| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 270,352 | C→G | V138L (GTG→CTG) | unknown ← | Lipoprotein signal peptidase (EC 3.4.23.36) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 270,352 | 0 | C | G | 96.7% | 157.2 / ‑5.4 | 61 | V138L (GTG→CTG) | unknown | Lipoprotein signal peptidase (EC 3.4.23.36) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (45/14); minor base A (0/2); total (45/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
CGCTCACGCAAGCCGTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCACGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGCAAGGAAAAAGAATTTTTGCCAA > 1/270115‑270569 | cgcTCACGCAAGCCGTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACggg < 1:542494/250‑1 (MQ=255)cgcTCACGCAAGCCGTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGa > 1:668943/1‑251 (MQ=255) cTCACGCAAGCCGTTCACCACGAAACGGTTATGCCCCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGAt < 1:310391/250‑1 (MQ=255) cGCAAGCCGTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATg > 1:358032/1‑250 (MQ=255) cAAGCCGTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACAGAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGcc < 1:145050/250‑1 (MQ=255) ccGTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATc > 1:563113/1‑250 (MQ=255) gTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAa‑c > 1:380074/1‑231 (MQ=255) ccacGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATcc > 1:249621/1‑244 (MQ=255) ccacGAAACGGTTATGCACCACTTCATGCCGCACACAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACACATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAAt > 1:423688/1‑251 (MQ=255) cGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATcc < 1:40003/236‑1 (MQ=255) gTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTaa > 1:418163/1‑251 (MQ=255) gCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCAATATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATcc > 1:128733/1‑229 (MQ=255) caccacTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAAt > 1:154284/1‑250 (MQ=255) acTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACCCAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATccac > 1:359591/1‑250 (MQ=255) cTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGAtc < 1:751628/213‑2 (MQ=255) gCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGAt > 1:111965/1‑203 (MQ=255) gCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATcc > 1:504915/1‑238 (MQ=255) acaTAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGa > 1:728413/1‑251 (MQ=255) caTAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGAt > 1:167232/1‑251 (MQ=255) tAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATa > 1:202427/1‑250 (MQ=255) tAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATa > 1:390859/1‑250 (MQ=255) aaaaggggCGCACCGTGAATTCCCACCGCCATTTCTACGATGCTGATAGCACGACCCCCGCCGGCAAAGACCCCGCGCGGGTTGGTTAAAATATTTTTCATTATTTCCATTCCTTTTTATTGCCTTTTTTGACCGCATCCAAGGCAACCAAACCGGCCCCCCCACAAAGGCC‑AATACCCGCCGGTTT‑AAA‑CCCGGGATAATCCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATAc < 1:191372/246‑1 (MQ=255) aaaagggccccACCGTAAATTCCCAGCGCCATTTCTACGATGCGGATAGCACAATCCACGCCGGCAAAGACCCCGCGGGGGTGGGCTAAAATATTTTTCATTATTTAAATTCCTTTTTATTGCCGTTTTAAAACGCACCAAAGGAAAACAAACCGCCACCCACACAAATGGC‑AATA‑CCCACAAGTTAAAA‑CAGGGAATAAGGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATAc < 1:509353/241‑1 (MQ=255) aaaaTGGGCGCCCCGTGAATTCCCACCGCCATTTCTACGAGGCTGATAGCACGATCCCCGCCGGCACAGACCCCGCGCGGGTTGGATAAAATATTTTTCATTATTTACATTCCTTTTTATTGCCGTTTTTAAACGCACCCAAGGCAATAAACCCGCCACCCACAAAAAGGGA‑AATACCCGCCAGGTA‑AAA‑CAGGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATAc < 1:461264/250‑1 (MQ=255) tGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGc > 1:510656/1‑239 (MQ=255) gTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAa‑cac < 1:895379/179‑1 (MQ=255) gTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATccgccg > 1:857734/1‑250 (MQ=255) cGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGc > 1:619561/1‑177 (MQ=255) ccAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACg > 1:260058/1‑228 (MQ=255) gTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGcgccg > 1:770281/1‑250 (MQ=255) gTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGcgccg > 1:436471/1‑250 (MQ=255) gTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGcgccg > 1:72521/1‑250 (MQ=255) gTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGcgccg > 1:414298/1‑250 (MQ=255) gTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGcgccg > 1:535753/1‑250 (MQ=255) gCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGAc > 1:693364/1‑214 (MQ=255) gCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAgc > 1:849733/1‑229 (MQ=255) aTCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACg > 1:112587/1‑203 (MQ=255) aTCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAggcgg > 1:825750/1‑250 (MQ=255) aTCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAggcgg > 1:154716/1‑250 (MQ=255) ccGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGc > 1:571888/1‑183 (MQ=255) gAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTg > 1:639437/1‑251 (MQ=255) taaaaaaagacaggcaaaaaTATTTTTCATTATTAACATCCTTGTTTATTGCCTTTTTGGACCGCACCAAAGACAATAAAACCGCCCCCCACACAAATGGC‑AATACCCGCCAGGTA‑AAC‑CACGGAAAAATGCAAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTc < 1:741601/235‑1 (MQ=255) ggCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGAttttt > 1:618634/1‑251 (MQ=255) tattTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCaa > 1:50596/1‑251 (MQ=255) tttACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGc < 1:271853/100‑1 (MQ=255) ttACATTCCTTTTTATTGCCTTTTTTGAACGCACCAAAGGCAATAAACCCGCCCCCCACAAAAATGGC‑AATACCCGCCAGGTA‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACg < 1:667062/152‑1 (MQ=255) ttACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACaa > 1:810060/1‑250 (MQ=255) ttCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGtt < 1:797515/78‑1 (MQ=255) ttCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATAc > 1:356550/1‑142 (MQ=255) ttCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATAc > 1:618656/1‑142 (MQ=255) ttCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATc > 1:342340/1‑181 (MQ=255) cttttttGACCGCACCAAAGGCAATCAACCCGCCCCCCACACAAA‑GGCAAATATCCGCCAGGTA‑AAC‑CAGGGGATAATGCAAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGcc < 1:242470/249‑1 (MQ=255) gTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATcc < 1:864979/85‑1 (MQ=255) ttttGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCaa > 1:348694/1‑250 (MQ=255) cATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGCAAGGaaa > 1:619457/1‑251 (MQ=255) cATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGCAAGGaaa > 1:616308/1‑251 (MQ=255) aTCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCg > 1:150511/1‑160 (MQ=255) aTCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGCAAGGaaaa > 1:151212/1‑251 (MQ=255) tataaaggagacagccaccaaaaaaaaTGGA‑AATA‑CCCCCAAGTT‑AAACCACGGGATAATCCTAACCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGCAAGGAAAAAGaa < 1:477142/226‑1 (MQ=255) aaCCGGCACCCACACAAATGGC‑AATATCCGCCAGGCT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGCAAGGAAAAAGAATTTTTGCCaa > 1:385274/1‑251 (MQ=255) cccACACAAATGGC‑AATATCCGCCAGGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGc > 1:44018/1‑221 (MQ=255) | CGCTCACGCAAGCCGTTCACCACGAAACGGTTATGCACCACTTCATGCCGCACATAAATGGGCGCACCGTGAATTTCCAACGCCAGTTCTACGATGCTGATAGCACGATCCACGCCGGCACAGAACCCGCGCGGGTTGGCTAAAATAATTTTCATTATTTACATTCCTGTTTATTGCCGTTTTTGAACGCATCCAAGGCAATCAAACCGGCACCCACACAAATGGC‑AATATCCGCCACGTT‑AAA‑CACGGGATAATGCCAATCCCGCCAATAGAAATCTAAAAAATCCACCACATAGCCGTGATACAGACGATCCGCCGCATTGCCCAAAGCGCCGCCGATAATCAAAGCGTAGGCGGCATTCAGCAGTTTTTGTTCATGGCGATTTTTCATTAAAAAATAAACCAACATGGCGGAAATCCCCACTGCCAACGCAAGGAAAAAGAATTTTTGCCAA > 1/270115‑270569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |