| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,473,868 | A→G | intergenic (‑382/+73) | unknown ← / ← unknown | Transcription‑repair coupling factor/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,473,868 | 0 | A | G | 100.0% | 130.7 / NA | 58 | intergenic (‑382/+73) | unknown/unknown | Transcription‑repair coupling factor/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (34/24); total (34/24) | |||||||||||
CATTATAATTCATTGATATTTTTTTAAATATCTTGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCGTTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTGAGATTTCCCCCCCTCAGGGCTTCGCCCAGCTCCCCCGTGAACGAGGGGAACCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGTATCCCCGCTTAGTGCGTTTCTTTCTCCTCCGCCGTTTTTTCCTTCGGTTCGGGATCTTCATCAAACTTCACCACCGGTACGCAGCCTCGGCAAGTGCCTTGATCCACGCCTGCTTCTTTGCAGAAATCGGAATACGCATCCCAAGCGCGTTTTAACCAACCTTTTTTGGCT > 1/1473623‑1474103 | cATTATAATTCATTGATA‑TTTTTTAAATATCTTGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGag > 1:261645/1‑250 (MQ=14) aaTTCATTGATA‑TTTTTTAAATATCTTGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGt < 1:879846/251‑1 (MQ=14) ttCATTGATA‑TTTTTTAAATATCTTGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGttt > 1:62052/1‑251 (MQ=14) tttAAATATCTTGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTtatat > 1:252/1‑251 (MQ=14) ttGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTAc < 1:507934/251‑1 (MQ=14) ttGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTAc < 1:850765/251‑1 (MQ=14) gCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACaa > 1:485354/1‑251 (MQ=14) gCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACaa > 1:159791/1‑251 (MQ=14) gCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACaa > 1:742567/1‑251 (MQ=14) gCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACaa > 1:254037/1‑251 (MQ=14) cctccGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGttt > 1:492951/1‑251 (MQ=14) gTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGaa > 1:415945/1‑250 (MQ=14) tttACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAAc < 1:596625/250‑1 (MQ=14) tttACGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAAc < 1:711883/250‑1 (MQ=14) cGGGGGGACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTtg < 1:225292/251‑1 (MQ=14) gACAAAACGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGccc < 1:789554/250‑1 (MQ=14) aaCGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACaa < 1:565987/225‑1 (MQ=14) aCGCATTGCGTTTTGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGATTAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCACCCCCGTGAACGGGGGGAGACAAGTTTTTTCTTTTTATATCAATAGTTACATTGTTTCGAACaactgtaatacc > 1:804899/1‑235 (MQ=14) ttttGAGCATTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAg < 1:901487/251‑1 (MQ=17) ggCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAg < 1:840140/197‑1 (MQ=14) ggCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATg > 1:554798/1‑205 (MQ=14) ggCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGtttcttt > 1:159978/1‑251 (MQ=17) cccccAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGtt > 1:65322/1‑251 (MQ=17) gggTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATg > 1:9202/1‑183 (MQ=14) gTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTttcgg > 1:109165/1‑251 (MQ=18) agtaagtTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGa > 1:55448/1‑251 (MQ=18) gtTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATg > 1:97420/1‑169 (MQ=14) tGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATg < 1:394366/158‑1 (MQ=14) aTAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCaccacc < 1:837115/251‑1 (MQ=18) aCGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCAGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCgg > 1:452456/1‑250 (MQ=18) cGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGAACAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTGTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCggca < 1:424490/251‑3 (MQ=18) cccGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGc < 1:270103/250‑1 (MQ=21) aaGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGcc > 1:454825/1‑250 (MQ=21) gggCTGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGt > 1:895663/1‑140 (MQ=14) gggCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGccccg > 1:526883/1‑248 (MQ=21) ggCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCgg > 1:233468/1‑251 (MQ=21) cGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCa < 1:704721/251‑1 (MQ=21) aaGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAg < 1:737887/250‑1 (MQ=255) gggATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCgggg < 1:105131/151‑2 (MQ=255) aTCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGccc < 1:209461/139‑1 (MQ=255) aTCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGa < 1:843753/198‑1 (MQ=255) aTCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGAt < 1:762346/199‑1 (MQ=21) aTCTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCa > 1:570497/1‑250 (MQ=255) cTTGATGTTTTCACAAGATCATGCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCAcac < 1:365343/251‑3 (MQ=255) gCTTAAAAATTTAGATTTTGCCCACTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGa > 1:14479/1‑251 (MQ=255) tgcccacTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCAcac > 1:605292/7‑209 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAAc > 1:208715/2‑82 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCGCCGGCACGCAGCCCCGGCAAGTGCCTTGATc > 1:441259/2‑201 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCa < 1:329222/234‑1 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCATCCCAAGCGCGTTTTa > 1:590924/2‑251 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCATCCCAAGCGCGTTTTa > 1:494128/2‑251 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCATCCCAAGCGCGTTTTa > 1:532025/2‑251 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCATCCCAAGCGCGTTTTa > 1:692890/2‑251 (MQ=255) acTCAGGGCTTCGCCCAGCTCCCCCGGGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACaa > 1:399352/2‑72 (MQ=255) cTCAGGGCTTCGCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGc < 1:370258/178‑1 (MQ=255) gCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCATccc > 1:36691/1‑227 (MQ=255) gCCCAGCTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCATCCCAAGCGCGTTTTAACCAACCttttt > 1:212320/1‑251 (MQ=255) cTCCCCCGTGAACGGGGGGAGCCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGGATCTCCGCTTAGTGCGTTTCTTTCTTCTCCGCCGTTTTTTCTTTCGGTTCAGGATCTTCGTCGAACTTCACCACCGGCACGCAGCCCCGGCAAGTGCCTTGATCCACACCGGCTTCTTTGCAGAAATCGGAATAGGCATCCCAAGCGCGTTTTAACCAACCTTTTTTAGct < 1:764416/250‑1 (MQ=255) | CATTATAATTCATTGATATTTTTTTAAATATCTTGCCTTCCTCCGTTTACGGGGGGACAAAACGCATTGCGTTTTGAGCGTTGGCTCTGCCAACGCCCCCAAAGGGGTGAGCAAGTAAGTTTACGAACTTGCGAATAACGTGCCCGAAGGGCGGAAGGGGGGATTTATCTTGATGTTTTCACAAGATCATGCTTAAAAATTGAGATTTCCCCCCCTCAGGGCTTCGCCCAGCTCCCCCGTGAACGAGGGGAACCAAGTTTTTTCTTTTTATATAAATAGTTACAATGTTTCGAACAGTTGTGCCCCGGGTATCCCCGCTTAGTGCGTTTCTTTCTCCTCCGCCGTTTTTTCCTTCGGTTCGGGATCTTCATCAAACTTCACCACCGGTACGCAGCCTCGGCAAGTGCCTTGATCCACGCCTGCTTCTTTGCAGAAATCGGAATACGCATCCCAAGCGCGTTTTAACCAACCTTTTTTGGCT > 1/1473623‑1474103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |