| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,519,130 | C→T | noncoding (48/85 nt) | unknown → | tRNA‑Tyr‑GTA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,519,130 | 0 | C | T | 100.0% | 221.8 / NA | 81 | noncoding (48/85 nt) | unknown | tRNA‑Tyr‑GTA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (44/37); total (44/37) | |||||||||||
AATTAAACGAATAATTGAAAAAAACTTTATTTACTAAAAAAAAACTTGTCAGGCATGAAAAAAGCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTT > 1/1518884‑1519364 | aaTTAAACGAATAATTGAAAAAAACTTTATTTACTAAAAAAAAACTTGTCAGGCATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAg > 1:685977/1‑251 (MQ=255) gAAAAAAACTTTATTTACTAAAAAAAAACTTGTCAGGGATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGaa > 1:386546/1‑251 (MQ=255) cTTTATTTACTAAAAAAAAACTTGTCAGGCATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTtctc < 1:672806/251‑1 (MQ=255) cTTGTCAGGCATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAagag < 1:662172/251‑1 (MQ=255) cTTGTCAGGCATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAagag < 1:787097/251‑1 (MQ=255) tGTCAGGCATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTccacc < 1:882355/237‑1 (MQ=255) ggCATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCACAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGa > 1:434838/1‑251 (MQ=255) gCATGAAAAAATCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGAt > 1:213254/1‑251 (MQ=255) aaaaaaTCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGa > 1:568464/1‑250 (MQ=255) tcccTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGa > 1:280543/2‑251 (MQ=255) cTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATg > 1:134245/1‑247 (MQ=255) cTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAAtt > 1:719130/1‑251 (MQ=255) cTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAAtt > 1:836889/1‑251 (MQ=255) tataATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTa < 1:296461/251‑1 (MQ=255) tataATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTa < 1:671637/251‑1 (MQ=255) ataataCGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAagag > 1:727731/1‑227 (MQ=255) aataCGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGa < 1:238950/251‑1 (MQ=255) cgcgTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTccacc > 1:125134/1‑209 (MQ=255) tttCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGtat < 1:261313/251‑1 (MQ=255) aCGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTTTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATgg < 1:443987/251‑1 (MQ=255) aCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCCTCGGATAATGGCTAttt > 1:161416/1‑250 (MQ=255) aCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTa > 1:886172/1‑251 (MQ=255) aCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGGATAATGGCTATTa > 1:649499/1‑251 (MQ=255) cTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTAc < 1:50337/251‑1 (MQ=255) gCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAg > 1:708379/1‑218 (MQ=255) cTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCg < 1:221952/231‑1 (MQ=255) tCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGc < 1:724524/239‑1 (MQ=255) tCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAAATGCCATTACCTTAg > 1:606175/1‑250 (MQ=255) cAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGaa < 1:753440/154‑1 (MQ=255) cAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAag < 1:80241/188‑1 (MQ=255) cAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCACCGTAAAAAGGCTATTACCTTAGc > 1:81653/1‑250 (MQ=255) aggtagAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGTCCACGTATAATGGCCTTTTCCTTAGCCTTc > 1:527078/1‑250 (MQ=255) gagCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAAAGGGTATTACCTTAGCCTTcccaac > 1:661639/1‑246 (MQ=255) agCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCt < 1:734372/250‑1 (MQ=255) gACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTccacc > 1:282484/1‑161 (MQ=255) gACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATTAcg > 1:695800/1‑250 (MQ=255) cTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATg > 1:264711/1‑189 (MQ=255) cTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTAc < 1:862231/225‑1 (MQ=255) cTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCCTCCAAGCTAATGACGCgg > 1:177609/1‑251 (MQ=255) gTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTctccct > 1:705851/1‑151 (MQ=255) cAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGAtt > 1:257751/1‑251 (MQ=255) gTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGAt < 1:90278/248‑1 (MQ=255) gTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAAAGGCTATTAACTTAGCCTTCCAAACTAATGAAGCGGGGTCGAttt > 1:747212/1‑249 (MQ=255) tAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTcc < 1:202248/250‑1 (MQ=255) gTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAagag < 1:741984/157‑1 (MQ=255) gTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGGATAATGGCTATTACCCTAGCCTTCCAAACTAATGACACGGGGTCGATTccccc > 1:584880/1‑248 (MQ=255) gTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATg > 1:609675/1‑168 (MQ=255) cggtagaggaaatcATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGCAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAgcgc < 1:425460/237‑1 (MQ=255) aGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTAACTTTGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCCCTGCCCGCCCCCAGCGCTGata > 1:103247/1‑251 (MQ=255) tCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCCGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGatat < 1:444620/250‑1 (MQ=255) gCACCATTTCCCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGCTTCCCGCTGCCCGCTCCAAGCGCTGATATAGc < 1:409139/250‑1 (MQ=255) ccATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGata < 1:755769/243‑1 (MQ=255) tttCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTg < 1:582311/251‑1 (MQ=255) tttCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTg < 1:144621/251‑1 (MQ=255) tcGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTa > 1:78542/1‑145 (MQ=255) cAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCGCTGCCCGCCCCCAGCGCTGATATAGCTCCGTTGGTagagg > 1:152328/1‑250 (MQ=255) aTACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTa < 1:177776/113‑1 (MQ=255) aGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCCTCGTATAAAGGCTATTACCTTTGCCTTCCAAGATAATGACGCGGGGTTGATTCCCCCTGCCCCCCCCCAGCGCTGCTATAGATCAGGTGGGAGAGCGCA‑ccc > 1:799671/1‑250 (MQ=255) aaaCTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTa < 1:210133/251‑1 (MQ=255) aaCTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCt < 1:631411/176‑1 (MQ=255) aaCTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGAcg < 1:410105/183‑1 (MQ=255) aaCTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTaa < 1:772700/251‑1 (MQ=255) aaCTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTTGATTCCCCCTGCCCGCTCCCAGCGCTGATATAGCTCAGTTGGTag > 1:257506/1‑235 (MQ=255) aCTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTAAg < 1:62220/251‑1 (MQ=255) ttAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTAAggg < 1:114794/251‑1 (MQ=255) gagTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTTGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCGCCGCCCGCTCCCAGCGCCGATATAGCTCCGTTGGTAGAGCGCA‑CCCCTGGTAAgggggg > 1:251509/1‑248 (MQ=255) ggAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGc < 1:374648/214‑1 (MQ=255) gAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCGCTGCCCGCTCCAAACGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCCTGGTAAGGGGGAggg > 1:639597/1‑248 (MQ=255) gATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCGCTGCCCGCTCCCAGCGCTGATATAGCTCAGTTGGTAGAGGGCA‑CCCTTGGGAAGGGGGGGGTCGGccg > 1:216375/1‑249 (MQ=255) aTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGCATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTTCCGCTGCCCGCTCCAAGCGCCGATATAACTCAGTTGGTAGAGCGCA‑CCCCTGGGAAGGGGGAGGTCGGCAgg > 1:226315/1‑250 (MQ=255) gCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTAc < 1:653897/133‑1 (MQ=255) gCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCCAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTAAGGGGGAGGGCGGCAGTTCGAATCTGc > 1:204028/1‑250 (MQ=255) gCCAAAGGGAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCGCCGCCCGCTCCCAGCGCTGATATAGCTCACTTGGTAGAGGGCA‑CCCTTGGTAAGGGGGGGGTCGGCAGTTCGAATCTGc > 1:15210/1‑250 (MQ=255) gggAGCAGACTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAAc < 1:851541/101‑1 (MQ=255) aCTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCCATTACCTTAGCCTTCCAAGCTAATGa > 1:715722/1‑140 (MQ=255) cTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTAtt < 1:373129/116‑1 (MQ=255) cTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCGCTGCCCGCCCCAAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTAAg > 1:476166/1‑210 (MQ=255) cTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCCCTGCCCGCTCCCAACGCTGATATAGCTCAGTTGGGAGAGCGCA‑CCCCTGGTAAGGGGGAGGGCGGCAGTTCGGATCTGCCTATCAGcaccacct > 1:71278/1‑248 (MQ=255) cTGTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAACTAATGACGCGGGGTCGATTCCCGCTTCCCGCCCCAAGCGCTGATATAGCTCAGTTGGGAGAGCGCACCCCTTGG‑AAGGGGGAGGGCGGCAGGTCGAATCTTCCTATCAGCACCActt > 1:792596/1‑250 (MQ=255) gTAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGGTCGATTCCCGCTGCCCGCTCCCAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCCTGGTAAGGGGGGGGGCGGGAGTTCGGATc > 1:266287/1‑230 (MQ=255) tAAATCTGCCGGTTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTGTCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGc < 1:728634/179‑1 (MQ=255) | AATTAAACGAATAATTGAAAAAAACTTTATTTACTAAAAAAAAACTTGTCAGGCATGAAAAAAGCCCTATAATACGCGTCACTTGTTTTCGACGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCATCAGTTCGATTCCGATAGTCGGCACCATTTCTCGCAATACAAGTTCAAACTTAGAGTGGAGGGATTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGGCTCAGCCTTCGAAGGTTCGAATCCTTCTCCCTCCACCATTATCTAAGAGTAACCGATGGGACAGATGAATTAAGAACGGCGGGCATCGTATAATGGCTATTACCTTAGCCTTCCAAGCTAATGACGCGGGTTCGATTCCCGCTGCCCGCTCCAAGCGCTGATATAGCTCAGTTGGTAGAGCGCA‑CCCTTGGTAAGGGTGAGGTCGGCAGTTCGAATCTGCCTATCAGCACCACTT > 1/1518884‑1519364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |