Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 314,283 T→C intergenic (‑69/‑197) unknown ← / → unknown LSU ribosomal protein L21p/Octaprenyl diphosphate synthase (EC 2.5.1.90)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*1314,2830TC100.0% 226.8 / NA 83intergenic (‑69/‑197)unknown/unknownLSU ribosomal protein L21p/Octaprenyl diphosphate synthase (EC 2.5.1.90)
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/45);  total (38/45)

CTACTTTCGCGCCGGCAACGACCGGTGCACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGTGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCACGGGGATATGCAA  >  1/314037‑314524
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                 
ctactTTCGCGCCGGCAACGACCGGTGCACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAAt                                                                                                                                                                                                                                               >  1:236172/1‑251 (MQ=255)
ctactTTCGCGCCGGCAACGACCGGTGCACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAAt                                                                                                                                                                                                                                               >  1:179881/1‑251 (MQ=255)
                 aCGACCGGTGCACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAg                                                                                                                                                                                                                              >  1:759734/1‑251 (MQ=255)
                    aCCGGTGCACCGATTTTACCATCTTCACCATTAGCACCCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAGGTTTTTCGAAACGAACCACTTGACCTTCGCTTACTCGGTGTTTTTTACCGCCACTTTTGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAgggg                                                                                                                                                                                                                           <  1:612031/251‑1 (MQ=255)
                    aCCGGTGCACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAgggg                                                                                                                                                                                                                           <  1:694569/251‑1 (MQ=255)
                    aCCGGTGCACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAgggg                                                                                                                                                                                                                           <  1:589658/251‑1 (MQ=255)
                           cACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTGGCGCCGGCTGCAAGTTAAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCaa                                                                                                                                                                                                                    <  1:298948/251‑1 (MQ=255)
                                aTTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAatt                                                                                                                                                                                                               >  1:123531/1‑251 (MQ=255)
                                          cTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACgag                                                                                                                                                                                                     >  1:391521/1‑251 (MQ=255)
                                               ccATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAAt                                                                                                                                                                                                >  1:659215/1‑251 (MQ=255)
                                                      cAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAAt                                                                                                                                                                                         <  1:226751/251‑1 (MQ=255)
                                                          cATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAgggg                                                                                                                                                                                                                           >  1:117608/1‑213 (MQ=255)
                                                           aTCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCg                                                                                                                                                                                     >  1:661698/1‑250 (MQ=255)
                                                                               aaCTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTc                                                                                                                                                                <  1:893147/251‑1 (MQ=255)
                                                                                 cTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAg                                                                                                                                                              >  1:749750/1‑251 (MQ=255)
                                                                                                                                           tCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAAcc                                                                                                    <  1:469785/251‑1 (MQ=255)
                                                                                                                                              gtgtTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGa                                                                                                 >  1:225015/1‑251 (MQ=255)
                                                                                                                                                               tttGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagttttaatc                                                                                <  1:827049/251‑1 (MQ=255)
                                                                                                                                                                ttGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAAGTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagttttaatc                                                                                <  1:371221/250‑1 (MQ=255)
                                                                                                                                                                              aCATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAACATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAga                                                                 >  1:424340/1‑251 (MQ=255)
                                                                                                                                                                               cATAAATACTCCGCTGTAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATGCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatc                                                                                          <  1:444623/225‑1 (MQ=255)
                                                                                                                                                                               cATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGa                                                                                                                                                                    >  1:312329/1‑151 (MQ=255)
                                                                                                                                                                               cATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGa                                                                                                                                                             >  1:682460/1‑158 (MQ=255)
                                                                                                                                                                               cATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACtttag                                                                                                                        >  1:798381/1‑195 (MQ=255)
                                                                                                                                                                               cATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAgaa                                                                >  1:359499/1‑251 (MQ=255)
                                                                                                                                                                               cATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAgaa                                                                >  1:631608/1‑251 (MQ=255)
                                                                                                                                                                               cATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAg                                                                  >  1:718803/1‑249 (MQ=255)
                                                                                                                                                                                 tAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagttttaatc                                                                                >  1:123509/1‑233 (MQ=255)
                                                                                                                                                                                 tAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAgaatg                                                              >  1:130698/1‑251 (MQ=255)
                                                                                                                                                                                      aCTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATac                                                         <  1:543325/251‑1 (MQ=255)
                                                                                                                                                                                         ccGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTACTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAgaatgaa                                                            >  1:365599/1‑245 (MQ=255)
                                                                                                                                                                                           gCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATa                                                          >  1:183464/1‑245 (MQ=255)
                                                                                                                                                                                           gCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATAcaacaa                                                    >  1:88281/1‑251 (MQ=255)
                                                                                                                                                                                            cTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGaaaa                                                                                                                                                  <  1:657119/156‑1 (MQ=255)
                                                                                                                                                                                            cTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGc                                                                                                                               >  1:812854/1‑175 (MQ=255)
                                                                                                                                                                                            cTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCGCtttagtttttag                                                                                                                 <  1:652526/189‑1 (MQ=255)
                                                                                                                                                                                            cTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatc                                                                                          <  1:880017/212‑1 (MQ=255)
                                                                                                                                                                                            cTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAg                                                                  <  1:624282/236‑1 (MQ=255)
                                                                                                                                                                                            cTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACaaa                                                   >  1:593748/1‑251 (MQ=255)
                                                                                                                                                                                            cTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGAAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatc                                                                                          >  1:432371/1‑212 (MQ=255)
                                                                                                                                                                                              ataATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAGAAGTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGCTAAAATCCACCCCCTTTTAGTTTTTAGTTCCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAAtt                                                 <  1:69274/251‑1 (MQ=255)
                                                                                                                                                                                              ataATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAAtt                                                 <  1:465726/251‑1 (MQ=255)
                                                                                                                                                                                              ataATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAAtt                                                 <  1:127856/251‑1 (MQ=255)
                                                                                                                                                                                              ataATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAAtt                                                 <  1:771901/251‑1 (MQ=255)
                                                                                                                                                                                               taATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAAttt                                                >  1:249826/1‑251 (MQ=255)
                                                                                                                                                                                                 aTTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatc                                                                                          <  1:703768/207‑1 (MQ=255)
                                                                                                                                                                                                    gtgCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATgg                                           >  1:695831/1‑251 (MQ=255)
                                                                                                                                                                                                     tgCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATgg                                           <  1:886519/250‑1 (MQ=255)
                                                                                                                                                                                                      gCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAat                                                                                                                                                                                                                <  1:818524/84‑1 (MQ=255)
                                                                                                                                                                                                      gCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTaa                                                                                                                                         <  1:240383/155‑1 (MQ=255)
                                                                                                                                                                                                      gCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagttttaatc                                                                                >  1:650385/1‑212 (MQ=255)
                                                                                                                                                                                                      gCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGat                                         >  1:50525/1‑251 (MQ=255)
                                                                                                                                                                                                       ctctAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAg                                                                  <  1:413795/225‑1 (MQ=255)
                                                                                                                                                                                                       ctctAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGata                                        >  1:542966/1‑251 (MQ=255)
                                                                                                                                                                                                         ctAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATcc                                                                                                                                    <  1:755592/157‑1 (MQ=255)
                                                                                                                                                                                                         ctAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagttttaatc                                                                                <  1:333603/209‑1 (MQ=255)
                                                                                                                                                                                                         ctAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATac                                                         <  1:211824/232‑1 (MQ=255)
                                                                                                                                                                                                           aaTGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGaa                                    <  1:119060/251‑1 (MQ=255)
                                                                                                                                                                                                            aTGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACtttagttt                                                                                                                     <  1:451024/169‑1 (MQ=255)
                                                                                                                                                                                                            aTGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAg                                   >  1:686855/1‑251 (MQ=255)
                                                                                                                                                                                                             tgttgtTTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAgg                                  >  1:344118/1‑251 (MQ=255)
                                                                                                                                                                                                              gttgttTCATTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACaaa                                                   >  1:53886/1‑233 (MQ=255)
                                                                                                                                                                                                                      aTTTCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAgg                         <  1:56516/251‑1 (MQ=255)
                                                                                                                                                                                                                         tCGCACATAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGt                      <  1:295840/251‑1 (MQ=255)
                                                                                                                                                                                                                              caTAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATc                                                                                                                                     <  1:406312/135‑1 (MQ=255)
                                                                                                                                                                                                                              caTAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatc                                                                                          <  1:524681/178‑1 (MQ=255)
                                                                                                                                                                                                                              caTAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATc                             >  1:102571/1‑239 (MQ=255)
                                                                                                                                                                                                                              caTAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGc                 <  1:744129/251‑1 (MQ=255)
                                                                                                                                                                                                                              caTAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTAATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAg                  >  1:441645/1‑250 (MQ=255)
                                                                                                                                                                                                                               aTAAAATTCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGcc                <  1:881347/251‑1 (MQ=255)
                                                                                                                                                                                                                                     ttCATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagttttaatc                                                                                <  1:320033/181‑1 (MQ=255)
                                                                                                                                                                                                                                       cATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGCATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATcc                                                                                                                                    >  1:779467/1‑127 (MQ=255)
                                                                                                                                                                                                                                       cATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGaaaa                                                                                                                                                  >  1:67336/1‑113 (MQ=255)
                                                                                                                                                                                                                                       cATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACtttag                                                                                                                        <  1:92004/139‑1 (MQ=255)
                                                                                                                                                                                                                                       cATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagttttaatc                                                                                <  1:74493/179‑1 (MQ=255)
                                                                                                                                                                                                                                       cATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAtttaatcagtttt                                                                                    >  1:748925/1‑175 (MQ=255)
                                                                                                                                                                                                                                       cATATAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAg                                                                  <  1:104050/193‑1 (MQ=255)
                                                                                                                                                                                                                                        atatAAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCa               <  1:422115/243‑1 (MQ=255)
                                                                                                                                                                                                                                         tataAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATc                                                                                                                                     <  1:237616/124‑1 (MQ=255)
                                                                                                                                                                                                                                         tataAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGAttt                                                                                              <  1:477306/163‑1 (MQ=255)
                                                                                                                                                                                                                                           taAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACgag                                                                                                                                                                                                     <  1:516759/58‑1 (MQ=255)
                                                                                                                                                                                                                                           taAATAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGc    <  1:126194/251‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTAGGGCGCGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCATGGGGATATGCaa  <  1:357426/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                 
CTACTTTCGCGCCGGCAACGACCGGTGCACCGATTTTAACATCTTCACCATTAGCAACCATCAACACCGAATCAAACTCAACTGTTGCGCCGGCTGCAAGTTCAAGTTTTTCCAAACGAACCACTTGACCTTCGCTTACTCGGTGTTGTTTACCGCCACTTTGGAAAACTGCGTACATAAATACTCCGCTATAATTGTGCTCTAATGTTGTTTCATTTCGCACATAAAATTCATATAAATAGGGCGTGAATTCTACGGAAAAATTTAGGGGATAGCAAGAATTTATTTACGAGAAAATAAAAAATTTCGCAATTTCGGCAGTTTGATTTCAGAAAGCCTGAAAAATCAGGTAAAATCCACCGCACTTTAGTTTTTAGTTTCCTCCGAACCTGATTTAATCAGTTTTAATCAGTCGAATTAACAGAATGAATACAACAAATTTAATGGATATGAAGGCAATCCAGGCGTTAAGCCACGGGGATATGCAA  >  1/314037‑314524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑