| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,567,492 | G→A | S180L (TCG→TTG) | unknown ← | Tetracenomycin polyketide synthesis O‑methyltransferase TcmP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,567,492 | 0 | G | A | 100.0% | 210.7 / NA | 79 | S180L (TCG→TTG) | unknown | Tetracenomycin polyketide synthesis O‑methyltransferase TcmP |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (43/36); total (43/36) | |||||||||||
TTTTTAGGGTGAATTTTAACTTATCCGATAATACAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCGAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTATCAAACGCCGACGCGGCAAGCAAAATTTCATTTTCCGCCGGCGGCATCAGTTGCT > 1/1567251‑1567729 | tttttAGGGTGAATTTTAACTTATCCGATAATACAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGa > 1:387101/1‑250 (MQ=255) gAATTTTAACTTATCCGATAATACAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGt > 1:461168/1‑251 (MQ=255) aTTTTAACTTATCCGATAATACAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGtgc < 1:887963/251‑1 (MQ=255) aTCCGATAATACAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTc < 1:188913/251‑1 (MQ=255) cGATAATACAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCaaa > 1:613684/1‑251 (MQ=255) ataCAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGGGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGa > 1:518485/1‑251 (MQ=255) ataCAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGGGGTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTc > 1:891484/1‑243 (MQ=255) aaaCGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGcc < 1:4892/251‑1 (MQ=255) cGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTTGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCACATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAACTTCTGCCGATGTCAAAGGCGATTTTGccac > 1:434541/1‑250 (MQ=255) cGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGt > 1:23346/1‑221 (MQ=255) aTTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTaaaa < 1:252817/251‑1 (MQ=255) tttGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCTGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAac < 1:863929/251‑1 (MQ=255) cGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAacgg > 1:396213/1‑245 (MQ=255) gggCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTc < 1:224250/225‑1 (MQ=255) gggCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGAt > 1:343044/1‑251 (MQ=255) aaTCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCaa < 1:409233/251‑1 (MQ=255) gcggcTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCa < 1:645155/250‑1 (MQ=255) cggcTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCAcc < 1:537477/251‑1 (MQ=255) gCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTgcg > 1:221595/1‑249 (MQ=255) caaGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCAt < 1:658651/251‑1 (MQ=255) aGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAacgg < 1:143124/209‑1 (MQ=255) gCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGa > 1:394407/1‑251 (MQ=255) aTACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAAt < 1:72867/250‑1 (MQ=255) aTACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAAt < 1:174395/250‑1 (MQ=255) cGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACAt > 1:63745/1‑251 (MQ=255) tttCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATc < 1:818090/250‑1 (MQ=255) tttCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATc < 1:410875/250‑1 (MQ=255) gCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATAc < 1:712820/248‑1 (MQ=255) cGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGcc < 1:622439/250‑1 (MQ=255) aaTCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATa < 1:402865/251‑1 (MQ=255) aTCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAg > 1:211078/1‑143 (MQ=255) aaaCATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACaa > 1:672549/1‑251 (MQ=255) aaCATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGtgc < 1:693150/142‑1 (MQ=255) aaCATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACaaa > 1:102600/1‑251 (MQ=255) aaCATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACaaa > 1:499194/1‑251 (MQ=255) aaCATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACaaa > 1:817873/1‑251 (MQ=255) aaCATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACaaa > 1:801597/1‑251 (MQ=255) aCATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAAt > 1:315058/1‑251 (MQ=255) cATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATa > 1:130949/1‑251 (MQ=255) cATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATa > 1:801808/1‑251 (MQ=255) aCTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAAc < 1:61575/251‑1 (MQ=255) gCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACtgtg > 1:5479/1‑250 (MQ=255) aaaTCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGc < 1:759890/251‑1 (MQ=255) ggTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAg > 1:681580/1‑251 (MQ=255) tGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAAcgaaacgcggaataatcc < 1:361927/251‑18 (MQ=255) tGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGt < 1:662756/251‑1 (MQ=255) agaTTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTgg < 1:205911/250‑1 (MQ=255) agaTTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTgg < 1:631693/250‑1 (MQ=255) gCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTgg < 1:198349/241‑1 (MQ=255) cAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGtc < 1:859823/251‑1 (MQ=255) gTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAAt < 1:628207/183‑1 (MQ=255) gTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGcc > 1:495045/1‑221 (MQ=255) ttCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGtccatc > 1:215343/1‑250 (MQ=255) aTTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAAt > 1:378976/1‑250 (MQ=255) aTTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAAt > 1:556755/1‑250 (MQ=255) aTTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATc < 1:362550/251‑1 (MQ=255) aTTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATc < 1:832314/251‑1 (MQ=255) aTTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATc < 1:831181/251‑1 (MQ=255) gATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATc > 1:133264/1‑244 (MQ=255) atcatcatcGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGAt > 1:595198/1‑134 (MQ=255) tcatcatcGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTGTCaaa > 1:345646/1‑251 (MQ=255) catcGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGcc > 1:208815/1‑203 (MQ=255) tcGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAAt > 1:716055/1‑182 (MQ=255) gCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAACGTAATTCGTCCATCCAATCCGTGTCAAACGCCGACGCgg > 1:160425/1‑251 (MQ=255) tAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAATGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACAt > 1:408970/1‑158 (MQ=255) tAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAAt > 1:474587/1‑154 (MQ=255) tAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATAc < 1:8646/164‑1 (MQ=255) tAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATAc > 1:463543/1‑164 (MQ=255) aaTCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTg > 1:161225/1‑139 (MQ=255) aaCTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTGTCAAACGCCGACGCGGCAAGCAAAAt > 1:577824/1‑251 (MQ=255) gtgCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTGTCAAACGCCGACGCGGCAAGCAAAATTTCa > 1:14797/1‑251 (MQ=255) cccGCATATGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTGTCAAACGCCGACGCGGCAAGCAAAATTTCAttt < 1:779090/251‑1 (MQ=255) catctGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGT‑CATCCAATCCGTGTCAAACGCCGACGCGGCAAGCAAAATTTCATTTTccg > 1:535798/5‑250 (MQ=255) atGTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCg > 1:305571/1‑189 (MQ=255) gTTTCATCACGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAAc < 1:614156/164‑1 (MQ=255) tcatcaCGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTGTCAAACGCCGACGCGGCAAGCAAAATTTCATTTTCCGCcggcgg > 1:320728/1‑250 (MQ=255) aCGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGaaa > 1:784596/1‑123 (MQ=255) cGTCATGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGt < 1:694175/172‑1 (MQ=255) aTGGTGTTTTTGCAAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTGTCAAACGCCGACGCGGCAAGCAAAATTTCATTTTCCGCCGGCGGCATCAGttgct < 1:5809/251‑1 (MQ=255) | TTTTTAGGGTGAATTTTAACTTATCCGATAATACAGGAAACGATAAGATTTGCGCACGAAGGGCACAATCCACATGATGGCGGCTTGCAACAAGCCGATACGTTTCCAGGCGGGAAAATCAAACATATACTTCGCCGAAATCAGGTGGAGATTATCCGCCCAACGTTCCATTTCATGATCATCATCGCAGCCGTAATCAAACTGTGCCCGCATATGTTTCATCACGTCATGGTGTTTTTGCGAATTGCGACTCATCCAAGTGCTGCCGATGTCAAAGGCGATTTCGCCACCACTAAAACGGACGGCAAGATCTTCAAACAGCTTTTTCACCTGCGCTTCATTGAAATACATCAATACGCCTTCAATAACAAATAAAAACTGTGCCTGCGGATAGGTGGAGCGTAATTCGTCCATCCAATCCGTATCAAACGCCGACGCGGCAAGCAAAATTTCATTTTCCGCCGGCGGCATCAGTTGCT > 1/1567251‑1567729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |