Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,534,593 A→C S103S (TCA→TCC)  unknown → Putative preQ0 transporter YhhQ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,534,5930AC100.0% 196.9 / NA 70S103S (TCA→TCC) unknownPutative preQ0 transporter YhhQ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (32/38);  total (32/38)

TTCTTCCACATTTTTATCATCGCCGCCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCAACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTATTCTTCGCTATCGCGTTTTACGCCAGCAACGATC  >  1/1534348‑1534837
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
ttcttcCACATTTTTATCATCGCCGCCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGGGTCCAcc                                                                                                                                                                                                                                                   >  1:340445/1‑249 (MQ=255)
        caTTTTTATCATCGCCGCCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAg                                                                                                                                                                                                                                         >  1:321567/1‑251 (MQ=255)
            tttATCATCGCCGCCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAg                                                                                                                                                                                                                                     <  1:816177/251‑1 (MQ=255)
                    cgccgcCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAAtata                                                                                                                                                                                                                             <  1:452488/251‑1 (MQ=255)
                    cgccgcCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAAtata                                                                                                                                                                                                                             <  1:833656/251‑1 (MQ=255)
                    cgccgcCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAAtata                                                                                                                                                                                                                             <  1:519674/251‑1 (MQ=255)
                        gccAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAggg                                                                                                                                                                                                                         >  1:14039/1‑251 (MQ=255)
                         ccAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAggg                                                                                                                                                                                                                         <  1:570235/250‑1 (MQ=255)
                         ccAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAgg                                                                                                                                                                                                                          <  1:32103/249‑1 (MQ=255)
                            gTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTg                                                                                                                                                                                                                     >  1:234410/1‑251 (MQ=255)
                             tAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTc                                                                                                                                                                                                                                           >  1:604760/1‑228 (MQ=255)
                             tAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTg                                                                                                                                                                                                                     >  1:650863/1‑250 (MQ=255)
                                       gTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAg                                                                                                                                                                                                           >  1:181405/1‑250 (MQ=255)
                                          cAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGa                                                                                                                                                                                                        <  1:180885/250‑1 (MQ=255)
                                                cccTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGTGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCaa                                                                                                                                                                                                 >  1:262541/1‑251 (MQ=255)
                                                cccTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAggg                                                                                                                                                                                                                         <  1:765509/227‑1 (MQ=255)
                                                cccTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCaa                                                                                                                                                                                                 >  1:490926/1‑251 (MQ=255)
                                                 ccTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAAtata                                                                                                                                                                                                                             >  1:241630/1‑222 (MQ=255)
                                                  cTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATc                                                                                                                                                                                               <  1:27761/251‑1 (MQ=255)
                                                    ttGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGAc                                                                                                                                                                                                                                       <  1:580357/209‑1 (MQ=255)
                                                         gTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAggg                                                                                                                                                                                                                         >  1:53777/1‑218 (MQ=255)
                                                          tGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTg                                                                                                                                                                                         <  1:607445/249‑1 (MQ=255)
                                                           gCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATc                                                                                                                                                                                               <  1:632349/242‑1 (MQ=255)
                                                                     ttGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGc                                                                                                                                                                            <  1:549767/251‑1 (MQ=255)
                                                                        aCGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCgg                                                                                                                                                                          <  1:151893/250‑1 (MQ=255)
                                                                        aCGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCgg                                                                                                                                                                          <  1:139484/250‑1 (MQ=255)
                                                                             cTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCaa                                                                                                                                                                    >  1:510080/1‑251 (MQ=255)
                                                                                       caGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTgcg                                                                                                                                                           >  1:83953/1‑250 (MQ=255)
                                                                                                  cATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCAcc                                                                                                                                                                                                                                                   >  1:93586/1‑151 (MQ=255)
                                                                                                     gTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGa                                                                                                                                             >  1:750102/1‑250 (MQ=255)
                                                                                                      tttCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGAc                                                                                                                                            <  1:726102/250‑1 (MQ=255)
                                                                                                               aCGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGa                                                                                                                                  <  1:114865/251‑1 (MQ=255)
                                                                                                               aCGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGa                                                                                                                                  >  1:785864/1‑251 (MQ=255)
                                                                                                                  tGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTAtt                                                                                                                                                                                           <  1:601875/191‑1 (MQ=255)
                                                                                                                    gggCACACTAACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGGGTGTTCGGCGCCAAAGAAGCGCGCTGGATTATTTTCGTAGTAATGATTCCGGCGTTAATTATCAGCTATGTAGTTTCCACGCTATTTTCAGACAGCCAATACCAAGGCTGGCAGGCATTAACTGCGTTCAACTTATTCGTGTTCCGCATCGCACTGGCAAGTTTCTGCGCCTATGTGTTCGGGCAATTATTAGATGTAt                                                                                                                             >  1:558413/1‑251 (MQ=255)
                                                                                                                        acacTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCgg                                                                                                                                                                          >  1:161915/1‑202 (MQ=255)
                                                                                                                         cacTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGgtg                                                                                                                        <  1:227505/251‑1 (MQ=255)
                                                                                                                               ccTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAAt                                                                                                                  <  1:10469/251‑1 (MQ=255)
                                                                                                                                        ttATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCAccc                                                                                                                                                                                                                                                  <  1:658538/114‑1 (MQ=255)
                                                                                                                                               ccTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTc                                                                                                                                                               >  1:630101/1‑190 (MQ=255)
                                                                                                                                                        aGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAAcc                                                                                             <  1:193573/247‑1 (MQ=255)
                                                                                                                                                         gATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAggg                                                                                                                                                                                                                         >  1:41535/1‑122 (MQ=255)
                                                                                                                                                         gATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCtggtg                                                                                        >  1:586569/1‑251 (MQ=255)
                                                                                                                                                          aTTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTAt                                                                                                                                                                                      >  1:634297/1‑156 (MQ=255)
                                                                                                                                                                     cgcgTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTACGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGa                                                                             >  1:451692/1‑250 (MQ=255)
                                                                                                                                                                          gtTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGa                                                                                                                                  >  1:539665/1‑192 (MQ=255)
                                                                                                                                                                                tGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATgg                                                                 <  1:53857/251‑1 (MQ=255)
                                                                                                                                                                                tGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATgg                                                                 <  1:398287/251‑1 (MQ=255)
                                                                                                                                                                                                 ggATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCTATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCAc                                                                                >  1:654377/1‑219 (MQ=255)
                                                                                                                                                                                                 ggATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAAcc                                                                                             <  1:321417/206‑1 (MQ=255)
                                                                                                                                                                                                 ggATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATgg                                                                 <  1:361807/234‑1 (MQ=255)
                                                                                                                                                                                                 ggATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATgg                                                                 <  1:860481/234‑1 (MQ=255)
                                                                                                                                                                                                 ggATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATgg                                                                 <  1:307782/234‑1 (MQ=255)
                                                                                                                                                                                                  gATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTTTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATgc                                                                 >  1:459525/1‑232 (MQ=255)
                                                                                                                                                                                                               gTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACttatttat                                   <  1:290982/250‑1 (MQ=255)
                                                                                                                                                                                                                tAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTAttc                                 <  1:44747/251‑1 (MQ=255)
                                                                                                                                                                                                                    gATTCCGGCGTTAATCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGGGGATTGCACCGACCAGTTCTATGGGGTTCGGTTCCATGCGGGATACTTATTTATTCTTCg                             >  1:160294/1‑251 (MQ=255)
                                                                                                                                                                                                                                aaTCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACttattt                                     >  1:221223/1‑231 (MQ=255)
                                                                                                                                                                                                                                aaTCATCAGTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTAttc                                 <  1:126656/235‑1 (MQ=255)
                                                                                                                                                                                                                                        gTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTgg                                                                                                                          <  1:558222/138‑1 (MQ=255)
                                                                                                                                                                                                                                        gTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGAt                                             <  1:350487/215‑1 (MQ=255)
                                                                                                                                                                                                                                        gTTATGCGGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACttatttat                                   <  1:540300/225‑1 (MQ=255)
                                                                                                                                                                                                                                        gTTATGCAGTGTCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTATTCTTCGCTATCGCGTTTTACGCCAg          >  1:734895/1‑250 (MQ=255)
                                                                                                                                                                                                                                                gtgtCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTc                                                                      >  1:787908/1‑182 (MQ=255)
                                                                                                                                                                                                                                                gtgtCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACttatttat                                   <  1:111006/217‑1 (MQ=255)
                                                                                                                                                                                                                                                gtgtCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTAttc                                 >  1:785124/1‑219 (MQ=255)
                                                                                                                                                                                                                                                gtgtCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTATTCTTCGCTATCGCGTTTTACg              <  1:247195/238‑1 (MQ=255)
                                                                                                                                                                                                                                                gtgtCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTATTCTTCGCTATCGCGTTTTACGCCAGCaa       <  1:873944/245‑1 (MQ=255)
                                                                                                                                                                                                                                                gtgtCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTATTCTTCGCTATCGCGTTTTACGCCAGCa        <  1:35133/244‑1 (MQ=255)
                                                                                                                                                                                                                                                gtgtCCACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTATTCTTCGCTATCGCGTTTTACGCCAGCAACGATc  >  1:415987/1‑250 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
TTCTTCCACATTTTTATCATCGCCGCCAGTAACTATCTCGTGCAGATTCCCTTTGAAGTGCATGTGCCGTTGACGTTCTTTGGCGCACAGGAAGACTTCATGTTTCACAGCACGTGGGGCACACTGACCTTCCCGTTTATTTTCCTGGCGACAGATTTAACCGTTCGCGTGTTCGGTGCCAAAGAAGCGCGCTGGATTATTTTCGTGGTAATGATTCCGGCGTTAATCATCAGTTATGCGGTGTCAACCCTGTTTTCAGACAGCCAATATAAGGGTTTGCAGGCATTAGCGACATTCAATCTATTTGTATTCCGTATTGCGGTGGCAAGTTTCTGCGCCTATGTATTCGGACAATTATTAGACGTATTGGTGTTTAATCGCTTACGCCAACTAAAAACCTGGTGGATTGCACCGACCAGTTCTATGGTGTTCGGTTCCATGGCGGATACTTATTTATTCTTCGCTATCGCGTTTTACGCCAGCAACGATC  >  1/1534348‑1534837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑