| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 212,244 | A→C | intergenic (‑31/‑274) | unknown ← / → unknown | hypothetical protein/Cytochrome c552 precursor (EC 1.7.2.2) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 212,244 | 0 | A | C | 100.0% | 14.2 / NA | 7 | intergenic (‑31/‑274) | unknown/unknown | hypothetical protein/Cytochrome c552 precursor (EC 1.7.2.2) |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (3/4); total (3/4) | |||||||||||
AAGTAAATCTTCAAGATTTATGAGTAAGAAATTAACCGCACTTTTAGAGTAGAACATCAAATCAGAAAGCCGAATTCATTTCGATGAGTTCGGTTTTTTATTGCCCGTAATTAGGGTATTTCTTCTTCGATAAAATATTCAAATAAAAATAATTCTTTTTTGTAGCATAAAATGTAAATATACCTCTTTATAGTTATATATTCCTGCTTCATTTAATTTTCCCCTTTAATGATATTTTTATAATAATAAATAGGTAGTTGACACATTTTAGGAGAAATTTTCATGCTACAAAATTTCACTAAAATAGAAAATTAAATTGGAAAAATTGATCAAAAACAAGAAAATGTAAAATAACCATGGAATGAGCGCGGATATTTGGTTATGTTAAACTCGTTTAACCCCCTTTTATACCTTAT > 1/212002‑212417 | aaGTAAATCTTCAAGATTTATGAGTAAGAAATTAACCGCACTTTTAGAGTAGAACATCAAATCAGAAAGCCGAATTCATTTCGATGAGTTCGGTTTTTTATTGCCCGTAATTAGGGTATTTCTTCTTCGATAAAATATTCAAATAAAAATAATTCTTTTTTGTAGCATAAAATGTAAATATACCTCTTTATAGTTATATATTTCTGCTTCATTTAATTTTCCCCTTTAATGATATTTTTATACTaataaat < 1:195623/251‑1 (MQ=255)aaGTAAATCTTCAAGATTTATGAGTAAGAAATTAACCGCACTTTTAGAGTAGAACATCAAATCAGAAAGCCGAATTCATTTCGATGAGTTCGGTTTTTTATTGCCCGTAATTAGGGTATTTCTTCTTCGATAAAATATTCAAATAAAAATAATTCTTTTTTGTAGCATAAAATGTAAATATACCTCTTTATAGTTATATATTTCTGCTTCATTTAATTTTCCCCTTTAATGATATTTTTATACTaataaat < 1:792396/251‑1 (MQ=255) tAATTAGGGTATTTCTTCTTCGATAAAATATTCAAATAAAAATAATTCTTTTTTGTAGCATAAAATGTAAATATACCTCTTTATAGTTATATATTTCTGCTTCATTTAATTTTCCCCTTTAATGATATTTTTATACTAATAAATAGGTAGTTGACACATTTTAGGAGAAATTTTCATGCTACAAAATTTCACTAAAATAGAAAATTAAATTGGAAAAATTGATCAAAAACAAGAAAATGTAAAATAACCAt > 1:217793/1‑251 (MQ=255) taatTCTTTTTTGTAGCATAAAATGTAAATATACCTCTTTATAGTTATATATTTCTGCTTCATTTAATTTTCCCCTTTAATGATATTTTTATACTAATAAATAGGTAGTTGACACATTTTAGGAGAAATTTTCATGCTACAAAATTTCACTAAAATAGAAAATTAAATTGGAAAAATTGATCAAAAACAAGAAAATGTAAAATAACCATGGAATGAGCGCGGATATTTGGTTATGTTAAACTCGTTTAAcc < 1:813777/251‑1 (MQ=255) gTTATATATTTCTGCTTCATTTAATTTTCCCCTTTAATGATATTTTTATACTAATAAATAGGTAGTTGACACATTTTAGGAGAAATTTTCATGCTACAAAATTTCACTAAAATAGAAAATTAAATTGGAAAAATTGATCAAAAACAAGAAAATGTAAAATAACCATGGAATGAGCGCGGATATTTGGTTATGTTAAACTCGTTTAACCCCCTTTTATACCTtat > 1:273020/1‑224 (MQ=255) ccTTTAATGATATTTTTATACTAATAAATAGGTAGTTGACACATTTTAGGAGAAATTTTCATGCTACAAAATTTCACTAAAATAGAAAATTAAATTGGAAAAATTGATCAAAAACAAGAAAATGTAAAATAACCATGGAATGAGCGCGGATATTTGGTTATGTTAAACTCGTTTAACCCCCTTTTATAc > 1:219940/1‑189 (MQ=255) tttttATACTAATAAATAGGTAGTTGACACATTTTAGGAGAAATTTTCATGCTACAAAATTTCACTAAAATAGAAAATTAAATTGGAAAAATTGATCAAAAACAAGAAAATGTAAAATAACCATGGAATGAGCGCGGATATTTgg < 1:519461/145‑1 (MQ=255) | AAGTAAATCTTCAAGATTTATGAGTAAGAAATTAACCGCACTTTTAGAGTAGAACATCAAATCAGAAAGCCGAATTCATTTCGATGAGTTCGGTTTTTTATTGCCCGTAATTAGGGTATTTCTTCTTCGATAAAATATTCAAATAAAAATAATTCTTTTTTGTAGCATAAAATGTAAATATACCTCTTTATAGTTATATATTCCTGCTTCATTTAATTTTCCCCTTTAATGATATTTTTATAATAATAAATAGGTAGTTGACACATTTTAGGAGAAATTTTCATGCTACAAAATTTCACTAAAATAGAAAATTAAATTGGAAAAATTGATCAAAAACAAGAAAATGTAAAATAACCATGGAATGAGCGCGGATATTTGGTTATGTTAAACTCGTTTAACCCCCTTTTATACCTTAT > 1/212002‑212417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |