Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 314,512 C→T H11H (CAC→CAT)  unknown → Octaprenyl diphosphate synthase (EC 2.5.1.90)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1314,5120CT100.0% 177.4 / NA 66H11H (CAC→CAT) unknownOctaprenyl diphosphate synthase (EC 2.5.1.90)
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (29/37);  total (29/37)

TAAATAGGGCGTGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCACGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATGTCGTCGATGAATCGGATATGCGT  >  1/314272‑314758
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      
taAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGc                                                                                                                                                                                                                                              <  1:126194/251‑1 (MQ=255)
  aaTAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCaa                                                                                                                                                                                                                                            <  1:357426/251‑1 (MQ=255)
                      gAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAAttt                                                                                                                                                                                                                         <  1:776295/250‑1 (MQ=255)
                          aaTTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGcc                                                                                                                                                                                                                    <  1:44579/251‑1 (MQ=255)
                           aTTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGcc                                                                                                                                                                                                                    >  1:520479/1‑250 (MQ=255)
                                     tAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAAttt                                                                                                                                                                                                                         >  1:406385/1‑235 (MQ=255)
                                     tAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACt                                                                                                                                                                                                          >  1:551820/1‑250 (MQ=255)
                                       gCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAAc                                                                                                                                                                                                           <  1:605544/247‑1 (MQ=255)
                                            aaTTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGAtgt                                                                                                                                                                                                   <  1:584823/250‑1 (MQ=255)
                                                             aTAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGtt                                                                                                                                                                                 >  1:210782/1‑251 (MQ=255)
                                                                 aaaaTTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGt                                                                                                                                                                             <  1:282799/251‑1 (MQ=255)
                                                                       tCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTAc                                                                                                                                                                       <  1:686892/251‑1 (MQ=255)
                                                                          cAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACAt                                                                                                                                                                     <  1:47461/250‑1 (MQ=255)
                                                                                      tttGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGt                                                                                                                                                           <  1:93807/248‑1 (MQ=255)
                                                                                      tttGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGt                                                                                                                                                           <  1:823155/248‑1 (MQ=255)
                                                                                            ttCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAg                                                                                                                                                  >  1:451079/1‑251 (MQ=255)
                                                                                                     ccTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGt                                                                                                                                         <  1:775113/251‑1 (MQ=255)
                                                                                                                 ggTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATc                                                                                                                                                                                     >  1:52183/1‑195 (MQ=255)
                                                                                                                        tCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTgg                                                                                                                      <  1:286820/251‑1 (MQ=255)
                                                                                                                         ccACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTAc                                                                                                                                                                       >  1:263766/1‑201 (MQ=255)
                                                                                                                              gCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCt                                                                                                                 >  1:630076/1‑250 (MQ=255)
                                                                                                                              gCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCt                                                                                                                 >  1:585113/1‑250 (MQ=255)
                                                                                                                                        ttttagtttCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTggg                                                                                                      <  1:357193/251‑1 (MQ=255)
                                                                                                                                            agtttCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGTCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGttt                                                                                                   >  1:92892/1‑250 (MQ=255)
                                                                                                                                              tttCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGa                                                                                                <  1:242027/251‑1 (MQ=255)
                                                                                                                                                     cGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGgcag                                                                                         <  1:139888/251‑1 (MQ=255)
                                                                                                                                                          cTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGc                                                                                    <  1:457802/251‑1 (MQ=255)
                                                                                                                                                                 aatcagttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCAcc                                                                             <  1:58839/251‑1 (MQ=255)
                                                                                                                                                                 aatcagttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCAcc                                                                             <  1:95707/251‑1 (MQ=255)
                                                                                                                                                                 aatcagttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCAcc                                                                             <  1:14111/251‑1 (MQ=255)
                                                                                                                                                                 aatcagttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCAcc                                                                             <  1:699123/251‑1 (MQ=255)
                                                                                                                                                                      gttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGAtg                                                                                                                                                                                                    >  1:286410/1‑127 (MQ=255)
                                                                                                                                                                      gttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTg                                                                                                                                                                                <  1:824485/147‑1 (MQ=255)
                                                                                                                                                                      gttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCtgtg                                                                                                                          <  1:779418/201‑1 (MQ=255)
                                                                                                                                                                      gttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCtgtg                                                                         >  1:620283/1‑250 (MQ=255)
                                                                                                                                                                      gttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCtgtg                                                                         >  1:559064/1‑250 (MQ=255)
                                                                                                                                                                      gttttaatcagtCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCtgtg                                                                         >  1:864278/1‑250 (MQ=255)
                                                                                                                                                                                    aaTTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCAcc                                                                             <  1:691002/232‑1 (MQ=255)
                                                                                                                                                                                        aaCAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTAt                                                      >  1:27276/1‑251 (MQ=255)
                                                                                                                                                                                            gaatgaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTggg                                                                                                      >  1:879335/1‑199 (MQ=255)
                                                                                                                                                                                            gaatgaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCAt                                                  >  1:444555/1‑251 (MQ=255)
                                                                                                                                                                                            gaatgaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCAt                                                  >  1:722698/1‑251 (MQ=255)
                                                                                                                                                                                             aatgaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTc                                                    <  1:133899/248‑1 (MQ=255)
                                                                                                                                                                                              atgaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATAc                                                <  1:120525/251‑1 (MQ=255)
                                                                                                                                                                                                gaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGa                                                                                                                                                                                                                                                   >  1:834406/1‑54 (MQ=255)
                                                                                                                                                                                                gaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCa                                                                                                                                                    >  1:378536/1‑149 (MQ=255)
                                                                                                                                                                                                gaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACtt                                                                   <  1:307643/230‑1 (MQ=255)
                                                                                                                                                                                                gaatACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACcg                                              >  1:369482/1‑251 (MQ=255)
                                                                                                                                                                                                     caacaaATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACg                                                                                                                                                                                                                                  >  1:185476/1‑66 (MQ=255)
                                                                                                                                                                                                     caacaaATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACAt                                                                                                                                                                     <  1:22936/127‑1 (MQ=255)
                                                                                                                                                                                                     caacaaATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGc                                                                                                                                                                <  1:756944/132‑1 (MQ=255)
                                                                                                                                                                                                          aaTTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGcc                                                                                   <  1:342321/204‑1 (MQ=255)
                                                                                                                                                                                                          aaTTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTttatt                                    <  1:244661/251‑1 (MQ=255)
                                                                                                                                                                                                            tttAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTac                                  <  1:213104/251‑1 (MQ=255)
                                                                                                                                                                                                                aTGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACacga                              <  1:857789/251‑1 (MQ=255)
                                                                                                                                                                                                                aTGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACacga                              <  1:317466/251‑1 (MQ=255)
                                                                                                                                                                                                                   gATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAg                                                                                                                                                             >  1:343624/1‑121 (MQ=255)
                                                                                                                                                                                                                     tatGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTacac                                >  1:91605/1‑244 (MQ=255)
                                                                                                                                                                                                                         aaGGCAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATgtcg                      <  1:71356/250‑1 (MQ=255)
                                                                                                                                                                                                                             cAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTacac                                <  1:550800/236‑1 (MQ=255)
                                                                                                                                                                                                                             cAATCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATGTCGTCGAt                 <  1:551257/251‑1 (MQ=255)
                                                                                                                                                                                                                               aTCCAGGCGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCAt                                                                                                          >  1:697134/1‑160 (MQ=255)
                                                                                                                                                                                                                                      cGTTAAGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATGTCGTCGATGAATCGGat        >  1:139763/1‑251 (MQ=255)
                                                                                                                                                                                                                                          aaGCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATGTCGTCGATGAATCGGATATg     >  1:23491/1‑250 (MQ=255)
                                                                                                                                                                                                                                            gCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATGTCGTCGATGAATCGGATATGCGt  >  1:523254/1‑251 (MQ=255)
                                                                                                                                                                                                                                            gCCATGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCACTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATGTCGTCGATGAATCGGATATGCGt  >  1:539874/1‑251 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                      
TAAATAGGGCGTGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCACGGGGATATGCAAAAAGTAAACGAATCAATTTTAGCCCAACTGAACTCCGATGTGGCGTTAATTAATCAGTTGGGTTTCTACATTGTGCAAGGTGGCGGCAAGCGTATTCGTCCGCTTATCGCTGTGTTGGCGGCTCGTGCATTGGGTTTCGATGGGCAGCAAGCCATCACCTGTGCGACTTTTGTCGAGTTTATTCATACCGCGTCTTTATTACACGACGATGTCGTCGATGAATCGGATATGCGT  >  1/314272‑314758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑