| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 187,296 | A→G | R20R (CGT→CGC) | unknown ← | 2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylic‑acid synthase (EC 2.2.1.9) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 187,296 | 0 | A | G | 100.0% | 221.4 / NA | 80 | R20R (CGT→CGC) | unknown | 2‑succinyl‑5‑enolpyruvyl‑6‑hydroxy‑3‑ cyclohexene‑1‑carboxylic‑acid synthase (EC 2.2.1.9) |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (30/50); total (30/50) | |||||||||||
GTTTACATGGCTTTGGCGCGCTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGACGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACGCAAAATTCGGCTCGCCC > 1/187050‑187540 | gTTTACATGGCTTTGGCGCGCTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGATGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGgcgc < 1:430987/250‑1 (MQ=255) aCATGGCTTTGGCGCGCTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAg < 1:361636/251‑1 (MQ=255) aTGGCTTTGGCGCGCTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAggg < 1:828651/251‑1 (MQ=255) gCTTTGGCGCGCTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGgcgc < 1:377373/241‑1 (MQ=255) gCTTTGGCGCGCTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGttt > 1:18909/1‑251 (MQ=255) cTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCAc < 1:656121/250‑1 (MQ=255) cTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCAc < 1:669154/250‑1 (MQ=255) gatgatCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCg > 1:495400/1‑251 (MQ=255) tgatCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGAc < 1:34133/251‑1 (MQ=255) atCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGAcc < 1:37768/250‑1 (MQ=255) cGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACcaac < 1:780769/251‑1 (MQ=255) ccGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACcaacaa < 1:322633/251‑1 (MQ=255) tataAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGAtt < 1:754123/251‑1 (MQ=255) aaTTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCTCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAAt < 1:439193/251‑1 (MQ=255) aaTTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAAt > 1:713651/1‑251 (MQ=255) aTTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATa < 1:833137/251‑1 (MQ=255) aTTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATa < 1:357776/251‑1 (MQ=255) aTTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATa < 1:474577/251‑1 (MQ=255) tGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGc > 1:672985/1‑240 (MQ=255) ccGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACAttt < 1:169388/250‑1 (MQ=255) ggAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACAtttttt > 1:513573/1‑251 (MQ=255) aGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTtc < 1:520748/250‑1 (MQ=255) gACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTtctctc > 1:144683/1‑250 (MQ=255) cAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAggg > 1:562459/1‑189 (MQ=255) cAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGAcc < 1:741651/210‑1 (MQ=255) cGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAg < 1:105873/251‑1 (MQ=255) cGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAg < 1:282074/251‑1 (MQ=255) cGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAg < 1:824899/251‑1 (MQ=255) ggTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGtt > 1:744752/1‑251 (MQ=255) ggTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGtt > 1:683451/1‑251 (MQ=255) ttttGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTAttt < 1:358300/251‑1 (MQ=255) ttttGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGAGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTAttt < 1:661096/251‑1 (MQ=255) ttGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGt < 1:742084/251‑1 (MQ=255) gtggCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTaa < 1:537204/250‑1 (MQ=255) tggCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAAc < 1:168510/250‑1 (MQ=255) tggCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAAc < 1:302573/250‑1 (MQ=255) gCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCAc < 1:152556/176‑1 (MQ=255) cacCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAAt > 1:752395/1‑188 (MQ=255) aaTCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGt < 1:773889/251‑1 (MQ=255) aTCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTg > 1:383567/1‑183 (MQ=255) cccAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAg > 1:711126/1‑134 (MQ=255) cAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGAt < 1:461545/251‑1 (MQ=255) gtcgAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTcc < 1:745627/127‑1 (MQ=255) gtcgAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGAt < 1:751256/239‑1 (MQ=255) tGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAg > 1:88823/1‑251 (MQ=255) gCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATAc > 1:530797/1‑151 (MQ=255) gtgGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGaa > 1:326170/1‑250 (MQ=255) tgGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAAc < 1:334851/250‑1 (MQ=255) gCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGTAAGGGAACAg < 1:773225/250‑1 (MQ=255) cAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGAc < 1:414580/251‑1 (MQ=255) gggCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCtt > 1:10671/1‑251 (MQ=255) cgGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTcaac < 1:118779/250‑1 (MQ=255) cgGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTcaac < 1:633705/250‑1 (MQ=255) tGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATac < 1:291352/251‑1 (MQ=255) tGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATac < 1:801255/251‑1 (MQ=255) gCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATacc < 1:504339/250‑1 (MQ=255) gTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAAt < 1:67455/119‑1 (MQ=255) gTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCa < 1:48253/218‑1 (MQ=255) gTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTcaac < 1:436273/237‑1 (MQ=255) gacggCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAAc > 1:338827/1‑175 (MQ=255) gacggCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATac < 1:476028/235‑1 (MQ=255) ggCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAAcc > 1:170285/1‑173 (MQ=255) cTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGc > 1:901756/1‑111 (MQ=255) aTGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGAcc > 1:591388/1‑212 (MQ=255) tGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAAc > 1:627168/1‑163 (MQ=255) tCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATaa < 1:297213/251‑1 (MQ=255) aaCGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAgg > 1:280400/1‑251 (MQ=255) aaCCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGa < 1:85185/184‑1 (MQ=255) aaCCGGGCGCGATACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTcaac > 1:383808/1‑198 (MQ=255) aTACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGAc < 1:323764/81‑1 (MQ=255) aTACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATaccggcac < 1:555042/198‑1 (MQ=255) aTACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATac > 1:18280/1‑192 (MQ=255) aTACAAAAGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACg > 1:167417/1‑251 (MQ=255) aaaGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAgg < 1:192260/229‑1 (MQ=255) aaGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCGCTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACGCAAAAt < 1:351343/251‑1 (MQ=255) aGTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAAc < 1:770856/112‑1 (MQ=255) gTGGGACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACGCAAAAtt > 1:153963/1‑250 (MQ=255) ggACACGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAAcg < 1:319701/198‑1 (MQ=255) cGCCTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACGCAAAATTCGGCTCGc > 1:192995/1‑250 (MQ=255) ccTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCa > 1:404935/1‑150 (MQ=255) ccTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACGCAAAATTCGGCTCGccc > 1:842802/1‑250 (MQ=255) ccTTGGCGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACGCAAAATTCGGCTCGccc > 1:501493/1‑250 (MQ=255) | GTTTACATGGCTTTGGCGCGCTTCGATGATCGCCGGGTATAAATTCGCACCAGCCGTGCCGGAGGTGACAATAACGGCGACGGGTTTTTTGGTGGCTTTCGCCACACCAAGAGCAAAAAATCCCAAGCCGCGTTCGTCGAAGTGCGTGTGGCAAAGGGCGCGGTTGGCGTTTTGTAAACGGACGGCTTCCAATGTCAGCGGGGTCGAACGCGAACCGGGCGCGATACAAAAGTGGGACACGCCTTGACGCACAAGGGTTTCCAAGATCACTTTCGACCAACAACGATTAAATACGCTTACTGACATTTTTTCTCTCCGTTTTTAGATTCCGTTATTTGTAACAATGAGATTAAACCGGCGGCTTTACGTTCGATTTCCTGCCATTCTAGCAAGGGAACAGACCCTTCAACAATACCGGCACCGGCAAAAACGCGAATTTTGTCCGCTTCAATAAAGGCGGAACGAATGGTTACGCAAAATTCGGCTCGCCC > 1/187050‑187540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |