| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 276,129 | C→T | V178V (GTG→GTA) | unknown ← | Peptidoglycan lipid II flippase MurJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 276,129 | 0 | C | T | 100.0% | 234.3 / NA | 85 | V178V (GTG→GTA) | unknown | Peptidoglycan lipid II flippase MurJ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (37/48); total (37/48) | |||||||||||
TATCCAGTAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCACGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAAAAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCCACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGCCCGTCCCGAAAATCGCCGCCACGACGGGCGATCCGATCATCGCCAGCAAAGTGACGATGGTAAC > 1/275885‑276374 | tATCCAGTAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACAt < 1:752776/249‑1 (MQ=255)tATCCAGTAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCGTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACAt < 1:445642/249‑1 (MQ=255) cAGTAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagca > 1:824921/1‑251 (MQ=255) gTAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagcag > 1:250449/1‑250 (MQ=255) tAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagcag < 1:898945/249‑1 (MQ=255) tAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagcag < 1:877540/249‑1 (MQ=255) aaCAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGcac < 1:47623/251‑1 (MQ=255) aaCAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGcac < 1:485122/251‑1 (MQ=255) cAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACAt > 1:494250/1‑239 (MQ=255) ttgagttgGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCg < 1:377715/250‑1 (MQ=255) tgGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACAt > 1:778909/1‑229 (MQ=255) gCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGAc < 1:738959/250‑1 (MQ=255) aCCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGAc < 1:853986/251‑1 (MQ=255) cGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAAc < 1:701141/251‑1 (MQ=255) acaacGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCg < 1:472025/251‑1 (MQ=255) acGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAATTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCg > 1:509358/1‑222 (MQ=255) acGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAgg > 1:691137/1‑251 (MQ=255) acGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAgg > 1:280652/1‑251 (MQ=255) gggATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGc < 1:597557/232‑1 (MQ=255) gATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTa > 1:897341/1‑251 (MQ=255) gATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTa > 1:142907/1‑251 (MQ=255) gATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTa > 1:252669/1‑251 (MQ=255) tcatcaATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCg > 1:414154/1‑239 (MQ=255) tcatcaATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTaaa < 1:492106/251‑1 (MQ=255) atcaATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAAt < 1:38430/251‑1 (MQ=255) tcaATGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagc > 1:596770/1‑200 (MQ=255) aTGTGCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATcgcg > 1:583331/1‑251 (MQ=255) gCGAATTTTCTTCACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGcac > 1:573926/1‑198 (MQ=255) cttcACGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagcag < 1:868/186‑1 (MQ=255) cGCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagc < 1:209313/179‑1 (MQ=255) gCCTTCGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagcag < 1:827190/180‑1 (MQ=255) ccTTCGTCATGCCATGCCCCCTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAAt < 1:712605/227‑1 (MQ=255) cGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCg > 1:332404/1‑183 (MQ=255) cGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAAt < 1:144030/223‑1 (MQ=255) cGTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACaa > 1:42179/1‑243 (MQ=255) gTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTg > 1:665039/1‑169 (MQ=255) gTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAg > 1:157167/1‑210 (MQ=255) gTCATGCCATGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAAt < 1:592468/222‑1 (MQ=255) gCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACAt < 1:81337/157‑1 (MQ=255) cccACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCataaata < 1:756722/250‑1 (MQ=255) cACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAgg < 1:738767/251‑1 (MQ=255) aCTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAggg < 1:872011/251‑1 (MQ=255) aCTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAggg < 1:608518/251‑1 (MQ=255) tGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAgg < 1:195839/251‑1 (MQ=255) gCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGt < 1:869600/250‑1 (MQ=255) cACCAATAATTTGGCTTTATATAAGAACGGCGGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACAGGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGGGAttt > 1:486335/1‑251 (MQ=255) cACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAggg > 1:551186/1‑241 (MQ=255) cACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAggg < 1:59837/241‑1 (MQ=255) cACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGAttt > 1:390776/1‑251 (MQ=255) ccAATAATTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTg > 1:315726/1‑251 (MQ=255) ataatTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGc < 1:602642/251‑1 (MQ=255) taatTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTAcc < 1:399591/177‑1 (MQ=255) aatTTGGCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGcaa > 1:271899/1‑251 (MQ=255) ggCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACg > 1:415259/1‑251 (MQ=255) gCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACAt > 1:765714/1‑130 (MQ=255) gCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAg < 1:39052/150‑1 (MQ=255) gCTTTATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAgg > 1:759008/1‑208 (MQ=255) ttATATAAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAgg > 1:329034/1‑250 (MQ=255) atataAGAACGGCAGTTGGGACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAAt < 1:165783/180‑1 (MQ=255) atataAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagc < 1:498532/130‑1 (MQ=255) atataAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACGAAGGTCACGAACCATAAATAAGGGAAGGt > 1:207201/1‑228 (MQ=255) atataAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCtt > 1:395108/1‑251 (MQ=255) atataAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCtt > 1:361882/1‑251 (MQ=255) atataAGAACGGCAGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCtt > 1:811263/1‑251 (MQ=255) aGTTGGAACAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCataaata > 1:509306/1‑206 (MQ=255) aaaTTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGAc < 1:154317/251‑1 (MQ=255) aaaTTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGAc < 1:728115/251‑1 (MQ=255) aaaTTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGAc < 1:603938/251‑1 (MQ=255) aaaTTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGAc < 1:293663/251‑1 (MQ=255) gccgccGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGc > 1:468631/1‑250 (MQ=255) ccgccgAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGcc < 1:848509/250‑1 (MQ=255) ccgccgAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGcc < 1:158602/250‑1 (MQ=255) ccgccgAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGc < 1:2588/249‑1 (MQ=255) gaAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGagc < 1:336351/86‑1 (MQ=255) gaAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCcaca > 1:638131/1‑251 (MQ=255) cGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCATAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGccc < 1:446457/251‑1 (MQ=255) cGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGccc < 1:568007/251‑1 (MQ=255) gCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTc < 1:96815/216‑1 (MQ=255) tttttCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGAc < 1:765004/199‑1 (MQ=255) accaaAGTGCGGTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGCCCGTCCCGaaa < 1:129776/218‑1 (MQ=255) gTAGCAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAAcc > 1:151325/1‑193 (MQ=255) cAATCATCGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGCCCGTCCCGAAAATCGCCGCCACGACGGGCGATCCGATCATCGCCAGCAAAGTGACGAt < 1:568429/250‑1 (MQ=255) catcGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTaaa > 1:54336/1‑64 (MQ=255) tcGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGCCCGTCCCGAAAATCGCCGCCACGACGGGCGATCCGatca < 1:794950/225‑1 (MQ=255) tcGCTACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGCCCGTCCCGAAAATCGCCGCCACGACGGGCGATCCGATCATCGCCAGCAAAGTGACGATGGTaac > 1:688995/1‑250 (MQ=255) | TATCCAGTAACAAGTTGAGTTGGCTGACCGACACGCCGAACAACGCAGGGATCATCAATGTGCGAATTTTCTTCACGCCTTCGTCATGCCACGCCCACTTTGGCTTCACCAATAATTTGGCTTTATATAAGAACGGCAGTTGGAAAAGAAATTGCAACAAGCCGCCGAGAAAGATCCCGATTGCCAAGCCTAAATCAGGATTTTTCAGCTGCGGCGCCAACCAAAGTGCGGTAGCAATCATCGCCACATTGAGCAGCACAGGCGAAAAGGACATGACGCCGAACTTACCGAGGGTGTTTAAAATCGCGCCGGACAGCGCCACAAAGGTCACGAACCATAAATAAGGGAAGGTGATTTTGAGCAACAACGAGGCTTGGGTGAATTTTTCCGCGTTAGGACCGTCATTAAGCCAATCCACAAACCAGCCCGTCCCGAAAATCGCCGCCACGACGGGCGATCCGATCATCGCCAGCAAAGTGACGATGGTAAC > 1/275885‑276374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |