Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,440,803 C→T *378* (TAG→TAA)  unknown ← N‑succinyl‑L,L‑diaminopimelate desuccinylase (EC 3.5.1.18)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,440,8030CT100.0% 190.7 / NA 70*378* (TAG→TAA) unknownN‑succinyl‑L,L‑diaminopimelate desuccinylase (EC 3.5.1.18)
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (42/28);  total (42/28)

CCTGCGTCATCATGCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTCTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCAACGCACTCACCAGTTT  >  1/1440557‑1441039
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            
ccTGCGTCATCATGCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGTTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAAt                                                                                                                                                                                                                                          <  1:456056/251‑1 (MQ=255)
ccTGCGTCATCATGCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAAt                                                                                                                                                                                                                                          <  1:716023/251‑1 (MQ=255)
 cTGCGTCATCATGCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATg                                                                                                                                                                                                                                         <  1:484588/251‑1 (MQ=255)
   gCGTCATCATGCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAAt                                                                                                                                                                                                                                          >  1:253674/1‑248 (MQ=255)
            tGCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAAt                                                                                                                                                                                                                              <  1:107803/251‑1 (MQ=255)
             gCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAAt                                                                                                                                                                                                                                          <  1:3270/238‑1 (MQ=255)
              cACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGGTAAGCTCATTTTAATGTTCCAATAAAtt                                                                                                                                                                                                                             >  1:86381/1‑250 (MQ=255)
                cTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCa                                                                                                                                                                                                                           >  1:76367/1‑250 (MQ=255)
                cTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCa                                                                                                                                                                                                                           >  1:164103/1‑250 (MQ=255)
                cTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCa                                                                                                                                                                                                                           >  1:874809/1‑250 (MQ=255)
                cTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCCGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCa                                                                                                                                                                                                                           >  1:890722/1‑250 (MQ=255)
                       ttCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACAt                                                                                                                                                                                                                    <  1:588755/250‑1 (MQ=255)
                           gCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGAt                                                                                                                                                                                                               >  1:126221/1‑251 (MQ=255)
                            cGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATg                                                                                                                                                                                                              <  1:753696/251‑1 (MQ=255)
                                aaaTTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTaa                                                                                                                                                                                                          >  1:681775/1‑251 (MQ=255)
                                   tttGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATc                                                                                                                                                                                                       <  1:59751/251‑1 (MQ=255)
                                     tGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTg                                                                                                                                                                                                     <  1:412429/251‑1 (MQ=255)
                                       ccATTCCAAATCAGCTGCTGACGCGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGAc                                                                                                                                                                                                   <  1:103379/251‑1 (MQ=255)
                                         aTTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCg                                                                                                                                                                                                 <  1:761492/251‑1 (MQ=255)
                                          ttCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAGGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATc                                                                                                                                                                                                       <  1:76371/244‑1 (MQ=255)
                                                 tCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGcc                                                                                                                                                                                         <  1:794273/251‑1 (MQ=255)
                                                       gctgACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGAt                                                                                                                                                                                    >  1:807707/1‑250 (MQ=255)
                                                          gACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACCAAATGTTCATGCCATTTGCCACAAAGCATTTCAGGGGTTAAGCTCCCTTTAATGTTTCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCtt                                                                                                                                                                                 >  1:42398/1‑250 (MQ=255)
                                                                           aaaCTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGt                                                                                                                                                               >  1:228542/1‑251 (MQ=255)
                                                                                gCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTTCCACAAAGCATTTCAGGGGGTAAGCTCATTTTAATTTTCCAATAAATTCACTAACCTTTGATGGTAAATCTGACCGCCTTTGCCAAGATCTTCCACGCTCACGCACTCGTTTa                                                                                                                                                            >  1:687183/1‑249 (MQ=255)
                                                                                 cTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTTATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACtt                                                                                                                                                         >  1:803582/1‑251 (MQ=255)
                                                                                      cGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGa                                                                                                                                                    <  1:789953/251‑1 (MQ=255)
                                                                                               aTTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATc                                                                                                                                                                                                       >  1:605918/1‑191 (MQ=255)
                                                                                                      ccATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGc                                                                                                                                     <  1:565772/250‑1 (MQ=255)
                                                                                                        aTTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCCCACGCACTCGTTTACTTTATGa                                                                                                                                                    >  1:720051/1‑233 (MQ=255)
                                                                                                               aCCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAAtt                                                                                                                           <  1:300137/251‑1 (MQ=255)
                                                                                                                   cACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAAt                                                                                                                            >  1:219424/1‑246 (MQ=255)
                                                                                                                     cTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTccacca                                                                                                                     >  1:539361/1‑251 (MQ=255)
                                                                                                                              aaGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCATGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCgcgc                                                                                                            <  1:446267/251‑1 (MQ=255)
                                                                                                                                   ttGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATg                                                                                                       <  1:499723/251‑1 (MQ=255)
                                                                                                                                          gCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGc                                                                                                  <  1:615308/249‑1 (MQ=255)
                                                                                                                                                   gcctgcGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATGAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAAcgt                                                                                        >  1:840666/1‑250 (MQ=255)
                                                                                                                                                        cgcCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATaaaa                                                                                           <  1:811625/242‑1 (MQ=255)
                                                                                                                                                          ccTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGa                                                                                >  1:572206/1‑251 (MQ=255)
                                                                                                                                                             gTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAAt                                                                                                                                                                                                                              <  1:536488/106‑1 (MQ=255)
                                                                                                                                                             gTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAggg                                                                             >  1:797209/1‑250 (MQ=255)
                                                                                                                                                              tAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAAtg                                                                                                                                                 >  1:347747/1‑182 (MQ=255)
                                                                                                                                                                   aaTGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGCTGccacc                                                                       <  1:97272/251‑1 (MQ=255)
                                                                                                                                                                        ttGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCgg                                                                  <  1:510409/251‑1 (MQ=255)
                                                                                                                                                                           ggTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCAc                                                                                                                                                                             <  1:526044/141‑1 (MQ=255)
                                                                                                                                                                            gTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACt                                                                                                                                                                  >  1:872138/1‑151 (MQ=255)
                                                                                                                                                                                   gggTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGc                                                                                                                                     >  1:131760/1‑173 (MQ=255)
                                                                                                                                                                                   gggTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATg                                                                                                       >  1:191394/1‑203 (MQ=255)
                                                                                                                                                                                    ggTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTTAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTTCCAAGATCTTTCACGCTCACGCACTCGTTTATTTTATGGATGGTGGCGTTAAGCGGTTCGAATTCCACCACTTTCGCGCCCCTGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCg                                                      >  1:737776/1‑251 (MQ=255)
                                                                                                                                                                                              ggTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCAc                                                                                                                                                                   >  1:553040/1‑132 (MQ=255)
                                                                                                                                                                                               gTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCa                                                                                                                                                                              >  1:287297/1‑120 (MQ=255)
                                                                                                                                                                                                    cTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACtt                                                                                                                                                         >  1:479059/1‑136 (MQ=255)
                                                                                                                                                                                                    cTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGAt                                      >  1:512432/1‑251 (MQ=255)
                                                                                                                                                                                                         tGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACATCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATttgtt                                 >  1:387924/1‑251 (MQ=255)
                                                                                                                                                                                                               cgcgATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAgg                            >  1:433706/1‑250 (MQ=255)
                                                                                                                                                                                                               cgcgATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGc                           <  1:176950/251‑1 (MQ=255)
                                                                                                                                                                                                                   aTTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTc                                                                                                                 >  1:38715/1‑161 (MQ=255)
                                                                                                                                                                                                                        ccACAAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTccacca                  >  1:228053/1‑251 (MQ=255)
                                                                                                                                                                                                                         cacaAAGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCaa                 <  1:490569/251‑1 (MQ=255)
                                                                                                                                                                                                                             aaGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTccac                    >  1:176589/1‑244 (MQ=255)
                                                                                                                                                                                                                             aaGCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCaa                 <  1:14029/247‑1 (MQ=255)
                                                                                                                                                                                                                               gCATTTCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCAACGCa             >  1:382305/1‑249 (MQ=255)
                                                                                                                                                                                                                                  tttCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAAt                                                          <  1:752595/201‑1 (MQ=255)
                                                                                                                                                                                                                                  tttCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCAACGCACTCa         >  1:605438/1‑250 (MQ=255)
                                                                                                                                                                                                                                  tttCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCAACGCACTCa         >  1:402302/1‑250 (MQ=255)
                                                                                                                                                                                                                                  tttCAGGGGTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCAACGCACTCa         >  1:607355/1‑250 (MQ=255)
                                                                                                                                                                                                                                        gggTTAAGCTCATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCAACGCACTCACCAGttt  >  1:652352/1‑251 (MQ=255)
                                                                                                                                                                                                                                                  cATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATaaa                                                                                            >  1:682722/1‑151 (MQ=255)
                                                                                                                                                                                                                                                  cATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATaa                                                                                             >  1:362368/1‑150 (MQ=255)
                                                                                                                                                                                                                                                  cATTTTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGcc                                            >  1:525705/1‑199 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            
CCTGCGTCATCATGCACTTTACGTTCAGCGTTAAATTTGCCATTCCAAATCAGCTGCTGACGTGCAAAATCACGAAAACTGCTCGCCGGCTGTAAATTAAAGCCATTTTTTACCGCACTTTTTTGTAAGCCTTGAAAGGCTTTCGCTGCCTGCGCCTGTAAGAAATGATTGGGTGAATGGGGTATCGGCAGGTTTACTAAATGTTCACGCGATTTGCCACAAAGCATTTCAGGGGTTAAGCTCATTCTAATGTTCCAATAAATTCACTAACATTTGATGGTAAATCTGACCGCATTTGCCAAGATCTTCCACGCTCACGCACTCGTTTACTTTATGAATGGTGGCGTTAAGCGGTCCGAATTCCACCACTTCCGCGCCCATGAGGGCAATAAAACGTCCGTCTGAGGTGCCACCACCGGTTTCCAATTTCGGCGTAATGCCTGCGATTTGTTGCAGGCTGTCCACCAACGCACTCACCAGTTT  >  1/1440557‑1441039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑