| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,473,136 | G→A | T117T (ACC→ACT) | unknown ← | Transcription‑repair coupling factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,473,136 | 0 | G | A | 98.7% | 196.5 / ‑5.0 | 75 | T117T (ACC→ACT) | unknown | Transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (41/33); total (41/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.27e-01 | |||||||||||
TCATCATCAAAAAAATCTAAGCGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTTTCCAATTGTAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAGGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGTCAGTTGCGTTAATTCTTTCGCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAGACCGTCAAACTGCGCG > 1/1472909‑1473379 | tcatcatcaAAAAAATCTAAGCGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTaaaatgaaaat < 1:93556/251‑1 (MQ=255) tcaAAAAAATCTAAGCGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTg > 1:125823/1‑251 (MQ=255) aaaaaaaTCTAAGCGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGtt < 1:559771/251‑1 (MQ=255) gCGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCa > 1:765932/1‑251 (MQ=255) gCGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTCCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCa > 1:204782/1‑251 (MQ=255) cGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCaa < 1:285857/251‑1 (MQ=255) ccGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACaaa > 1:577446/1‑251 (MQ=255) tCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGGAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCa > 1:217955/1‑251 (MQ=255) ccATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAg < 1:732360/251‑1 (MQ=255) aTCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAgcg < 1:824628/251‑1 (MQ=255) aTCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAgcg < 1:865375/251‑1 (MQ=255) aaCAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCgg < 1:25659/250‑1 (MQ=255) ccAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAGGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAataata < 1:869456/251‑1 (MQ=255) caccgcgcaccgcATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAatat > 1:218237/1‑243 (MQ=255) caccgcATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTtgatg > 1:827429/1‑243 (MQ=255) cgcATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAAc < 1:44288/251‑1 (MQ=255) cATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGc < 1:532448/251‑1 (MQ=255) gTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAataata < 1:680547/218‑1 (MQ=255) gTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAgg > 1:871290/1‑251 (MQ=255) ttCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGC‑GGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGt < 1:452732/251‑1 (MQ=255) ttCCAACACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAggg > 1:424178/1‑251 (MQ=255) tCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGt < 1:34864/251‑1 (MQ=255) tCCAATACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGt > 1:234515/1‑251 (MQ=255) aTACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCt < 1:322180/171‑1 (MQ=255) tACCTGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTcc > 1:665448/1‑250 (MQ=255) tGCTCCACCGCACGATAACCCGCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCtaaactaact < 1:315661/175‑10 (MQ=255) gCTTTCTCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAataata > 1:550759/1‑186 (MQ=255) tCCAATTGCAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCaataa < 1:277842/251‑1 (MQ=255) ggCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAAc > 1:307390/1‑143 (MQ=255) agaTTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGtt > 1:465051/1‑251 (MQ=255) ttCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAAc > 1:265387/1‑179 (MQ=255) aCAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAAtt > 1:631229/1‑250 (MQ=255) aCAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTc < 1:725181/251‑1 (MQ=255) aCAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTc < 1:836198/251‑1 (MQ=255) cGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTccc < 1:18087/187‑1 (MQ=255) ccTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAAcg > 1:207399/1‑251 (MQ=255) ttattaATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAAcgca > 1:650386/1‑250 (MQ=255) attaATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAAcgcaccg > 1:473061/1‑251 (MQ=255) aaTCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAAcgcaccgcac < 1:378112/251‑1 (MQ=255) aaTCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAAcgcaccgcac < 1:85694/251‑1 (MQ=255) caacaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGCCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACtt > 1:541702/1‑250 (MQ=255) acaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGc > 1:496464/1‑158 (MQ=255) acaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGaa > 1:830520/1‑206 (MQ=255) acaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCgg > 1:348723/1‑251 (MQ=255) acaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCgg > 1:17860/1‑251 (MQ=255) acaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCgg > 1:832728/1‑251 (MQ=255) acaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCgg > 1:850166/1‑251 (MQ=255) acaaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCgg > 1:111340/1‑251 (MQ=255) caaTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCggg < 1:717776/251‑1 (MQ=255) aTACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGgtg < 1:355818/251‑1 (MQ=255) tACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGgtgt > 1:220330/1‑251 (MQ=255) aCGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGgtgt > 1:581635/1‑250 (MQ=255) aCGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGgtgt > 1:151299/1‑250 (MQ=255) aCGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGgtgt > 1:198065/1‑250 (MQ=255) tgctgcAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGt < 1:596105/251‑1 (MQ=255) gctgcAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGt > 1:633776/1‑250 (MQ=255) ctgcAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATc < 1:629631/159‑1 (MQ=255) gcAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAAcgcacc > 1:282417/1‑227 (MQ=255) gcAAATAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTcac > 1:285476/1‑250 (MQ=255) aaTAAGACGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACATTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTcaccac > 1:436793/1‑250 (MQ=255) aCGGCGGGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACgg < 1:740596/249‑1 (MQ=255) cggGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTTAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTaaac < 1:450179/251‑4 (MQ=255) cggGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTaaac < 1:470996/251‑4 (MQ=255) cggGCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTaaac < 1:661224/251‑4 (MQ=255) gggCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTaaac < 1:463466/250‑4 (MQ=255) ggCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAAcc < 1:42624/250‑1 (MQ=255) ggCAAACCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAAcc < 1:701136/250‑1 (MQ=255) aaCCCGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCaa > 1:164593/1‑251 (MQ=255) cGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCAAACTg < 1:601373/251‑1 (MQ=255) cGTTGCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCAAACTg < 1:254216/251‑1 (MQ=255) gCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCAAACTGcgcg > 1:237532/1‑251 (MQ=255) gCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCAAACTGcgcg > 1:625003/1‑251 (MQ=255) gCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCAAACTGcgcg > 1:141273/1‑251 (MQ=255) gCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCAAACTGcgcg > 1:139884/1‑251 (MQ=255) gCATTAAAGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGCCAGTTGCTTTAATTCTTTTTCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAAACCATCAAACTGcgcg > 1:96925/1‑251 (MQ=255) | TCATCATCAAAAAAATCTAAGCGAAAAGGCACCGCACTTCCCATCGGGAACAAATCCAACAACGCACCGCGCACCGCATATTCGCCATGTTCCAATACCTGCTCCACCGCACGATAACCCGCTTTTTCCAATTGTAGGCGAAGAGATTCGATGACAAAACGATCGCCTTTATTAATCAACAATACGTTATGCTGCAAATAAGACGGCGGGCAAACCCGTTGCATTAAGGTGGCGACAGGTAAAATGAAAATGCCTTGTTTGCGCTGTTGCAAATGAAACAAAGCGCTCAAGCGCGCGGAAATAATATCTTGATGAGGCGAAAAACTATCATAAGGCAGGGTTTCCCAATCGGGGAAAAAAGTCACGTTTTGCAATAATTCGGAAGGCGTCAGTTGCGTTAATTCTTTCGCCAAACGCACCGCACTTCGGGTGTCATTGGTCACCACCACGGTTAGACCGTCAAACTGCGCG > 1/1472909‑1473379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |