| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,584,024 | A→G | P478P (CCA→CCG) | unknown → | Alanyl‑tRNA synthetase (EC 6.1.1.7) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,584,024 | 0 | A | G | 98.8% | 218.5 / ‑4.9 | 82 | P478P (CCA→CCG) | unknown | Alanyl‑tRNA synthetase (EC 6.1.1.7) |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (45/36); total (46/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
TTATATGATACTTATGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCGCAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCAGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGACGAGGTTCACCGTCAACGTATTTCATT > 1/1583779‑1584272 | ttATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGGGACCGCACTTTTCCATGACGGCAAACCGGTAGa > 1:693512/1‑251 (MQ=255) atatGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGGATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATa > 1:139083/1‑251 (MQ=255) atGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATAcc < 1:338562/251‑1 (MQ=255) ggTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATAcc < 1:614055/240‑1 (MQ=255) ggATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACCGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCCAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGGCAAAGTGCgg > 1:217736/1‑251 (MQ=255) aTTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCggt < 1:870859/250‑1 (MQ=255) gCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGAtttt > 1:646950/1‑251 (MQ=255) gCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGGAGATACCATCAGTTCCGGTCAAAGTGCGGGGGTGAtttt > 1:791918/1‑251 (MQ=255) tGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCgg < 1:568717/236‑1 (MQ=255) cGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCTAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGcc < 1:455429/251‑1 (MQ=255) cgGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATAc > 1:256524/1‑198 (MQ=255) cgGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGGAGATACCATCAGTTCCGGTCAAAATGCGGTGGTGATTTTAGATAATACGCCCTTCTATg > 1:701500/1‑251 (MQ=255) gCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCCCTTTTCCATGACGGCAAACCGGTAGATAc > 1:512645/1‑196 (MQ=255) gCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGAt > 1:138155/1‑194 (MQ=255) gCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCg > 1:605210/1‑251 (MQ=255) tACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAAt < 1:281102/251‑1 (MQ=255) tACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAAt < 1:88646/251‑1 (MQ=255) ggATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCgg < 1:774682/199‑1 (MQ=255) tttGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGgaga < 1:428433/251‑1 (MQ=255) cgAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCggg < 1:247504/250‑1 (MQ=255) aaaTCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGc < 1:692535/210‑1 (MQ=255) aaCGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAAc < 1:531508/251‑1 (MQ=255) cgcacAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAAt < 1:153863/246‑1 (MQ=255) cAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGa > 1:846045/1‑251 (MQ=255) ccGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGTCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAAtt > 1:781103/1‑243 (MQ=255) gTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCaaaaa > 1:631887/1‑251 (MQ=255) tATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCaaaaa < 1:804695/250‑1 (MQ=255) ggATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAat > 1:612528/1‑248 (MQ=255) ggATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATg > 1:831813/1‑251 (MQ=255) ggATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATg > 1:267182/1‑251 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTc < 1:708184/162‑1 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTc > 1:23789/1‑162 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGCATCCGGTGGTCAAATCAGAGACATCGGGCGCTTAGAAGGCAACGG‑t > 1:423045/1‑216 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAAtt > 1:189064/1‑223 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATgg > 1:849861/1‑251 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATgg > 1:514656/1‑251 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATgg > 1:831639/1‑251 (MQ=255) gATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATgg > 1:240866/1‑251 (MQ=255) ataACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATcc > 1:297842/1‑170 (MQ=255) ataACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAg > 1:113059/1‑251 (MQ=255) taACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACTGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGACAAATTGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGC‑AAAAGACACCCAAAAATATGGTCAgg > 1:170916/1‑251 (MQ=255) aaTGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTAtt < 1:323905/251‑1 (MQ=255) aTGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGAttt > 1:197592/1‑135 (MQ=255) aTGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTAtt > 1:632788/1‑250 (MQ=255) aTGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTAt > 1:467380/1‑249 (MQ=255) gTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAg > 1:559027/1‑193 (MQ=255) ttATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAat > 1:42362/1‑234 (MQ=255) ttATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGCCAAACCGGAAACATCGGCCGCTT‑GGAGGCAAAGGTTTTTATTTTTGA‑GTAAAAAGACACCCAAAAATAT‑GTCAgggaattgggt > 1:382183/1‑242 (MQ=255) cGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCatat < 1:150439/251‑1 (MQ=255) ttGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCgg < 1:33387/250‑1 (MQ=255) ggCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAAc < 1:172099/250‑1 (MQ=255) aaCCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCGACGG‑TTTTAAt < 1:40122/190‑1 (MQ=255) aaCCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTAccc < 1:895834/251‑1 (MQ=255) gTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTc < 1:658917/90‑1 (MQ=255) ttttGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGt < 1:375148/250‑1 (MQ=255) tttGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAAc < 1:364550/238‑1 (MQ=255) aGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATgg < 1:237106/207‑1 (MQ=255) aGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAAc > 1:103069/1‑233 (MQ=255) ggCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTAt > 1:375287/1‑250 (MQ=255) gCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAAtt < 1:142694/177‑1 (MQ=255) gCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCgg > 1:712525/1‑226 (MQ=255) gCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTGTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATc < 1:313850/250‑1 (MQ=255) cTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCg < 1:746899/251‑1 (MQ=255) ataCTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAAt > 1:72194/1‑173 (MQ=255) ataCTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGt > 1:734123/1‑203 (MQ=255) ataCTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTa < 1:499665/209‑1 (MQ=255) ataCTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGt > 1:781247/1‑250 (MQ=255) aCGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGaa < 1:293083/251‑1 (MQ=255) aCGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGaa < 1:271175/251‑1 (MQ=255) cTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGc < 1:453993/251‑1 (MQ=255) ggCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAg > 1:673627/1‑251 (MQ=255) aaaaGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTgg < 1:875137/251‑1 (MQ=255) aaaGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGc > 1:163778/1‑95 (MQ=255) cACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGACGa > 1:900175/1‑247 (MQ=255) cACTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGACGAGGtt > 1:847424/1‑251 (MQ=255) cTTTTCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGACGAGGTTcg > 1:722151/1‑250 (MQ=255) tttCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGAc > 1:568069/1‑241 (MQ=255) ttCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGACGAGGTTCGCCg < 1:531807/251‑1 (MQ=255) ttCCATGACGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGACAGGTATTCGGTCATATCGGTGAACTTACCCAAGGt < 1:73164/201‑1 (MQ=255) aCGGCAAACCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCg > 1:43115/1‑216 (MQ=255) gaaCCGGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGt < 1:522768/164‑1 (MQ=255) ccAGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGACGAGGTTCGCCGTCAACGTATTTCAtt > 1:861681/1‑251 (MQ=255) | TTATATGATACTTATGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCGCAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCAGTAGATACCATCAGTTCCGGTCAAAGTGCGGTGGTGATTTTAGATAATACGCCATTCTATGCGGAATCCGGTGGTCAAATCGGAGACATCGGGCGCTTAGAAGGCAACGG‑TTTTAATTTTGACGT‑AAAAGACACCCAAAAATATGGTCAGGTATTCGGTCATATCGGTGAACTTACCCAAGGTAGTTTATCCGTCGGGCAGTCCGTGAATGCAGTGGTTGACGAGGTTCACCGTCAACGTATTTCATT > 1/1583779‑1584272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |