| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,670,985 | C→T | R142R (CGC→CGT) | unknown → | Diaminopimelate epimerase (EC 5.1.1.7) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,670,985 | 0 | C | T | 100.0% | 224.3 / NA | 81 | R142R (CGC→CGT) | unknown | Diaminopimelate epimerase (EC 5.1.1.7) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (29/52); total (29/52) | |||||||||||
ATCGCATTTTTAACGCGGACGGCAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGCACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAACGCGGTACCGGCGAAACCCAGGCTTGCGGTAGCGGCGCT > 1/1670738‑1671222 | aTCGCATTTTTAACGCGGACGGCAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACg > 1:174039/1‑251 (MQ=255) aaCGCGGACGGCAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGAAAGCACGAAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGTTTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAAc < 1:883341/251‑1 (MQ=255) cgcgGACGGCAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTGGTGACGCTCAAGGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGAAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACgg < 1:20421/251‑1 (MQ=255) cgcgGACGGCAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACgg < 1:773289/251‑1 (MQ=255) gACGGCAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCG‑‑‑GAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCtgtg > 1:99560/1‑251 (MQ=255) cggCGAAGTGGCGCAATGGGGCAACGGCGCACGTTGTTTCGCCCGTTTCGGGACGCTCAAAGGCTTAACC‑AAAAAAAAAGACATCGCCGTAAGCACGAAAAAGGGCAAAATGCTGCTGCCCGTG‑AAAAAAGATGGTAACGTGTGGGTAAACAGGGGCGAACCGATTTGGGCGCAGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGc < 1:71895/248‑1 (MQ=255) cAGCGAAGTGGCGCAATGTGGCACCGGCGCACGCTGTTTGGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AAAAAAAAAGACATCGCCGTAAGCACGAAAACCGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGc < 1:20035/250‑1 (MQ=255) cAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGc < 1:808876/250‑1 (MQ=255) cAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGc < 1:279636/250‑1 (MQ=255) cAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACAGGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGc < 1:279399/250‑1 (MQ=255) cAGCGAAGGGGCGCAATGGGGCACCGGCGCGCGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGAAAAATGCTGCGGACCGGG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGGGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGc < 1:515628/250‑1 (MQ=255) cGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTC‑AAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAgcgc < 1:613505/251‑1 (MQ=255) aaGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAgcgc < 1:230829/250‑1 (MQ=255) gTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGt > 1:756091/1‑251 (MQ=255) aaTGTGGCAACGGCGCCCGCTGTTTGGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACAGCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGGG‑AAAGAAGATGTTAACGTGCGGGTGAACGTGGGCGAACCGATTGGGGAGCGGAATAAAATC‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATg < 1:131805/251‑1 (MQ=255) aaTGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGAAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATg < 1:361704/251‑1 (MQ=255) aTGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAg > 1:752452/1‑237 (MQ=255) tgtgGCAACGGCGCCCGCTGTTTCGCCCGTTTCGTGACCCTAAAAGCCTTAACC‑AATAAAAAAGACGTCGCCGAAAGCCCGCAAAACGGCAAAATGCTGCTGACCGTA‑AAAGAAAATGGTAACGGGCGGGTGAACATGGGCAAACCGATTGGGGAGCCAAAAAAAATC‑CCT‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg < 1:336546/251‑1 (MQ=255) tgtgGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAGGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGAGAACCGTTTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg < 1:146801/251‑1 (MQ=255) tgtgGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg < 1:565804/251‑1 (MQ=255) tgtgGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACACCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTACCGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg < 1:727593/251‑1 (MQ=255) tgGCAACGGCGCCCGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGc < 1:696359/250‑1 (MQ=255) cACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AAAAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCAAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTg < 1:643289/250‑1 (MQ=255) cTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGc > 1:716572/1‑217 (MQ=255) gTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCgtggtg > 1:7135/1‑251 (MQ=255) gTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCgtggtg > 1:843847/1‑251 (MQ=255) cccGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGGG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTg < 1:440477/251‑1 (MQ=255) ccGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGACCCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTgg < 1:624954/251‑1 (MQ=255) tttCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTggagg > 1:429680/1‑251 (MQ=255) tttCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTggagg < 1:554669/251‑1 (MQ=255) ttacGTGACGCAAAAAGGC‑TAACCAAAAAAAAAAGACATCGCCGTAACCAAGCAAACCGTCAAAATGCGGCTAGCGGTA‑AAAGAAGATGGAAACGTGCGGGTGAACAGGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTggagg < 1:703598/248‑1 (MQ=255) ttCGTGACGCTCAAAGGCTAAACC‑AATAAAAAAGACATCGCCGTAAGCACGAAAAACGGCAAAATGCTGCTGACGGTG‑AAAGAAGATGGTAACGTGGGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTggagga < 1:820226/251‑1 (MQ=255) gCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCaaa > 1:562815/1‑251 (MQ=255) aaGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATg < 1:588760/206‑1 (MQ=255) ggCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTg > 1:846444/1‑231 (MQ=255) gCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAAt > 1:372439/1‑251 (MQ=255) aaCC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg < 1:870751/201‑1 (MQ=255) aacaaaTAAAAAAGACATCGCCGAAAGCACGCAAAACGGCAAAAGGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCAACCCGATTTGGGGGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAAc < 1:57046/170‑1 (MQ=255) aaataaaaaaacaaccgcggaaaGCACGAAAAACGGAAAAATGCTGC‑GGCCGGGAAAAGAAGATGTTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCGAAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGaac < 1:849345/230‑1 (MQ=255) aaaaaaaaaaGACAGCGCCGAAAGCACGAAAAACGGCAAAATGCTGCTGACGTTG‑AAAGAAGAGGGTAACGGGGGGGTAAACATGGGCGAACAGTTTTGGGAGCCAAAAAAAATT‑CCT‑TTTC‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGaac < 1:781099/247‑1 (MQ=255) aTAAAAAAGACATTCCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGACCCGATTTGGGAGCCGAATAAAATT‑CCT‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTggagga < 1:245067/226‑1 (MQ=255) ccATCGCCGTAAGCACGCAAACGGGCAAAATGCTGCTGACCGTA‑AAAAAAGAGGGTAACGTGGGGGTAAACATGGGAGACCCGTTTTGGGAGCCGAA‑AAAATTCCCT‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTcc < 1:158792/249‑1 (MQ=255) cGCCGTAAGCACGCAAAAGGGAAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCGGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAAc < 1:26460/222‑1 (MQ=255) cGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAAc < 1:562621/156‑1 (MQ=255) cGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTAt > 1:549832/1‑251 (MQ=255) gCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg > 1:898169/1‑182 (MQ=255) gCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTAtt > 1:756257/1‑251 (MQ=255) aaagcccgaaaaaCGGAAAAATGCTGCTGCCGGTG‑AAAGAAGATGGTAACGGGGGGGTAAACAGGGGCGAACCGTTTGGGGAGCCGAA‑AAAATTCCCT‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGaa < 1:173223/242‑1 (MQ=255) gCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGaac > 1:465211/1‑228 (MQ=255) acgaaaaaCGGAAAAATGTTGCTGACGGTA‑AAAGAAGATGGTACCGTGGGGGTAAACGGGGGAGAACCTTTTGGGGAGCGGAATAAATTC‑CCT‑TTTC‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCa < 1:103440/247‑1 (MQ=255) aTGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGc > 1:559663/1‑159 (MQ=255) aTGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGa > 1:722499/1‑251 (MQ=255) gctgctGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg > 1:158722/1‑156 (MQ=255) ctgctgACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATg > 1:738395/1‑153 (MQ=255) ccGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTGTCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAAt > 1:153352/1‑251 (MQ=255) aTGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTg > 1:630065/1‑161 (MQ=255) ggtacggtgggggTAAACAGGGGCGAACCGATTTGGGAGCGAAAAAAAATT‑CCT‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGc < 1:473861/240‑1 (MQ=255) ggtaaggtggggggaaaCAGGGGGGAACCGTTTGGGGAGCCGAATAAATTC‑CCT‑TTTC‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGc < 1:57886/235‑1 (MQ=255) gTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAggtggg > 1:671619/1‑250 (MQ=255) ggggTGAACAGGGGCGAACCGTTTGGGGAGCCAAAAAAAATT‑CCT‑TTTC‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGc < 1:627548/240‑1 (MQ=255) ggtaaacaggggcaaacggtttggggAGCCAAAAAAAATC‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAAt < 1:310377/227‑1 (MQ=255) aaaacaggggaaacccgtttggggAGCAGAA‑AAAATT‑TCGTTTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGt < 1:551934/230‑1 (MQ=255) gAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGt > 1:146192/1‑250 (MQ=255) tGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAAtg > 1:485309/1‑162 (MQ=255) aaaCCGTTTTGGGAGCCGAATAAATTC‑CCT‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCaa < 1:289566/250‑1 (MQ=255) tttatagaaaacagaaaTAAATTT‑CCT‑TTTC‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCTTTGCGTGGTGCAGGTGGAGAATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACt < 1:432494/236‑1 (MQ=255) cccgtttggggggccaaaaaaaAT‑CCG‑TTTTCCCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAAc < 1:327599/233‑1 (MQ=255) gATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTa > 1:871782/1‑250 (MQ=255) tggggAGCC‑AAAAAAATTCCCG‑TTTC‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTAcgcg < 1:434000/249‑1 (MQ=255) aaaaTT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAAt > 1:624558/1‑216 (MQ=255) aTT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCTAAACGGTGCTGTGCAGCGCGGTATCTATggg < 1:799968/86‑1 (MQ=255) g‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATggg < 1:748968/81‑1 (MQ=255) tttGAGAAAAATTATATTCTGCGTACGGAAATCCAACCGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAACGCGGTACCGGCGAAACCCAGGCTTGCgg < 1:434816/251‑1 (MQ=255) cagaTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAACGCGGTACCGGCGAAACCCAGGCTTGCGGTAgcgg < 1:194031/247‑1 (MQ=255) aaaTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACt < 1:274631/114‑1 (MQ=255) aaTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAACGCGGTACCGGCGAAACCCAGGCTTGCGGTAgcggcg > 1:116144/1‑250 (MQ=255) aTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTg < 1:84397/80‑1 (MQ=255) aTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTg > 1:377411/1‑155 (MQ=255) aTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAAc < 1:46382/213‑1 (MQ=255) aTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAACGCGGTACCGGCGAAACCCAGGCTTGCGGTAgcggcg > 1:839184/1‑249 (MQ=255) aTTATATTCTGCGTACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAACGCGGTACCGGCGAAACCCAGGCTTGCGGTAGCGGCGCt < 1:730957/251‑1 (MQ=255) | ATCGCATTTTTAACGCGGACGGCAGCGAAGTGGCGCAATGTGGCAACGGCGCACGCTGTTTTGCCCGTTTCGTGACGCTCAAAGGCTTAACC‑AATAAAAAAGACATCGCCGTAAGCACGCAAAACGGCAAAATGCTGCTGACCGTG‑AAAGAAGATGGTAACGTGCGGGTGAACATGGGCGAACCGATTTGGGAGCCGAATAAAATT‑CCG‑TTTA‑CCGCCAATAAATTTGAGAAAAATTATATTCTGCGCACGGAAATCCAAACGGTGCTGTGCAGCGCGGTATCTATGGGCAATCCGCATTGCGTGGTGCAGGTGGAGGATATTCAAACCGCCAATGTGGAACAACTCGGTCCGCTATTGGAAAATCATGAACGTTTTCCGGAACGGGTGAATGCGGGCTTTATGCAGGTGGTGAATCGTCATCACATCAAACTACGCGTATACGAACGCGGTACCGGCGAAACCCAGGCTTGCGGTAGCGGCGCT > 1/1670738‑1671222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |