| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,583,793 | T→C | Y401Y (TAT→TAC) | unknown → | Alanyl‑tRNA synthetase (EC 6.1.1.7) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,583,793 | 0 | T | C | 100.0% | 183.2 / NA | 67 | Y401Y (TAT→TAC) | unknown | Alanyl‑tRNA synthetase (EC 6.1.1.7) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (36/31); total (36/31) | |||||||||||
GGCATTTATTGGGTGCCGCCGAAGCGTTTTTCTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTATGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCGCAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCAGTAGATACC > 1/1583549‑1584033 | ggCATTTATTGGGTGCCGCCGAAGCGTTTTTCTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGttt > 1:490185/1‑250 (MQ=255) cATTTATTGGGTGCCGCCGAAGCGTTTTTCTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTcc > 1:901305/1‑250 (MQ=255) cATTTATTGGGTGCCGCCGAAGCGTTTTTCTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTcc > 1:620247/1‑250 (MQ=255) ttCTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACCCCAAGCCACCGCGGGGAAATTGCTGCGGTTGGGAGAAGAACAAATTGCGCGTACGCCGGAACGGGGGTTAAACTTATTAGATGAGGCTTTAGCCCCGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGCTTAAGCTATATTATACTTACGGTTTCCCGCTGGGTTTAACTTCCGATGTTTGTCg > 1:215357/1‑251 (MQ=255) cTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAAc < 1:651864/234‑1 (MQ=255) cTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTg > 1:126075/1‑251 (MQ=255) cTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGGGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTg > 1:816463/1‑251 (MQ=255) ccTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATg > 1:109531/1‑225 (MQ=255) tAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGAt > 1:808417/1‑251 (MQ=255) aaTTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATg < 1:296949/251‑1 (MQ=255) gTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCggg > 1:618359/1‑251 (MQ=255) gcgcAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGa > 1:304320/1‑251 (MQ=255) cgcAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGaa < 1:782829/251‑1 (MQ=255) cgcAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGaa < 1:313475/251‑1 (MQ=255) aaagTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGaaaa < 1:406733/250‑1 (MQ=255) aaaaaaCACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACg < 1:480174/251‑1 (MQ=255) aaaaaCACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGt > 1:615547/1‑251 (MQ=255) aaaaCACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGtt < 1:152754/251‑1 (MQ=255) cacCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTgcg > 1:366899/1‑251 (MQ=255) cccAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTGTTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTgcgc < 1:126392/250‑1 (MQ=255) ccACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTgcgcgcac < 1:85271/249‑3 (MQ=255) aCTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGt > 1:203041/1‑250 (MQ=255) cTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAAc > 1:619743/1‑183 (MQ=255) cTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTgagcgcacccgt > 1:354766/1‑244 (MQ=255) tGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGAt < 1:715511/251‑1 (MQ=255) gaagaagaaCAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATta > 1:848422/1‑251 (MQ=255) gaagaaCAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCgg < 1:553414/239‑1 (MQ=255) aagaaCAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAAc < 1:207260/251‑1 (MQ=255) aagaaCAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAAc < 1:260079/251‑1 (MQ=255) aagaaCAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAAc < 1:366849/251‑1 (MQ=255) aCAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATg < 1:389322/251‑1 (MQ=255) aCAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATg < 1:669031/251‑1 (MQ=255) cAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGc < 1:243274/121‑1 (MQ=255) cAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGGGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGt > 1:430273/1‑251 (MQ=255) cgcgTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCg < 1:544717/250‑1 (MQ=255) cTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCgtg > 1:212883/1‑244 (MQ=255) ggAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAAc < 1:893008/229‑1 (MQ=255) ttattaGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGAt < 1:648779/207‑1 (MQ=255) tattaGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTc < 1:221076/222‑1 (MQ=255) tattaGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGGTATTCGTGTTGATGGCATAACCCGTTTTGAAggg > 1:154157/1‑250 (MQ=255) tattaGATGAGGCTTTAGCCGAGATGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTAAATGATGCTTACGGTTTCCCTCTGGATTAAACTGCCGATGTTTGTCGTGAACGCGGCATTACAATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGATTGGGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGc < 1:229201/251‑1 (MQ=255) aGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCtata > 1:239798/1‑251 (MQ=255) gATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTc < 1:397720/192‑1 (MQ=255) aTGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATAc < 1:461842/250‑1 (MQ=255) ggCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAAATAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAAc > 1:388926/1‑202 (MQ=255) aGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAAc > 1:340140/1‑196 (MQ=255) gTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGGCCGCCAGCCAATTCGGTATGGATTATAAc > 1:893854/1‑189 (MQ=255) aaaGGCAAGGTATTATCCGGCGAAGTGGCGTTAAAGTTATATGATACATTCGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCaa < 1:330276/250‑1 (MQ=255) gCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTg > 1:445227/1‑251 (MQ=255) ggTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAAcc > 1:790886/1‑205 (MQ=255) ggTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTg < 1:281877/224‑1 (MQ=255) ggTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCg > 1:784150/1‑251 (MQ=255) gTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCgccagc > 1:834272/1‑156 (MQ=255) gTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGa < 1:286045/170‑1 (MQ=255) gTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATAc < 1:794876/221‑1 (MQ=255) gTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCg > 1:850843/1‑250 (MQ=255) gTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGCTTGCGCGCACAGTCCGCCAGCCAATTCGGGATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATATTGAATCGGAAACGCTGGCAAAAGTGatcg > 1:265535/1‑247 (MQ=255) gCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAg < 1:346026/196‑1 (MQ=255) gCGTTCAAGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCaa > 1:408164/1‑251 (MQ=255) aGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGaa > 1:589583/1‑89 (MQ=255) aGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCg < 1:490213/163‑1 (MQ=255) aGTTATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGGTTTGAAGGCTATAc > 1:309506/1‑196 (MQ=255) ttATATGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGGGACCGCACTTTTCCATGACGGCAAACCGGTAGa > 1:693512/1‑251 (MQ=255) atatGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAAcc > 1:143347/1‑175 (MQ=255) atatGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGGATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATa > 1:139083/1‑251 (MQ=255) atGATACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCGGTAGATAcc < 1:338562/251‑1 (MQ=255) tACTTACGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCACAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAAccc > 1:711905/1‑170 (MQ=255) | GGCATTTATTGGGTGCCGCCGAAGCGTTTTTCTATAAGCTCGTGCCAACCTTAATTGAAGTGATGGCGCAGGCGGGCGAAGAAGTGAAAAAACACCAAGCCACTGTGGAGAAATTGCTGCGTTTGGAAGAAGAACAATTTGCGCGTACGCTGGAACGTGGTTTAACCTTATTAGATGAGGCTTTAGCCGAGGTGAAAGGCAAGGTATTATCCGGCGAAGTGGCGTTCAAGTTATATGATACTTATGGTTTCCCGCTGGATTTAACTGCCGATGTTTGTCGTGAACGCGGCATTACCATCGATGAGGCGGGATTTGAACGCGAGATGGAAAATCAACGTTTGCGCGCGCAGTCCGCCAGCCAATTCGGTATGGATTATAACAATGTTATTCGTGTTGATGGCATAACCCGTTTTGAAGGCTATACTGAATCGGAAACGCTGGCAAAAGTGACCGCACTTTTCCATGACGGCAAACCAGTAGATACC > 1/1583549‑1584033 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |