| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,470,824 | G→A | T888I (ACC→ATC) | unknown ← | Transcription‑repair coupling factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,470,824 | 0 | G | A | 100.0% | 200.6 / NA | 74 | T888I (ACC→ATC) | unknown | Transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (46/28); total (46/28) | |||||||||||
CTTTGTTCGTTGCCCAGCAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGGTATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAGAATTTCACGCAAAATCGC > 1/1470578‑1471068 | cTTTGTTCGTTGCCCAGCAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGatat < 1:22768/250‑1 (MQ=255) ttGTTCGTTGCCCAGCAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAg < 1:11368/251‑1 (MQ=255) ttGTTCGTTGCCCAGCAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAg < 1:234554/251‑1 (MQ=255) actgacccAGCAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTc < 1:49688/246‑1 (MQ=255) gCAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCg > 1:245047/1‑251 (MQ=255) cAATTCGCCGGCTCCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTGCCAAGGCTTCTAAACGTGTTTGCGCGTCGTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCATTCAATAATAATGATATTAGCGGTCGGCACATCGa < 1:742290/251‑1 (MQ=255) cAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGa < 1:109933/251‑1 (MQ=255) cGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGcc > 1:253166/1‑250 (MQ=255) ccacGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCaat < 1:415754/251‑1 (MQ=255) tCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGa > 1:821484/1‑251 (MQ=255) cAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAac < 1:877394/251‑1 (MQ=255) aaTCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAacac < 1:356200/251‑1 (MQ=255) ttGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAacac < 1:328914/250‑1 (MQ=255) ttGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAacac < 1:706615/250‑1 (MQ=255) aTGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAAc < 1:223276/250‑1 (MQ=255) aTGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACg < 1:136111/251‑1 (MQ=255) gcccCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGt > 1:172718/1‑243 (MQ=255) gcccCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATa > 1:541984/1‑251 (MQ=255) gcccCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATa > 1:780341/1‑251 (MQ=255) ggTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATc > 1:887028/1‑250 (MQ=255) tATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGa > 1:376169/1‑250 (MQ=255) tATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGa > 1:355633/1‑250 (MQ=255) aTCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCTCGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAacac > 1:804262/1‑222 (MQ=255) aTCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGt < 1:10684/232‑1 (MQ=255) ttCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAacac > 1:25567/1‑213 (MQ=255) ttCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCAcgcg > 1:267342/1‑249 (MQ=255) ttCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCAcgcg > 1:132849/1‑249 (MQ=255) ctgcTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTc < 1:787471/247‑1 (MQ=255) cTAAACTTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCTTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGc < 1:454048/251‑1 (MQ=255) ttGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGcc > 1:766394/1‑250 (MQ=255) ggTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAacac > 1:330523/1‑180 (MQ=255) catcaGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACgg > 1:235825/1‑251 (MQ=255) gTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGAcg > 1:419344/1‑251 (MQ=255) ttttGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGa < 1:22346/248‑1 (MQ=255) ttttGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGa < 1:15922/248‑1 (MQ=255) gcggcgGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAAC‑CCCTTCCCGCCCCACGAGCCTGGTTAAACGCCGCCAACCCGAATTTTTCGGCCCGTTAAATAATAATGATATTAGCGGCCGCCACATGGATGCCCGTTTCATAAATGTAAGAAACCCCCAACACGTTTTAACTTTGTTGTTAAAAATCGGACTTCACGCGTTCCAGCTCCCGCCCCCCCATTTGCCCGTGcccaccgggacgcgccg > 1:843904/1‑235 (MQ=255) ggcataggcTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGtt > 1:348344/1‑150 (MQ=255) ggcataggcTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGccc > 1:46587/1‑210 (MQ=255) ggcTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGttttt > 1:693035/1‑251 (MQ=255) ggcTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGttttt > 1:638282/1‑251 (MQ=255) ggcTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGttttt > 1:346374/1‑251 (MQ=255) cGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAAt > 1:543430/1‑251 (MQ=255) cGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAAt > 1:587462/1‑251 (MQ=255) cTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCaataa > 1:606516/1‑102 (MQ=255) cTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCt > 1:606637/1‑250 (MQ=255) cTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCt > 1:631796/1‑250 (MQ=255) g‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCcaca > 1:828245/1‑251 (MQ=255) cACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCg > 1:696970/1‑251 (MQ=255) aaGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTAt > 1:243784/1‑251 (MQ=255) aaGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTAt > 1:126702/1‑251 (MQ=255) aaGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTAt > 1:186483/1‑251 (MQ=255) gCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTAttt > 1:56906/1‑227 (MQ=255) tGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTtg < 1:407643/116‑1 (MQ=255) ggTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCaaa > 1:417487/1‑251 (MQ=255) ggTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCaaa > 1:77926/1‑251 (MQ=255) gtgtAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCt < 1:221861/152‑1 (MQ=255) cgcCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACAcc < 1:678018/250‑1 (MQ=255) cgcCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACAcc < 1:119701/250‑1 (MQ=255) cgcCAAGCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACAcc < 1:195757/250‑1 (MQ=255) gCCGAAATTATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAaataat > 1:713299/1‑239 (MQ=255) ttATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAg > 1:620461/1‑251 (MQ=255) ttATCGGCGCGTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTGCCGCCGTATTTTCAATGCTCGCCACATCGTTATGc < 1:897786/225‑1 (MQ=255) gTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACCCACCAACACGTTATAACGTTGATGATAAAAACCCGACATCCCGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGc < 1:510319/234‑1 (MQ=255) gTTCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAAGGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAACCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCAAAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGc < 1:95647/234‑1 (MQ=255) ttCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATacac < 1:233422/225‑1 (MQ=255) ttCAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAGAATTTCACGCa > 1:235811/1‑251 (MQ=255) cAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGtt > 1:692069/1‑174 (MQ=255) cAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTccgc < 1:561426/181‑1 (MQ=255) cAATAATAATGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATacac > 1:361261/1‑223 (MQ=255) ataataatGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATc < 1:90783/89‑1 (MQ=255) ataataatGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCAc > 1:471085/1‑137 (MQ=255) ataatGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAGAATTTCACGCAAAATCg > 1:739769/1‑250 (MQ=255) ataatGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCACTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAGAATTTCACGCAAAATCg > 1:211268/1‑250 (MQ=255) taatGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAGAATTTCACGCAAAATCGc > 1:299023/1‑250 (MQ=255) taatGATATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAGAATTTCACGCAAAATCGc > 1:243836/1‑250 (MQ=255) | CTTTGTTCGTTGCCCAGCAATTCGCCGGCACCACGGATTTCCAAATCGTGGGTTGCCAAGATGAAGCCCGCCCCGAGGTTATCCAGACTTTCCAAGGCTTCTAAACGTTTTTGCGCGTCTTTGGTCATCAGTTTTGGCGGCGGAGTGAGCAAATAGGCATAGGCTTGATGATGGGAACGCCCTACTCG‑CCCACGAAGCTGGTGTAACTGCGCCAAGCCGAAATTATCGGCGCGTTCAATAATAATGGTATTAGCGGTCGGCACATCGATGCCCGTTTCAATAATGGTAGAACACACCAACACGTTATAACGTTGATGATAAAAATCCGACATCACGCGCTCCAGCTCCCGCTCGCGCATTTGCCCGTGCCCCACGGTGACGCGCGCTTCCGGCACAAGTGCGGTCAGTTTTTCCGCCGTATTTTCAATGCTCGCCACATCGTTATGCAAATAATACACCTGCCCGCCACGCAGAATTTCACGCAAAATCGC > 1/1470578‑1471068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |