| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,420,584 | A→G | intergenic (‑51/+34) | unknown ← / ← unknown | Recombination protein RecR/Nucleoid‑associated protein YaaK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,420,584 | 0 | A | G | 100.0% | 207.6 / NA | 72 | intergenic (‑51/+34) | unknown/unknown | Recombination protein RecR/Nucleoid‑associated protein YaaK |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (29/43); total (29/43) | |||||||||||
CCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGCAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATAAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGATTTTCACTAAGCC > 1/1420341‑1420830 | ccGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGaaaa > 1:708875/1‑251 (MQ=255) tAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAg < 1:308542/250‑1 (MQ=255) tAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAg < 1:776279/250‑1 (MQ=255) ggCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGtt > 1:343409/1‑251 (MQ=255) aTTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACTGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAACGGGCTGGTTTGCTTAAGGCTCCCGATGGGTTTGCTGAAAAAATAAACCCCACTTTCCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTaaaa > 1:218140/1‑251 (MQ=255) tCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTg < 1:104655/251‑1 (MQ=255) cGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGa < 1:152332/251‑1 (MQ=255) gcgcCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGa > 1:324016/1‑250 (MQ=255) cgcCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGGTGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGAc < 1:572162/250‑1 (MQ=255) cgcCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGAc < 1:750276/250‑1 (MQ=255) ccAAGCGCATTACGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACAt < 1:121912/250‑1 (MQ=255) gcgcATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACcgg > 1:284314/1‑251 (MQ=255) ccgccgCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGtgac < 1:167537/251‑1 (MQ=255) gCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGAc > 1:94641/1‑218 (MQ=255) gCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATAc > 1:343675/1‑222 (MQ=255) gCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCtttt > 1:211034/1‑251 (MQ=255) gCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCtttt > 1:585261/1‑251 (MQ=255) aaaTGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACcggcgg < 1:32637/223‑1 (MQ=255) aTGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTaa > 1:226213/1‑249 (MQ=255) tGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATAcc < 1:227300/215‑1 (MQ=255) aCGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAAc < 1:453824/179‑1 (MQ=255) aCGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAAc < 1:305727/245‑1 (MQ=255) gCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCCTTTTTTTTTTTTGTAACTCTTCgg > 1:641553/1‑250 (MQ=255) gCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCgg > 1:761934/1‑250 (MQ=255) ccATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGGCCGGCGCCCTTTTTTTTTTTTGTAACTCTTCggga > 1:57172/1‑249 (MQ=255) tGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCAc < 1:663593/251‑1 (MQ=255) cgGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGc < 1:660971/250‑1 (MQ=255) gATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAAc < 1:312934/162‑1 (MQ=255) gATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGa < 1:46033/172‑1 (MQ=255) gATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTTTAACTCTTCGGCACGACGCACTGCAt > 1:260896/1‑250 (MQ=255) gATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCAt < 1:564953/250‑1 (MQ=255) gATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCAt < 1:869395/250‑1 (MQ=255) gATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCAt < 1:823582/250‑1 (MQ=255) gACCGACGCCCGGTAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGc < 1:578501/202‑1 (MQ=255) gccggccccccgttaatcgggTAAACTTTCGGATAGGATTTCCT‑ACAAGGGGCTTGGTTGCCAAAGGTTCCCGAAGGAATTTCTGAAAAAAAAAACCCCCCTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAAt < 1:769152/230‑1 (MQ=255) gCCCGGTAATACGCGTAAAC‑TTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGt < 1:263286/238‑1 (MQ=255) gtaaTACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGtgac > 1:614457/3‑184 (MQ=255) cgcgTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGt > 1:730658/1‑249 (MQ=255) gTAAACTTTC‑GATCAGATTCTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGa < 1:444687/160‑1 (MQ=255) cTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGAc > 1:261992/1‑156 (MQ=255) cTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTa < 1:618199/222‑1 (MQ=255) gATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTTTAACCCTTTGGCACGACGCACCGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCg > 1:229051/1‑251 (MQ=255) aTTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTAt < 1:832028/248‑1 (MQ=255) aTTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTAt < 1:45331/248‑1 (MQ=255) aTTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGt < 1:494191/251‑1 (MQ=255) aTTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGt < 1:371173/251‑1 (MQ=255) ttCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTcc < 1:893986/232‑1 (MQ=255) aaCAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGATTGAGGCCCTTTTTTCTTTTTGTAACTCTTCGGCACGACCCACTGCATCGTTTAATGCCCCGGCGATTTAGTTTTTCCACATCTCTTTATTGTCTTTCAt > 1:790816/1‑251 (MQ=255) aaCAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCAt < 1:36255/251‑1 (MQ=255) aCAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCAtt < 1:157918/251‑1 (MQ=255) aCAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCAtt < 1:88880/251‑1 (MQ=255) gggCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTTTTTTTGTAACTCTTCGGGACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGGCTTCCAACATCTCTTTATCGTCTTCCATTAaaga > 1:871528/1‑251 (MQ=255) gggCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCac > 1:185064/1‑181 (MQ=255) gggCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAaag < 1:734853/250‑1 (MQ=255) gggCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAaag < 1:403625/250‑1 (MQ=255) gCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTTTTTTTTTAACTCTTCGGCACGACGCACTGCATCGt > 1:308936/1‑186 (MQ=255) gCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTTTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTTTTGTCTTCCATTAAAGAAGGATCGAtt > 1:484595/1‑251 (MQ=255) cATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGAtt < 1:348266/250‑1 (MQ=255) aGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGAATGACGCCATTTTTTCTTTTTGTAACTCTTCGGc > 1:418580/1‑164 (MQ=255) ggTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGAc < 1:102759/116‑1 (MQ=255) gTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTac < 1:599161/249‑1 (MQ=255) ttCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTGAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTacac < 1:320130/250‑1 (MQ=255) ttCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTacac < 1:418804/250‑1 (MQ=255) cTGAAAAAATAAACCCCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGgc < 1:691667/251‑1 (MQ=255) gAAAAAATAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGgcg > 1:236132/1‑250 (MQ=255) aaTAAACCGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTg < 1:253750/251‑1 (MQ=255) ccGCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTCTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTg > 1:476661/1‑251 (MQ=255) gCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCCCTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGAt > 1:192502/1‑251 (MQ=255) gCACTTTGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCCACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGAt > 1:627666/1‑251 (MQ=255) tttGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGATTTTc < 1:808822/251‑1 (MQ=255) tGCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGATTTTCAc < 1:232866/251‑1 (MQ=255) gCCGTTAATGAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGATTTTCa > 1:534145/1‑249 (MQ=255) taatgaAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGATTTTCACTAAGcc < 1:99241/251‑1 (MQ=255) | CCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGCAATACGCGTAAACTTTC‑GATCAGATTTTCTAACAAGGGGCTGGTTTGCATAAGGTTCCCGATGGATTTGCTGAAAAAATAAACCGCACTTTGCCGTTAATAAAGAAAAAGTGCGGTCGTTTTTTAGGACGTTTTTTAAAACGGCATTTTGAAGCCCGGCGGTAAAGACATACCGGCGGTGACTGACGCCATTTTTTCTTTTTGTAACTCTTCGGCACGACGCACTGCATCGTTAAATGCCGCGGCGATTAAGTCTTCCAACATCTCTTTATCGTCTTCCATTAAAGAAGGATCGATTTCTACACGACGGCAGTTGTGGGCGCCGTTGATGGTGATTTTCACTAAGCC > 1/1420341‑1420830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |