| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,445,032 | T→C | H209R (CAC→CGC) | unknown ← | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,445,032 | 0 | T | C | 100.0% | 251.9 / NA | 92 | H209R (CAC→CGC) | unknown | Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/49); total (43/49) | |||||||||||
ACGCTGTGTGCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCGCAATATTCGGCTTATTTAAACCGGCAACCAACTGCATGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGTGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCGCACAACTGATTTCAACCAGTTGCTCC > 1/1444792‑1445274 | aCGCTGTGTGCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTAc < 1:286587/249‑1 (MQ=255)aCGCTGTGTGCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACaa < 1:433771/251‑1 (MQ=255)aCGCTGTGTGCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGGCCTCATTACCTAATGCCACAATACTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACaa < 1:649858/251‑1 (MQ=255) cTGTGTGCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGt < 1:880619/251‑1 (MQ=255) gtgtgCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCTAGCTATACAATTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTCGGCGGCTGTACAAGGTAt > 1:39491/1‑251 (MQ=255) gtgtgCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGt < 1:515139/249‑1 (MQ=255) gtgtgCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTAt > 1:873382/1‑251 (MQ=255) aTCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAatc < 1:531858/251‑1 (MQ=255) cGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGt < 1:561323/229‑1 (MQ=255) gggTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGttcatt > 1:872894/1‑250 (MQ=255) gggTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGttc > 1:586364/1‑247 (MQ=255) atatTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTaa > 1:752639/1‑251 (MQ=255) ttGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAacac < 1:306696/251‑1 (MQ=255) tggCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAAt > 1:865329/1‑250 (MQ=255) atatTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAAt > 1:856519/1‑245 (MQ=255) tGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCa < 1:161302/251‑1 (MQ=255) tGCGTCGCAACACTATCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCa < 1:866870/251‑1 (MQ=255) cAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCg > 1:657468/1‑250 (MQ=255) aTACAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAAt > 1:469169/1‑219 (MQ=255) cAACTTGCCGCCGTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGt > 1:512660/1‑211 (MQ=255) ccgTCCTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTaa < 1:821462/251‑1 (MQ=255) cTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAAt > 1:309307/1‑201 (MQ=255) cTCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAAt < 1:94498/251‑1 (MQ=255) tCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAAtt < 1:674760/156‑1 (MQ=255) tCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAacac < 1:803194/188‑1 (MQ=255) tCATTACCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAAt < 1:564474/250‑1 (MQ=255) aCCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATaca > 1:834978/1‑251 (MQ=255) aCCTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATaca > 1:266/1‑251 (MQ=255) ccTAATGCCACAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGt < 1:64025/189‑1 (MQ=255) ccacAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCCCCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACTCGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAaaat < 1:440765/212‑1 (MQ=255) ccacAATATTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTa > 1:111284/4‑251 (MQ=255) atatTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGttc > 1:836539/1‑158 (MQ=255) atatTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAAt < 1:667226/232‑1 (MQ=255) atatTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATacac > 1:513228/1‑239 (MQ=255) atatTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTaa < 1:634079/247‑1 (MQ=255) atatTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATgg > 1:186154/1‑250 (MQ=255) atatTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATgg > 1:520208/1‑250 (MQ=255) atTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACaa < 1:878836/126‑1 (MQ=255) atTCGGCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGgcg > 1:63106/1‑250 (MQ=255) ggCTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAAt < 1:885290/242‑1 (MQ=255) cTTATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAg < 1:369979/251‑1 (MQ=255) tATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCGCCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTg < 1:278212/214‑1 (MQ=255) tATTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAgtg > 1:749176/1‑251 (MQ=255) aTTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAgtgg > 1:552559/1‑251 (MQ=255) aTTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAgtgg > 1:827823/1‑251 (MQ=255) aTTTAAACCGGCAACCAACTGCACGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAgtgg > 1:609658/1‑251 (MQ=255) gcatggGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAAt < 1:622552/146‑1 (MQ=255) gcatggGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAAt < 1:2350/196‑1 (MQ=255) gcatggGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATgg < 1:673842/214‑1 (MQ=255) gcatggGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTa > 1:292083/1‑251 (MQ=255) gcatggGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTa > 1:763810/1‑251 (MQ=255) gcatggGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTa > 1:748023/1‑251 (MQ=255) catggGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAAt < 1:900916/211‑1 (MQ=255) cacaATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAAt > 1:782459/1‑180 (MQ=255) cacaATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTa > 1:253041/1‑251 (MQ=255) aaTATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGc < 1:875828/251‑1 (MQ=255) aaTATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGc < 1:695893/251‑1 (MQ=255) aaTATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGc < 1:56026/251‑1 (MQ=255) atatTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCaa < 1:798210/80‑1 (MQ=255) atatTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATacac < 1:823661/183‑1 (MQ=255) atatTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCa > 1:324805/1‑251 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAAt < 1:337840/79‑1 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGttc > 1:875087/1‑100 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGc > 1:811538/1‑164 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAAt < 1:85138/174‑1 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATc > 1:647037/1‑175 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATacac > 1:390416/1‑181 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATgg > 1:540551/1‑192 (MQ=255) atTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCa > 1:628852/1‑249 (MQ=255) atatGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTtct > 1:29869/1‑250 (MQ=255) atatGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTtct > 1:451353/1‑250 (MQ=255) cACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAac < 1:70084/250‑1 (MQ=255) aCCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAacac < 1:207165/251‑1 (MQ=255) aCCCGTAAACCTTGGATAAATTGACTGCATCGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAacac < 1:412374/251‑1 (MQ=255) cccGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATg < 1:830551/106‑1 (MQ=255) cccGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCAt < 1:744356/231‑1 (MQ=255) cccGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACAcc < 1:537513/251‑1 (MQ=255) cccGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACAcc < 1:391766/251‑1 (MQ=255) cGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAAt > 1:549021/1‑160 (MQ=255) aaaCCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTc < 1:242382/251‑1 (MQ=255) aCCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCaa < 1:660615/251‑1 (MQ=255) aCCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCaa < 1:20219/251‑1 (MQ=255) gATAAATTGACTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCg > 1:56312/1‑251 (MQ=255) aCTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTTTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCaa < 1:785444/180‑1 (MQ=255) aCTGCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCaa < 1:639431/180‑1 (MQ=255) gCATTGTTGAATCACTTGTGGGCGGCTGTACAAGGAATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCGGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCGCACAACTGAttt > 1:322249/1‑251 (MQ=255) gttgAATCACTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCGCACAACTGATTTCAAc > 1:108599/1‑250 (MQ=255) aCTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACttt < 1:664048/203‑1 (MQ=255) cTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTg < 1:730145/115‑1 (MQ=255) cTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGGACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCGCACAACTGATTTCAACCAGTTGCTc > 1:424224/1‑250 (MQ=255) cTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCGCACAACTGATTTCAACCAGTTGCTcc < 1:104907/251‑1 (MQ=255) cTTGTGGGCGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCGCACAACTGATTTCAACCAGTTGCTc > 1:274110/1‑250 (MQ=255) | ACGCTGTGTGCTTTCTTCGCGATCACGATAAAACGGGTAATATTGTTTTCTTGGTTGGCGATATTGCGTCGCAACACTTTCAAGCCATACAACTTGCCGCCGTCCTCATTACCTAATGCCGCAATATTCGGCTTATTTAAACCGGCAACCAACTGCATGGCATGGGAGCTACTTTCACAATATTCAATATGCACCCGTAAACCTTGGATAAATTGACTGCATTGTTGAATCACTTGTGGGTGGCTGTACAAGGTATCAATTTTGCTCAAATCATCCTGTTCATTCACTAACACGCAATGTTGAATCGGATAGGCAAGTTCGCCCACCAAAAATAAATCGGTGTGCTGTAACAAATCATACACTTCGTTAATGGCGCCGGAAGTGGTGTTCTCCAACGGCAGAACGCCGTAATCCGCTTCGCCATTACGCACTTTCTCAAACACCTGTTCAAAACTCGCACAACTGATTTCAACCAGTTGCTCC > 1/1444792‑1445274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |