| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,481,412 | C→T | I6I (ATC→ATT) | unknown → | Flp pilus assembly protein RcpB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,481,412 | 0 | C | T | 100.0% | 155.1 / NA | 55 | I6I (ATC→ATT) | unknown | Flp pilus assembly protein RcpB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (28/27); total (28/27) | |||||||||||
TTCTTTCTTCCGTAGTGCAACAACTGAGCGCGATAAAAAAGAGTTAGTTATCGTGGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTATTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAAACATTAACATCTAACTTCTTAAAAAATAGTGGGTTCATACAATGAGAAAATTAGTTATCACGGCCTCCATTGCATTGGCCTCAATTACCGCCCCGGTAACAACATTTGCAATCAGTGAATTTGTTAACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCGATCGTTATGTATTACCGGATTACTCTAATGTCAGTTATAGTAATTTATTTAATTCCGTTATTCGTGATATAGGTAGTAACAACCAAAAGCAA > 1/1481179‑1481631 | ttctttctTCCGTAATGCAACAACTGAGCGCGATAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCcattgcat < 1:390986/250‑1 (MQ=255)ttctttctTCCGTAATGCAACAACTGAGCGCGATAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCcattgcat < 1:677226/250‑1 (MQ=255)ttctttctTCCGTAATGCAACAACTGAGCGCGATAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCcattgcat < 1:299605/250‑1 (MQ=255) ttcttcCGTAATGCAACAACTGAGCGCGATAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGc > 1:524493/1‑250 (MQ=255) atGCAACAACTGAGCGCGATAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTatcg > 1:25320/2‑248 (MQ=255) acaacTGAGCGCGATAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACgg < 1:477827/219‑1 (MQ=255) aTAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACgg < 1:47135/206‑1 (MQ=255) aTAAAAAAGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTg < 1:277222/251‑1 (MQ=255) aaaaaaGAGTTAGTTATCGTAGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCa > 1:743436/1‑251 (MQ=255) aCAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTatcg > 1:47207/1‑204 (MQ=255) cAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAGTGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGa > 1:26189/1‑251 (MQ=255) tagtaAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGcac < 1:315531/251‑1 (MQ=255) taAAACCGGTAAATGAAAAAGATGTTGTTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAAc < 1:569516/251‑1 (MQ=255) aCCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTacac < 1:886097/251‑1 (MQ=255) aaaaCCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGt < 1:480649/251‑1 (MQ=255) aaCCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGTCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTa > 1:676821/1‑251 (MQ=255) aaCCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCg > 1:424317/1‑248 (MQ=255) gAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATg > 1:830495/1‑248 (MQ=255) aaCAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTAt < 1:685583/250‑1 (MQ=255) cAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTAc < 1:610757/251‑1 (MQ=255) ggAAAGATTCTTCCATACGACTCCGTTAAAGATTGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCcattgcat > 1:403531/1‑121 (MQ=255) gATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTc < 1:229865/226‑1 (MQ=255) aTTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTattc < 1:143061/251‑4 (MQ=255) cttcCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGt > 1:750070/1‑217 (MQ=255) cttcCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTcaat > 1:500870/1‑222 (MQ=255) cttcCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGt > 1:758341/1‑233 (MQ=255) tcCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTAt < 1:386682/233‑1 (MQ=255) tcCATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATg < 1:438033/251‑1 (MQ=255) ccATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTatcg < 1:5970/124‑4 (MQ=255) ccATACGACTCCGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCg < 1:761327/237‑1 (MQ=255) ccGTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTAtt < 1:407852/223‑1 (MQ=255) gTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTcaa < 1:845507/209‑3 (MQ=255) gTTAAAGAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGt > 1:5876/1‑218 (MQ=255) gAATGTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCg > 1:359177/1‑219 (MQ=255) gTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTa > 1:730276/1‑205 (MQ=255) gTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATg > 1:160/1‑228 (MQ=255) gTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATGt < 1:882225/229‑1 (MQ=255) gTTTATTACAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATGTCAGTTATAGTAATTTATTCAAt > 1:801448/1‑251 (MQ=255) ttaCAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAAt > 1:735330/1‑165 (MQ=255) ttaCAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAg > 1:542475/1‑190 (MQ=255) ttaCAAGACATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTAttct < 1:855606/219‑1 (MQ=255) cATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTcaa < 1:465160/186‑3 (MQ=255) cATTAACATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTAc > 1:382933/1‑200 (MQ=255) aCATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTAcc < 1:465830/196‑1 (MQ=255) cATCTAACTTCTTAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTAtt < 1:600156/192‑1 (MQ=255) cttcttAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATGTCAGTTATAGTAATTTATTCAATTCTGTCATTCGTGATATAGGTAGTaa < 1:508324/251‑1 (MQ=255) tcttAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAAt < 1:503614/142‑1 (MQ=255) tcttAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTcaat > 1:868363/1‑169 (MQ=255) cttAAAGAATAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTg > 1:353717/1‑145 (MQ=255) gaaTAGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATGTCAGTTATAGTAATTTATTCAATTCTGTCATTCGTGATATAGGTAGTAACAACCaaaa > 1:504045/2‑251 (MQ=255) aGTGGGTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATGTCAGTTATAGTAATTTATTCAATTCTGTCATTCGTGATATAGGTAGTAACAACCAAAAACaa > 1:211/1‑251 (MQ=255) ggTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAg > 1:867137/1‑129 (MQ=255) ggTTCATACAATGAGAAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTacac > 1:309365/1‑146 (MQ=255) gagaAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGAt > 1:528979/1‑163 (MQ=255) gaAAATTAGTTATTACGGCCTCCATTGCATTGGCCTCAATTATCGTTCCGGCAAAAACATTTGCAATCAATGAATTTGTTGACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCAATCGTTATGTATTACCGGATTATTCTAATGTCAGTTATAg > 1:121544/1‑181 (MQ=255) | TTCTTTCTTCCGTAGTGCAACAACTGAGCGCGATAAAAAAGAGTTAGTTATCGTGGCAACAGTAAATGTAGTAAAACCGGTAAATGAAAAAGATGTTATTTACCCTGATTTTGAAAAAACCGGAACAATGGAAAGATTCTTCCATACGACTCCGTTAAAGAATGTTTATTACAAAACATTAACATCTAACTTCTTAAAAAATAGTGGGTTCATACAATGAGAAAATTAGTTATCACGGCCTCCATTGCATTGGCCTCAATTACCGCCCCGGTAACAACATTTGCAATCAGTGAATTTGTTAACGATACGACTGTTGCACAACCGGTACAAAATAGTGAATTTAATCGTACACAGTTAGTCGATCGTTATGTATTACCGGATTACTCTAATGTCAGTTATAGTAATTTATTTAATTCCGTTATTCGTGATATAGGTAGTAACAACCAAAAGCAA > 1/1481179‑1481631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |