| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 196,508 | G→C | G2R (GGT→CGT) | unknown → | YpfJ protein, zinc metalloprotease superfamily |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 196,508 | 0 | G | C | 98.7% | 204.1 / ‑6.0 | 75 | G2R (GGT→CGT) | unknown | YpfJ protein, zinc metalloprotease superfamily |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (45/29); total (46/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGTCTTCGTTAATGTGTTTGGTGACGGCAGTGGAGGCCTCTTCTTCTTTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGGGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGATACTGAGG > 1/196269‑196754 | tGTCTTCGTTAATGTGTTTGGTGACGGCAGTGGAGGCCTCTTCTTCTTTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAggg < 1:330738/251‑1 (MQ=255) gTCTTCGTTAATGTGTTTGGTGACGGCAGTGGAGGCCTCTTCTTCTTTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAggg > 1:134367/1‑250 (MQ=255) ggTGACGGCAGTGGAGGCCTCTTCTTCTTTGCTGAAGATTTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTTTTTCCTTTTTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCCCTTAATCAATAGGAAGGGTTATGGGTTGGCAAGGGCGTAGGGAAAGCTCaaa > 1:862208/1‑250 (MQ=255) cGGCAGTGGAGGCCTCTTCTTCTTTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGaa < 1:861398/251‑1 (MQ=255) gCAGTGGAGGCCTCTTCTTCTTTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAaga > 1:701902/1‑251 (MQ=255) ctctTCTTCTTTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGt > 1:565611/1‑251 (MQ=255) gcttcttcttTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAag > 1:262799/2‑238 (MQ=255) cttcttcttTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTagag < 1:846127/219‑1 (MQ=255) cttcttTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAggt > 1:560923/1‑251 (MQ=255) gTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCg > 1:374743/1‑251 (MQ=255) aaTCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCggg < 1:165639/251‑1 (MQ=255) aaTAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTagag < 1:287006/172‑1 (MQ=255) ccATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATc < 1:70936/251‑1 (MQ=255) tttCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATtc > 1:285601/1‑228 (MQ=255) tttCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTg < 1:231834/251‑1 (MQ=255) ccTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCtt > 1:791665/1‑251 (MQ=255) ttATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTagag > 1:267971/1‑150 (MQ=255) ttATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCttat > 1:650858/1‑251 (MQ=255) aTTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCttatta > 1:871746/1‑251 (MQ=255) gatgaATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAG‑AGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGc < 1:629511/138‑1 (MQ=255) atgaatgaACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCATCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATgg < 1:266039/250‑1 (MQ=255) caacaTAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACg < 1:865826/138‑1 (MQ=255) caacaTAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGGTTTATCGGGATTa > 1:594492/1‑251 (MQ=255) caacaTAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCg < 1:537363/245‑1 (MQ=255) acaTAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGt > 1:825601/1‑251 (MQ=255) caTAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCATTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTc < 1:433289/251‑1 (MQ=255) cAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGGTTTATCGGGGTTAGTCGGCggg > 1:849232/1‑251 (MQ=255) aTTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGGTTTATCGGGATTAGTCGGCggggg > 1:643222/1‑250 (MQ=255) cAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATc < 1:893706/198‑1 (MQ=255) tCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGAtt > 1:550202/1‑223 (MQ=255) atatAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTAt > 1:781748/1‑174 (MQ=255) atatAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATgg < 1:494099/213‑1 (MQ=255) atatAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTgg > 1:304179/1‑251 (MQ=255) gTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTagag < 1:189484/101‑1 (MQ=255) gTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCaa > 1:830792/1‑251 (MQ=255) tCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGGTTAGTCGGCGGGGGTGATGTGGGCGCaa > 1:571653/1‑250 (MQ=255) gAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCaa > 1:711663/1‑251 (MQ=255) ataaaataGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAatta > 1:119955/1‑174 (MQ=255) ataaaataGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTc < 1:672238/221‑1 (MQ=255) tagtagGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGc > 1:272854/1‑249 (MQ=255) ggCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGt > 1:788432/1‑132 (MQ=255) ggAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTAt > 1:80343/1‑145 (MQ=255) ggAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCg > 1:491613/1‑251 (MQ=255) ggAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCg > 1:739138/1‑251 (MQ=255) ggAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCg > 1:304221/1‑251 (MQ=255) ggAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGCGGCAGACAGACGTTCGACAGGTGGTGGATTTGGCGGCGGCAGACCCACCTGTACTCTTGGGATAATTATTCTCTTAGTGGGCGCTTATTATGGCGTGGATTTTTTGGGCTTATTCAGCGGGCGTGATGTTGGCGCAACCCTAACCACACCTTTGCAATCg > 1:503735/1‑251 (MQ=255) gggTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATgg > 1:265306/1‑178 (MQ=255) gggTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAAcc < 1:248340/230‑1 (MQ=255) gggTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGcagcag > 1:338762/1‑251 (MQ=255) ggTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAg < 1:137429/161‑1 (MQ=255) ggATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTggg > 1:677419/1‑159 (MQ=255) gATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGcc < 1:673812/227‑1 (MQ=255) gATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAaga > 1:51727/1‑251 (MQ=255) ttAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGc < 1:609603/251‑1 (MQ=255) cGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGc < 1:271467/251‑1 (MQ=255) cGAAAATTTCACTTAATCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGc < 1:875064/251‑1 (MQ=255) aaTCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAagac > 1:236710/1‑59 (MQ=255) aaTCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGCGGAGGTTTTGGCGGTGGCAGACCCACCGGTAt > 1:136421/1‑106 (MQ=255) aTCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGAtg < 1:170152/179‑1 (MQ=255) aTCAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAgggggg > 1:727029/1‑245 (MQ=255) cAATAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGGTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTcc > 1:757530/1‑239 (MQ=255) aTAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAATGGTGCTggg > 1:609571/1‑251 (MQ=255) tAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGc < 1:809609/251‑1 (MQ=255) tAGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGAAGGGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAAAAAGAGCTGGCGGGGGGTTCCAAAGAGGGGCTgggg > 1:58181/1‑250 (MQ=255) aGGAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAg < 1:848800/239‑1 (MQ=255) gAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATc > 1:314417/1‑116 (MQ=255) gAAGGGTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGAt > 1:171478/1‑251 (MQ=255) gggTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTCTTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCCGCAGGAACAAGAGCTGGCGGGGGCTTCCAAAGTGGGGCTCGGCgttc > 1:265365/1‑246 (MQ=255) ggTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCttatt > 1:197381/1‑128 (MQ=255) ggTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCt > 1:581255/1‑225 (MQ=255) ggTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGATAc < 1:137607/249‑1 (MQ=255) ggTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGATAc < 1:324410/249‑1 (MQ=255) gTTATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGATACTGa > 1:822501/1‑251 (MQ=255) tATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGATACTGAgg < 1:83287/251‑1 (MQ=255) tATGCGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGATACTGAgg < 1:472415/251‑1 (MQ=255) | TGTCTTCGTTAATGTGTTTGGTGACGGCAGTGGAGGCCTCTTCTTCTTTGCTGAAGA‑TTTTTTTACCGATGTCACCGATAAAATCAAATAAACCCATTTTTTCTCTCCTTATTGATGAATGAACGGAAGTCACAACATAACCAATTCAATCATATAAGTCTAGAAATAAAATAGTAGGCGGGAAAAGGGTTATGGATTAGAATGACGAAAATTTCACTTAATCAATAGGAAGGGTTATGGGTTGGCAAGGGCGTAGAGAAAGCTCAAACGTGGAAGACAGACGTTCGTCAGGTGGTGGTTTTGGCGGTGGCAGACCCACCGGTATTCTCGGGTTAATTATTATCTTAGTGGGCGCTTATTATGGCGTGGATTTATCGGGATTAGTCGGCGGGGTTGATGTGGGCGCAACCCAAACCACGCCTTTGCAATCGCAGCAGGAACAAGAGCTGGCGGGGCTTTCCAAAGTGGTGCTGGGCGATACTGAGG > 1/196269‑196754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |