| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 217,052 | T→C | V17A (GTG→GCG) | unknown → | Cytochrome c‑type heme lyase subunit nrfE, nitrite reductase complex assembly |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 217,052 | 0 | T | C | 100.0% | 230.2 / NA | 85 | V17A (GTG→GCG) | unknown | Cytochrome c‑type heme lyase subunit nrfE, nitrite reductase complex assembly |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (45/40); total (45/40) | |||||||||||
CGAGTTTACAAAATTTCCGTGAAGCAAATTCAATGGAACAAGGGAAATAAGGCAAAACAGGGTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGTGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGTTCCATGTTGTTT > 1/216810‑217296 | cgaGTTTACAAAATTTCCGTGAAGCAAATTCAATGGAACAAGGGAAATAAGGCAAAACAGGGTCGCCTTTCTTTTGGTTATTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGctc < 1:428533/250‑1 (MQ=255) aaGCAAATTCAATGGAACAAGGGAAATAAGGCAAAACAGGGTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTg > 1:511453/1‑251 (MQ=255) aGCAAATTCAATGGAACAAGGGAAATAAGGCAAAACAGGGTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTgg > 1:851808/1‑251 (MQ=255) cAATGGAACAAGCGAAATAAGGCAAAACAGGGTCGCCTTTCTTTTGGTTACTATTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGt > 1:521989/1‑251 (MQ=255) aGGGAAATAAGGCAAAACAGGGTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGc > 1:766060/1‑250 (MQ=255) aGGCAAAACAGGGTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGgcgc > 1:799817/1‑247 (MQ=255) aaaCAGGGTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCt > 1:215367/1‑222 (MQ=255) ggTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTgg < 1:261785/248‑1 (MQ=255) ttctttTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGc > 1:523910/1‑207 (MQ=255) ttttGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGt < 1:108048/251‑1 (MQ=255) ttGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTAccc > 1:33768/1‑229 (MQ=255) ttGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTAccc > 1:212401/1‑229 (MQ=255) ggCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGtt > 1:152847/1‑234 (MQ=255) gCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTc < 1:661908/250‑1 (MQ=255) aaGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACg > 1:650416/1‑250 (MQ=255) gAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGc < 1:274975/216‑1 (MQ=255) aaaaGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGgcgc < 1:856705/249‑1 (MQ=255) aaGTAACTTGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGt < 1:431529/178‑1 (MQ=255) ccTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTAccc < 1:694497/189‑1 (MQ=255) tCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCa < 1:500825/251‑1 (MQ=255) cGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATAc < 1:628271/250‑1 (MQ=255) aaaaCCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTcc < 1:544944/251‑1 (MQ=255) aaCCGAACTTGTTATACCCAATAAAATTGAACCTATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCtt < 1:80967/251‑1 (MQ=255) ttGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAg < 1:317801/128‑1 (MQ=255) ttGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGtt > 1:298223/1‑191 (MQ=255) ttGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATAtt > 1:793306/1‑231 (MQ=255) gTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGc < 1:707249/141‑1 (MQ=255) gTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTAcc > 1:107325/1‑167 (MQ=255) gTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTcc < 1:67102/239‑1 (MQ=255) gTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGgat > 1:867973/1‑251 (MQ=255) gTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGgat > 1:165884/1‑251 (MQ=255) gTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTAACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGgat > 1:833444/1‑251 (MQ=255) gTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGCTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTc > 1:236535/1‑223 (MQ=255) cAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTgg > 1:21817/1‑166 (MQ=255) cAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTc > 1:719072/1‑198 (MQ=255) cAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTa > 1:396417/1‑250 (MQ=255) cAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGCCGTAGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTa > 1:430134/1‑250 (MQ=255) aaaTTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTc < 1:728021/225‑1 (MQ=255) aaaTTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTgcgg > 1:497027/1‑233 (MQ=255) ttGAGCCAATTAAAAGCCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCCCCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCGTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATTCTCCTTTGCGGCGGATGATTTTACGTTGGAat < 1:708255/251‑1 (MQ=255) aCCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGt < 1:890358/251‑1 (MQ=255) aTTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAg < 1:690367/163‑1 (MQ=255) aTTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGt > 1:2267/1‑247 (MQ=255) caaacGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTgcgg < 1:599726/207‑1 (MQ=255) acGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCg < 1:57533/89‑1 (MQ=255) acGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTcc < 1:181775/197‑1 (MQ=255) acGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCaa > 1:77841/1‑251 (MQ=255) gAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTcc > 1:362485/1‑237 (MQ=255) aCCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGcc < 1:691946/108‑1 (MQ=255) ccAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGc < 1:658643/143‑1 (MQ=255) ccAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGAcc < 1:78224/251‑1 (MQ=255) cAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGccc < 1:301009/227‑1 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCt > 1:333553/1‑157 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTcc < 1:29872/170‑1 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCa < 1:104436/179‑1 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCAt < 1:192748/180‑1 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTcc < 1:252932/185‑1 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTgcgg > 1:345537/1‑192 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCttt > 1:417668/1‑251 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCttt > 1:837692/1‑251 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCttt > 1:332334/1‑251 (MQ=255) atatTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCttt > 1:206858/1‑251 (MQ=255) tattatGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTgc < 1:195087/189‑1 (MQ=255) attatGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCGCCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCa < 1:127279/177‑1 (MQ=255) attatGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGt > 1:6199/1‑145 (MQ=255) tCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAAt > 1:28068/1‑250 (MQ=255) cgaccctgttttgccttgtttCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTTCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAAt > 1:354279/19‑250 (MQ=255) cgaccctgttttgccttATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCa < 1:397234/155‑1 (MQ=255) cgaccctgttttgccttATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGCTTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAAt > 1:734560/16‑250 (MQ=255) cgaccctgttttgccttATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAAt > 1:61072/16‑250 (MQ=255) cgaccctgttttgccttATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAAt > 1:672962/16‑250 (MQ=255) ccccGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATcg > 1:785669/1‑251 (MQ=255) tGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGAc > 1:377582/1‑249 (MQ=255) tttttATTTCCCTTCTTCTCGCCACCATTAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCCGTTCATTCACGCTGGCGCCTATTTCCACCCTAGCATACTCGTTTGCAGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAAGTCCCAACTGTCGAACTTTTTCAAAATCGCCGCGACGTgg > 1:580874/2‑251 (MQ=255) gTTTTATTTCCCTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTgg > 1:638328/1‑251 (MQ=255) cccTTCTTCTCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTc < 1:687314/224‑1 (MQ=255) tcttctCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAg < 1:657968/251‑1 (MQ=255) tcttctCGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAg < 1:564863/251‑1 (MQ=255) tctcGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGtt > 1:388144/1‑251 (MQ=255) tcGCCACCATGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGTTc > 1:239966/1‑250 (MQ=255) caccaTGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGTTCCAtgt < 1:686190/251‑1 (MQ=255) ccaTGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGGTCCAtgttg > 1:791934/1‑251 (MQ=255) tGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGgggc < 1:624322/227‑1 (MQ=255) tGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGTTCCATGTTGttt < 1:840377/251‑1 (MQ=255) tGAGCGCGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGTTCCATGTTGttt < 1:612950/251‑1 (MQ=255) | CGAGTTTACAAAATTTCCGTGAAGCAAATTCAATGGAACAAGGGAAATAAGGCAAAACAGGGTCGCCTTTCTTTTGGTTACTTTTCTTTGGCGAAGCAAAGAAAAGTAACTCGCCTTCGGCGAAAACCGAACTTGTTATACCCAATAAAATTGAACCAATTAAAAACCACAAACAAACGTAGAACCCAATATTATGATCCCCGAACTTGGTTTTATTTCCCTTCTTCTCGCCACCATGAGCGTGTTGCTCCTCGCGGTAGTGCCGCAGCTTGGGCTTTGGTTGCGTAAGCCGGCGCTTACCCAATTGGCGTGGGGCTTAAGTTACTGCTTCGGGTTATTCACGCTGGCGCCTATTTCCATATTAGCATACTCCTTTGCGGCGGATGATTTTACGTTGGAATATGTCGCCGCCCATTCCAATTCCCAACTGCCGACCTTTTTCAAAATCGCCGCGACCTGGGGCGGGCATGAAGGTTCCATGTTGTTT > 1/216810‑217296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |