| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,420,271 | G→A | T88M (ACG→ATG) | unknown ← | Recombination protein RecR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,420,271 | 0 | G | A | 100.0% | 233.2 / NA | 82 | T88M (ACG→ATG) | unknown | Recombination protein RecR |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (34/48); total (34/48) | |||||||||||
ACTTTGACGTTTTGTTGCAGGCAAAGCTCCGCAATGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCGTTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGCAATACGCGTAAACTTTCGATCAGATTTTCTA > 1/1420031‑1420514 | ccTTTGACGTTTTGTTGCAGGCAAAGCTCCGCAATGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGGAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCcaccac < 1:416892/250‑1 (MQ=255) cTTTGACGTTTTGTTGCAGGCAAAGCTCCGCAATGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGCGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACg > 1:71251/1‑251 (MQ=255) tttGACGTTTTGTTGCAGGCAAAGCTCCGCAATGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGc < 1:252011/251‑1 (MQ=255) gCAAAGCTCCGCAAGGTAGTTTGCTTTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAGCAATTCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAAtt < 1:17476/249‑1 (MQ=255) aaGCTCCGCAATGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTgg > 1:685806/1‑250 (MQ=255) gCAATGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTgg > 1:176084/1‑251 (MQ=255) aTGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAGGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGAtt > 1:250940/1‑251 (MQ=255) gTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTa > 1:590204/1‑250 (MQ=255) tgtgGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGt < 1:751088/251‑1 (MQ=255) gCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTccac < 1:597283/195‑1 (MQ=255) gCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGt > 1:881608/1‑251 (MQ=255) ccTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGt > 1:261818/1‑250 (MQ=255) aCCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCttcttc < 1:562582/251‑1 (MQ=255) aCCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCttcttc < 1:520314/251‑1 (MQ=255) ccGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCttcttc > 1:26955/1‑250 (MQ=255) gggTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCTCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTaaa > 1:27787/1‑251 (MQ=255) ggCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCgg > 1:499374/1‑250 (MQ=255) cTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCaa < 1:604240/251‑1 (MQ=255) cTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCaa < 1:833505/251‑1 (MQ=255) aaaGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGAt < 1:51472/251‑1 (MQ=255) aTTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGAttt < 1:558725/249‑1 (MQ=255) ccGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGAc < 1:692957/251‑1 (MQ=255) gTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCttcttc > 1:459815/1‑209 (MQ=255) gTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTGCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTaa < 1:392254/214‑1 (MQ=255) ttttGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCttcttc < 1:232565/197‑1 (MQ=255) caacaaATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGACAACCGCCCTGTTCGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTCCCGCAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCtt > 1:284656/1‑251 (MQ=255) caacaaATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCtt > 1:685429/1‑251 (MQ=255) aaGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAgcg < 1:159584/251‑1 (MQ=255) aTTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTc > 1:11567/1‑250 (MQ=255) tCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTccgcc < 1:112947/251‑1 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGcc < 1:374465/118‑1 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATg > 1:62931/1‑149 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGt < 1:487439/150‑1 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGcaca > 1:630807/1‑156 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGtc < 1:655451/160‑1 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAg > 1:241935/1‑174 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTc < 1:781910/187‑1 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGccc < 1:901474/223‑1 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCTAAGCGCATTCCGCTGCTGCg > 1:798413/1‑250 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGa > 1:751613/1‑251 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGa > 1:259865/1‑251 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGa > 1:528442/1‑251 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGa > 1:83167/1‑251 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGa > 1:592048/1‑251 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGa > 1:194942/1‑251 (MQ=255) ggCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGa > 1:19496/1‑251 (MQ=255) cGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTg < 1:218348/251‑1 (MQ=255) tCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCaa < 1:460806/251‑1 (MQ=255) tCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCaa < 1:461859/251‑1 (MQ=255) cggcgACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAAt < 1:489044/251‑1 (MQ=255) cggcgACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAAt < 1:697539/251‑1 (MQ=255) aCAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATAc < 1:69760/251‑1 (MQ=255) aCAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATAc < 1:640783/251‑1 (MQ=255) cAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACg > 1:184686/1‑251 (MQ=255) aaaTGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGc < 1:572571/251‑1 (MQ=255) aaaTGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGc < 1:77958/251‑1 (MQ=255) aaTGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGcc < 1:619772/251‑1 (MQ=255) tGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGcc < 1:58960/92‑1 (MQ=255) tGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCAt > 1:16089/1‑251 (MQ=255) ccccATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATa > 1:861129/1‑250 (MQ=255) cccATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACg < 1:531750/251‑1 (MQ=255) ccATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGt < 1:494905/251‑1 (MQ=255) ccATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGt < 1:258866/251‑1 (MQ=255) ccATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGt < 1:867332/251‑1 (MQ=255) cAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATAc > 1:550098/1‑245 (MQ=255) cACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCgg < 1:458972/251‑1 (MQ=255) cGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTgcgc > 1:876050/1‑190 (MQ=255) aCGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGAc < 1:267481/251‑1 (MQ=255) aCTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCggt > 1:1592/1‑250 (MQ=255) cTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTgcgc > 1:655903/1‑171 (MQ=255) cTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATAcg < 1:856655/251‑1 (MQ=255) cTGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGAGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATAcg < 1:191895/251‑1 (MQ=255) tGTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATAcgc < 1:536647/251‑1 (MQ=255) gTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTg < 1:263352/189‑1 (MQ=255) gTTTGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGt > 1:653416/1‑216 (MQ=255) tttGCTCGATAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATAcgcg < 1:756339/250‑1 (MQ=255) tAGCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAg > 1:364060/1‑99 (MQ=255) gCAAGAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAAGAAATGATACGCCATACGt < 1:281433/204‑1 (MQ=255) gAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATAc < 1:201127/198‑1 (MQ=255) gAATATCCGCCGGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGt < 1:755400/200‑1 (MQ=255) cgccgGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTCGATCAGATTTTCTa < 1:247903/251‑1 (MQ=255) cgccgGCATTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGTAATACGCGTAAACTTTCGATCAGATTTTCTa < 1:402692/251‑1 (MQ=255) | ACTTTGACGTTTTGTTGCAGGCAAAGCTCCGCAATGTAGTTTGCTGTGGCGTCGCCTTCTACCGTCGGGTTAGTGGCTAAAATCACTTCATTGAAAGATTCCGTTTGCAGGCGTTTTTGCAACAAATCCAAGCCAATTTCGCACGGGCCGATACCGTCCAGCGGCGACAAATGCCCCATCAGCACGAAATAACGCCCGGAAAACTGCCCTGTTTGCTCGATAGCAAGAATATCCGCCGGCGTTTCCACCACGCAAAGCAAGCCCGAATTTTGGCGGCGTGGATTACTGCAAATGTTGCACACGTCTTCTTCCGTAAAAGTGCGGCAATGTTCGCAATGCCCGATTTTCGACATCGCTTCCGTCAGCCCTTGCGCCAAGCGCATTCCGCCGCTGCGATTGCGTTGCAATAAATGATACGCCATACGTTGCGCGGATTTCGGACCGACGCCCGGCAATACGCGTAAACTTTCGATCAGATTTTCTA > 1/1420031‑1420514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |