| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 307,364 | C→T | C134Y (TGT→TAT) | unknown ← | Oligopeptide ABC transporter, permease protein OppB (TC 3.A.1.5.1) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 307,364 | 0 | C | T | 100.0% | 226.2 / NA | 82 | C134Y (TGT→TAT) | unknown | Oligopeptide ABC transporter, permease protein OppB (TC 3.A.1.5.1) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (41/41); total (41/41) | |||||||||||
AAGCCTTTTGCCTTGGCGGTACGAATAAAATTGGAGTGCAACACTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAACAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATTTACGGACTGATCTTTATATTTAAAAGACGGACCAAAATCCCCCTTGACCAAGTTCTTTAAATATAAAAAATACTGTGTATGCAGCGGTTCGTTTAGGTGA > 1/307124‑307606 | aaGCTTTTTGCCTTGGCGGTACGAATAAAATGGGAGTGCAACACTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAg < 1:272652/251‑1 (MQ=255) ttttGCCTTGGCGGTACGAATAAAATTGGAGTGCAACACTTCAATCATAGACCCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGt < 1:791699/251‑1 (MQ=255) ccTTGGCGGTACGAATAAAATTGGAGTGCAACACTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGCTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATcc < 1:522163/251‑1 (MQ=255) tAAAATTGGAGTGCAACACTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTgg > 1:889251/1‑251 (MQ=255) aaaTTGGAGTGCAACACTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGtt > 1:410403/1‑251 (MQ=255) aaaTTGGAGTGCAACACTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGtt > 1:731303/1‑251 (MQ=255) acacTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAg > 1:569948/1‑250 (MQ=255) tCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATcc < 1:322413/212‑1 (MQ=255) tCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTc > 1:371726/1‑230 (MQ=255) tCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCcggcg > 1:185696/1‑251 (MQ=255) tCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCcggcg > 1:784186/1‑251 (MQ=255) cATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCAt > 1:567234/1‑214 (MQ=255) cgcATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCt < 1:47639/185‑1 (MQ=255) cgcATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAg > 1:781127/1‑251 (MQ=255) gcATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGTCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAAt > 1:845117/1‑198 (MQ=255) aTAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGt < 1:319333/251‑1 (MQ=255) aaTCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTa > 1:246968/1‑251 (MQ=255) aTCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTAc < 1:817526/251‑1 (MQ=255) ccGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAg < 1:632542/251‑1 (MQ=255) cgcgCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGc < 1:641786/251‑1 (MQ=255) cgcgCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGc < 1:657498/251‑1 (MQ=255) gcgcAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTc > 1:789613/1‑209 (MQ=255) aaTGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGa < 1:611131/251‑1 (MQ=255) gCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGaaaa > 1:118327/1‑251 (MQ=255) ccACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGc < 1:345072/250‑1 (MQ=255) ccACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGc < 1:36641/250‑1 (MQ=255) ccACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCa > 1:140789/1‑251 (MQ=255) gTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGttt > 1:264735/1‑251 (MQ=255) gCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGaaa > 1:467356/1‑250 (MQ=255) aaTGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAg < 1:233285/251‑1 (MQ=255) gTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAacac > 1:95444/1‑185 (MQ=255) cTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAAt < 1:737011/128‑1 (MQ=255) cTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGaaa > 1:666479/1‑201 (MQ=255) cAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGat < 1:200065/251‑1 (MQ=255) ccccTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATtta < 1:391501‑M1/251‑4 (MQ=255) cccTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttac < 1:251980‑M1/251‑5 (MQ=255) cATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttactta > 1:415671‑M1/1‑243 (MQ=255) ttCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttac > 1:643155‑M1/1‑241 (MQ=255) ccAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggac < 1:779804‑M1/251‑13 (MQ=255) ccGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACAccc > 1:359815/1‑162 (MQ=255) ccGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttata < 1:130171‑M1/251‑24 (MQ=255) ccGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttat < 1:697505‑M1/250‑23 (MQ=255) ccGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttat < 1:671337‑M1/250‑23 (MQ=255) cGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatat < 1:27473‑M1/251‑25 (MQ=255) cGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatat < 1:230994‑M1/251‑25 (MQ=255) gccCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCaa < 1:420368/198‑1 (MQ=255) gccCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaaga > 1:199099‑M1/1‑218 (MQ=255) gccCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaag > 1:609162‑M1/1‑218 (MQ=255) gagTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAg > 1:565956/1‑82 (MQ=255) gagTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGt > 1:713010/1‑87 (MQ=255) gagTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCGGATTATttacttacggactgatctttatatttaaaagacggac > 1:802521‑M1/1‑213 (MQ=255) gagTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttata > 1:531830‑M1/1‑213 (MQ=255) aTCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGTCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaat < 1:81445‑M1/251‑44 (MQ=255) tCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaat > 1:338235‑M1/1‑207 (MQ=255) caacaGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGc > 1:63515/1‑150 (MQ=255) caacaGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttg > 1:75448‑M1/1‑200 (MQ=255) caacaGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttg > 1:889863‑M1/1‑200 (MQ=255) cACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgacc < 1:400801‑M1/248‑55 (MQ=255) cACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgac < 1:107028‑M1/247‑54 (MQ=255) cAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAg > 1:46298/1‑128 (MQ=255) cAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttat > 1:216144‑M1/1‑191 (MQ=255) cAGTAAAGGTGCAAAAACAAAACTCGGCACGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagac < 1:817024‑M1/224‑34 (MQ=255) gTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggac < 1:457388‑M1/201‑13 (MQ=255) aGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaa > 1:506352‑M1/1‑185 (MQ=255) acaaaacTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACGCCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttgcggactgatctttatatttaaaaaacggaccaaaatcccccttgaccaagttctttaaatataaaaaat < 1:180969‑M1/251‑77 (MQ=255) aaaacTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatac < 1:803054‑M1/251‑79 (MQ=255) aacTCGGCATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatactg < 1:164348‑M1/251‑81 (MQ=255) cATGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatactgtgtatgc < 1:410183‑M1/251‑88 (MQ=255) tGATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatactgtgtatgcag < 1:677117‑M1/251‑90 (MQ=255) gATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatactgtgtatgcag > 1:799552‑M1/1‑161 (MQ=255) gATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttc > 1:404404‑M1/1‑161 (MQ=255) gATCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttat > 1:862070‑M1/1‑161 (MQ=255) aTCACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatactgtgtatgcagc < 1:642535‑M1/250‑91 (MQ=255) cACGCCCACCATGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttata < 1:868448‑M1/181‑24 (MQ=255) caccaTGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggac < 1:418378‑M1/164‑13 (MQ=255) ccaTGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCagag < 1:221899/120‑1 (MQ=255) ccaTGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatactgtgtatgcagcggttcgtttag > 1:718031‑M1/1‑150 (MQ=255) ccaTGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatcccccttgaccaagttctttaaatataaaaaatactgtgtatgcagc < 1:899480‑M1/240‑91 (MQ=255) ccaTGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagacggaccaaaatccc > 1:864408‑M1/1‑150 (MQ=255) ccaTGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatat < 1:652713‑M1/174‑25 (MQ=255) ccaTGGAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGG‑TACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttacttacggactgatctttatatttaaaagac > 1:283237‑M1/1‑149 (MQ=255) ggAATAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATttac > 1:226431‑M1/1‑146 (MQ=255) | AAGCCTTTTGCCTTGGCGGTACGAATAAAATTGGAGTGCAACACTTCAATCATAGAACCGCGCATAATCCGCGCAATGCCCGCCACATATCCGATGGTTAAGGATGCCACCGGCAACAGAATGTAACTCAAAGCCCCCTCATTCCAACCGCCTGCCGGCAGCCAGCCCAGAGTTATCGCAAACAACAGCACCAGTAAAGGTGCAAAAACAAAACTCGGCATGATCACGCCCACCATGGAACAGCTCATCAGAATGTAATCCCATCTGCTGTTTTGGTTCAGGGCGGCGAGCGTGCCGGCGGCAACACCCAGGGTTACAGCAAAGAAAAAGGCAATGGTGCCGAGTTTCAGAGAAACGGGCAAGGCGGAAGCAATCAGATTATTTACGGACTGATCTTTATATTTAAAAGACGGACCAAAATCCCCCTTGACCAAGTTCTTTAAATATAAAAAATACTGTGTATGCAGCGGTTCGTTTAGGTGA > 1/307124‑307606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |