| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 262,503 | T→C | S225P (TCG→CCG) | unknown → | Cell envelope opacity‑associated protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 262,503 | 0 | T | C | 100.0% | 201.9 / NA | 73 | S225P (TCG→CCG) | unknown | Cell envelope opacity‑associated protein A |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/29); total (44/29) | |||||||||||
CCGAAAGCCGGTTTTAAAAATCCTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCTCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCATTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACATCAGGAA > 1/262260‑262745 | ccGAAAGCCGGTTTTAAAAATCCTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCaaa > 1:112611/1‑250 (MQ=255) gTTTTAAAAATCCTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAacac < 1:122004/250‑1 (MQ=255) gTTTTAAAAATCCTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAacac < 1:362326/250‑1 (MQ=255) tttAAAAATCCTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAaca > 1:456632/1‑247 (MQ=255) aTCCTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGcaa < 1:200179/251‑1 (MQ=255) ccTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAacac > 1:532185/1‑239 (MQ=255) aTTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGaaa > 1:333322/1‑250 (MQ=255) tATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCTCAAACCGATAACGCTGTCGCGCAACAACCTGCTGCGGAAACCAATACGc < 1:58336/251‑1 (MQ=255) aTTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTgg > 1:401242/1‑251 (MQ=255) tCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAAc > 1:622375/1‑237 (MQ=255) gCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATAc < 1:379871/205‑1 (MQ=255) cGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACaa < 1:287070/250‑1 (MQ=255) cGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAg < 1:614270/251‑1 (MQ=255) gtgtTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAacac > 1:858900/1‑167 (MQ=255) gtgtTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAgggg > 1:254405/1‑250 (MQ=255) gtgtTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAgggg > 1:685308/1‑250 (MQ=255) gtgtTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGGGGAACAAgggg > 1:421828/1‑250 (MQ=255) tttttATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAaccac < 1:125714/244‑1 (MQ=255) tttttATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGtt < 1:709592/251‑1 (MQ=255) ggATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATg < 1:570894/183‑1 (MQ=255) gATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACg < 1:898910/250‑1 (MQ=255) aTGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGAc < 1:690770/251‑1 (MQ=255) aaaCCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAAc < 1:542565/199‑1 (MQ=255) aaaCCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACaa > 1:300766/1‑250 (MQ=255) aaCCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACACAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACaa > 1:432483/1‑249 (MQ=255) aCCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGa > 1:601664/1‑195 (MQ=255) gCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAAc > 1:460855/1‑192 (MQ=255) gCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGc > 1:240586/1‑214 (MQ=255) cTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAacca > 1:608063/1‑218 (MQ=255) ccGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAacac > 1:66125/1‑127 (MQ=255) ccGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACaa < 1:268832/206‑1 (MQ=255) gTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATaa > 1:469583/1‑251 (MQ=255) gTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAAAACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAaccaccccc > 1:682639/1‑210 (MQ=255) gCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATaaa > 1:137522/1‑250 (MQ=255) cTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACTCAACGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGCTAACACTGTCGCGCAACAACCTGCTGCGGAAACCCACACGCAAAATCTCAATGCCGGACACATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTCCGGCGGCAGAAAATAAACCGGCa > 1:632988/1‑251 (MQ=255) cTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCa > 1:170815/1‑251 (MQ=255) cTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCAATAGAAc > 1:346800/1‑174 (MQ=255) caAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAAc < 1:401350/250‑1 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGcc < 1:170745/146‑1 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAg > 1:505950/1‑156 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAggg < 1:749163/179‑1 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTgcgg < 1:365876/216‑1 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGaa > 1:534743/1‑251 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGaa > 1:370799/1‑251 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGGAGAAAATAAACCGGCAGAAGTCAAACCGGaa > 1:472463/1‑251 (MQ=255) gTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTAAAACCGACCGGGTTGGATAATCTGACCCCGCAAACCGATAAAACGGTCGCGCAACAACCTGCTGCGGAAACCAAGACGCAAAATGTCAATGCCGGGGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGGTGCCGAGCAAACGACAACTGCGGCGGGAGAAAATAAACCGGTAGAAGTCAAACCGGaa > 1:596622/1‑251 (MQ=255) taataaCGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAag < 1:767625/251‑1 (MQ=255) cGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAgggcg > 1:217209/1‑248 (MQ=255) tCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑c < 1:305861/251‑1 (MQ=255) aaTTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCg < 1:326359/251‑1 (MQ=255) aTTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAAc > 1:751204/1‑137 (MQ=255) cagTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAAcc > 1:900185/1‑96 (MQ=255) cagTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGc < 1:181648/172‑1 (MQ=255) cagTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGc > 1:830101/1‑250 (MQ=255) agTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGc > 1:570045/1‑249 (MQ=255) aTCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAag < 1:750679/212‑1 (MQ=255) aTCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAgcg > 1:793954/1‑250 (MQ=255) ccGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAACCCGAGTGAGCCTGCAAAAGCGCaagaag > 1:151231/1‑250 (MQ=255) ccGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGc > 1:49878/1‑250 (MQ=255) ccGTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGc > 1:409376/1‑250 (MQ=255) gTTGAACCGACCGTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAag < 1:673924/202‑1 (MQ=255) accgaccgTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAAc < 1:150520/251‑1 (MQ=255) accgTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACcgcg > 1:206019/1‑251 (MQ=255) accgTGTTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACcgcg > 1:540585/1‑251 (MQ=255) gtgtTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑c < 1:776380/208‑1 (MQ=255) gtgtTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCa > 1:113798/1‑251 (MQ=255) gtTGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCaa > 1:475855/1‑250 (MQ=255) ttGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACa < 1:884454/251‑1 (MQ=255) tGGATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACAt > 1:758038/1‑251 (MQ=255) ggATAATCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACAt > 1:321196/1‑250 (MQ=255) aTCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACATCAGGaa > 1:177316/1‑251 (MQ=255) aTCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACATCAGGaa < 1:762059/251‑1 (MQ=255) aTCTGACCCCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCGTTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACATCAGGaa < 1:616159/251‑1 (MQ=255) | CCGAAAGCCGGTTTTAAAAATCCTGAAAATTGGGCGATTTTAAGTATTCTCCCGCAAAAACATCGTCGCATTTTCGTCGCGCTATTCGGCGTGGTGTTGGTGCTGATTTTTATCTTGTGGATGAAACCAAGCTCCGATACGGTGCAATCTTACGAGCAGCAAAGTAATAACGGCGTGCCGATTCAATTCCAGCAGTTAGACCAATCACAAACCGTTGAACCGACCGTGTTGGATAATCTGACCTCGCAAACCGATAACACTGTCGCGCAACAACCTGCTGCGGAAACCAATACGCAAAATGTCAATGCCGGCGCCATAGAACCGCAAGCGGTGGAACAAGGGGCAACCACCTCCGTTGCTGAGCAAACGACAACTGCGGCGGTAGAAAATAAACCGGCAGAAGTCAAACCGGAAGAGGTCGAAACCATTAAA‑CCGAGTGAGCCTGCAAAAGCGCAAGAAGCCGTCAAACCGCGTCAACATCAGGAA > 1/262260‑262745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |