.6.4.12)
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (30/26);  total (30/26)

GACAGAATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACGTCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCTATTAAATTGGATTTACCTCCTTTTACGCTTATCGGTGCAACCACCCGTGCGGGCTCTTTAACC  >  1/337031‑337522
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
gacagaATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAgg                                                                                                                                                                                                                                                   >  1:274320/1‑251 (MQ=255)
    gaATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAg                                                                                                                                                                                                                                                    >  1:190957/1‑246 (MQ=255)
    gaATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGccc                                                                                                                                                                                                                                                >  1:149166/1‑250 (MQ=255)
    gaATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGccc                                                                                                                                                                                                                                                >  1:265310/1‑250 (MQ=255)
    gaATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGc                                                                                                                                                                                                                                                  <  1:15556/248‑1 (MQ=255)
    gaATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGCATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGccc                                                                                                                                                                                                                                                >  1:203327/1‑250 (MQ=255)
     aaTTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGc                                                                                                                                                                                                                                                  <  1:133870/247‑1 (MQ=255)
     aaTTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGc                                                                                                                                                                                                                                                  >  1:738225/1‑247 (MQ=255)
              tGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGaa                                                                                                                                                                                                                                      <  1:831917/250‑1 (MQ=255)
              tGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGaa                                                                                                                                                                                                                                      <  1:198736/250‑1 (MQ=255)
                         aaTTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGAt                                                                                                                                                                                                                          >  1:165271/1‑251 (MQ=255)
                                       gTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGtt                                                                                                                                                                                                            >  1:91312/1‑251 (MQ=255)
                                       gTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGtt                                                                                                                                                                                                            >  1:871601/1‑251 (MQ=255)
                                           tcgatcgTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGAcc                                                                                                                                                                                                        <  1:507785/251‑1 (MQ=255)
                                              atcgTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAAt                                                                                                                                                                                                     >  1:291124/1‑251 (MQ=255)
                                                cgTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCt                                                                                                                                                                                                   <  1:719505/251‑1 (MQ=255)
                                                 gTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAAt                                                                                                                                                                                                     >  1:188254/1‑248 (MQ=255)
                                                  tGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTgg                                                                                                                                                                                                 <  1:62042/251‑1 (MQ=255)
                                                     cATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGc                                                                                                                                                                                              <  1:897661/251‑1 (MQ=255)
                                                               aaaTTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCatgatg                                                                                                                                                                                     <  1:246915/250‑1 (MQ=255)
                                                                  ttGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGtgtt                                                                                                                                                                                 <  1:186312/251‑1 (MQ=255)
                                                                     cTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGaa                                                                                                                                                                                                                                      <  1:413520/195‑1 (MQ=255)
                                                                           gATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAg                                                                                                                                                                                                                                                    >  1:897656/1‑175 (MQ=255)
                                                                            aTTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATtga                                                                                                                                                                        <  1:565520/250‑1 (MQ=255)
                                                                              tATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGaa                                                                                                                                                                                                                                      >  1:51371/1‑186 (MQ=255)
                                                                               aTGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGc                                                                                                                                                                                              >  1:468860/1‑225 (MQ=255)
                                                                               aTGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGaa                                                                                                                                                                    >  1:71424/1‑251 (MQ=255)
                                                                                          ccGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTgttgtt                                                                                                                                                                              <  1:62198/230‑1 (MQ=255)
                                                                                              aGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCttt                                                                                                                                                       >  1:647771/1‑249 (MQ=255)
                                                                                              aGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCttt                                                                                                                                                       >  1:177156/1‑249 (MQ=255)
                                                                                               ggTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTtct                                                                                                                                                     >  1:89625/1‑250 (MQ=255)
                                                                                                         cAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTtctc                                                                                                                                                    <  1:226605/241‑1 (MQ=255)
                                                                                                          aaaTGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTgaa                                                                                                                                         >  1:464580/1‑251 (MQ=255)
                                                                                                            aTGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTgaaga                                                                                                                                       <  1:71625/251‑1 (MQ=255)
                                                                                                                      tcatcaAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTAt                                                                                                                             <  1:23535/251‑1 (MQ=255)
                                                                                                                      tcatcaAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTAt                                                                                                                             <  1:484739/251‑1 (MQ=255)
                                                                                                                                            tCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAg                                                                                                        <  1:605956/250‑1 (MQ=255)
                                                                                                                                               ggATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCt                                                                                                                                                                                                   >  1:641189/1‑156 (MQ=255)
                                                                                                                                                gATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCt                                                                                                      <  1:849982/248‑1 (MQ=255)
                                                                                                                                                         ggtCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGa                                                                                           <  1:879409/248‑1 (MQ=255)
                                                                                                                                                         gATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGa                                                                                           <  1:271823/250‑1 (MQ=255)
                                                                                                                                                            cATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGtgttg                                                                                                                                                                                >  1:351507/1‑162 (MQ=255)
                                                                                                                                                                    gATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCg                                                                                                                                                            <  1:742559/174‑1 (MQ=255)
                                                                                                                                                                      tttttGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCaa                                                                                                                      >  1:187653/1‑210 (MQ=255)
                                                                                                                                                                      tttttGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGC‑GGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCgg                                                                            >  1:387663/1‑251 (MQ=255)
                                                                                                                                                                               cgccgGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGt                                                                    >  1:315754/1‑251 (MQ=255)
                                                                                                                                                                                    ggTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCTAt                                                               >  1:504192/1‑251 (MQ=255)
                                                                                                                                                                                                        ggCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAggg                                                                                                                                                                                                                                                  >  1:292084/1‑51 (MQ=255)
                                                                                                                                                                                                        ggCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGttt                                                                                                                                                                             <  1:336644/121‑1 (MQ=255)
                                                                                                                                                                                                             atatTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGc                                                                               >  1:578368/1‑210 (MQ=255)
                                                                                                                                                                                                                                 ggCGTAAATATTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCTATTAAATTGGATTTACCTCCTTTTACGCTTATCGGTGCAACCACCCg                  >  1:227380/1‑251 (MQ=255)
                                                                                                                                                                                                                                        atatTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCTATTAAATTGGATTTACCTCCTTTTACGCTTATCGGTGCAacca                      >  1:525434/1‑240 (MQ=255)
                                                                                                                                                                                                                                        atatTCGCACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCTATTAAATTGGATTTACCTCCTTTTACGCTTATCGGTGCAACCACCCGTGCggg            >  1:459457/1‑250 (MQ=255)
                                                                                                                                                                                                                                               cACTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGc                                                                               <  1:526864/176‑1 (MQ=255)
                                                                                                                                                                                                                                               cACTACATCAGGCCCCGTGCTGG‑AAAAGCGGGGGATTTGGCGGCAATGTTGACCaa                                                                                                                                                                                                      <  1:276092/56‑1 (MQ=255)
                                                                                                                                                                                                                                                 cTACATCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCTATTAAATTGGATTTACCTCCTTTTACGCTTATCGGTGCAACCACCCGTGCGGGCTCTTTAAcc  <  1:796343/251‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
GACAGAATTATCAGTGCGACGGCAAAATTAGACGAGGATGTTATCGATCGTGCCATTCGCCCGAAATTGCTGGCGGATTATGTGGGGCAACCGCAGGTATGCGAGCAAATGGAGATTTTCATCAAGGCGGCAAAATTGCGTCAGGATGCGTTGGATCATTTGCTGATTTTTGGCCCGCCGGGTTTGGGAAAAACCACCTTGGCAAATATTGTTGCCAATGAAATGGGCGTAAATATTCGCACTACGTCAGGCCCCGTGCTGGAAAAAGCGGGGGATTTGGCGGCAATGTTGACCAATCTGGAGCCTCATGATGTGTTGTTTATTGATGAAATTCATCGTCTTTCTCCGGCGATTGAAGAAGTGCTTTATCCGGCAATGGAAGATTATCAGCTTGATATTATGATTGGCGAAGGGCCGGCAGCGCGTTCTATTAAATTGGATTTACCTCCTTTTACGCTTATCGGTGCAACCACCCGTGCGGGCTCTTTAACC  >  1/337031‑337522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑