| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,379,935 | A→G | V98A (GTC→GCC) | unknown ← | Magnesium and cobalt efflux protein CorC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,379,935 | 0 | A | G | 100.0% | 233.1 / NA | 83 | V98A (GTC→GCC) | unknown | Magnesium and cobalt efflux protein CorC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (39/44); total (39/44) | |||||||||||
ACCCGACACCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGACGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAACTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCTTGAAAGAAACGTCCGAAAAGGGATTGGAA > 1/1379694‑1380176 | aCCCGACACCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCga > 1:201358/1‑251 (MQ=255)aCCCGACACCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCga > 1:633311/1‑251 (MQ=255) ccGACCCCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGGGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCgatg < 1:186606/251‑1 (MQ=255) acacCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGatgatg > 1:312666/1‑251 (MQ=255) cacCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATgg < 1:333842/251‑1 (MQ=255) cacCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATgg < 1:428818/251‑1 (MQ=255) ccGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGgtg < 1:198894/251‑1 (MQ=255) gAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCaaa > 1:480987/1‑250 (MQ=255) gAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCaaa > 1:836159/1‑250 (MQ=255) aaTTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAAc < 1:682629/250‑1 (MQ=255) aaTTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAAc < 1:285549/250‑1 (MQ=255) ttCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAgg < 1:76946/251‑1 (MQ=255) cccacAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCaa < 1:545872/250‑1 (MQ=255) ccacAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCaaa > 1:899124/1‑251 (MQ=255) caATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCt < 1:369200/251‑1 (MQ=255) aTGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTcc < 1:325328/225‑1 (MQ=255) aTGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGt > 1:348569/1‑251 (MQ=255) aTGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGt > 1:104479/1‑251 (MQ=255) aTGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGt > 1:311362/1‑251 (MQ=255) aTGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGt > 1:1696/1‑251 (MQ=255) tCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAacac < 1:873562/251‑1 (MQ=255) aaaTCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTgag < 1:740120/250‑1 (MQ=255) aaaTCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTgag < 1:779554/250‑1 (MQ=255) aaTCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGagag < 1:609918/251‑1 (MQ=255) aaTCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGagag < 1:622892/251‑1 (MQ=255) aTCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTgag < 1:774376/248‑1 (MQ=255) tCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAgcg > 1:396362/1‑251 (MQ=255) tCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGa > 1:486304/1‑251 (MQ=255) tCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa < 1:770917/251‑1 (MQ=255) tCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa < 1:346848/251‑1 (MQ=255) tCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa < 1:4153/251‑1 (MQ=255) gTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTgag > 1:717160/1‑233 (MQ=255) gTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa < 1:520452/248‑1 (MQ=255) gTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa < 1:267374/248‑1 (MQ=255) gTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAatat > 1:204091/1‑251 (MQ=255) gTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAatat > 1:231042/1‑251 (MQ=255) gTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAatat > 1:551363/1‑251 (MQ=255) tCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAatat < 1:125120/250‑1 (MQ=255) cGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTgag < 1:570419/226‑1 (MQ=255) cGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATcgcgca > 1:713227/1‑250 (MQ=255) tGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATcgcgcacgcgc < 1:600524/251‑1 (MQ=255) gCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa > 1:393942/1‑228 (MQ=255) gCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCg > 1:148101/1‑251 (MQ=255) cGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATgg < 1:464957/159‑1 (MQ=255) aTCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAacac > 1:761820/1‑200 (MQ=255) aTCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAatat < 1:784321/226‑1 (MQ=255) aTCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAatat > 1:765865/1‑226 (MQ=255) tCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTAc < 1:645655/250‑1 (MQ=255) ggCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGc > 1:73394/1‑249 (MQ=255) aaTCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataata < 1:388166/211‑1 (MQ=255) aTCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa > 1:97612/1‑208 (MQ=255) gTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCAttt < 1:749726/250‑1 (MQ=255) attaaattCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATcgcgca < 1:96660/203‑1 (MQ=255) attaaattCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCggg < 1:143524/248‑1 (MQ=255) cttcCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCg > 1:243190/1‑251 (MQ=255) ggCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATcgcgcacgcgc > 1:775716/1‑190 (MQ=255) ttGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTc < 1:841148/251‑1 (MQ=255) cGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACt < 1:885190/251‑1 (MQ=255) gCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATc > 1:2138/1‑188 (MQ=255) gCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCggg > 1:386569/1‑198 (MQ=255) gCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTaaa > 1:739756/1‑251 (MQ=255) aaaaTACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAatc < 1:64621/251‑1 (MQ=255) aTACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAatcat > 1:361571/1‑250 (MQ=255) aTACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAatc > 1:452878/1‑248 (MQ=255) atatTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGt < 1:64949/193‑1 (MQ=255) atatTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAat < 1:681913/238‑1 (MQ=255) atatTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGAttttt > 1:180880/1‑251 (MQ=255) atTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGAt > 1:230781/1‑222 (MQ=255) tCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATc > 1:138059/1‑168 (MQ=255) cgtcCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCt > 1:788324/1‑74 (MQ=255) cgtcCGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGt < 1:721377/172‑1 (MQ=255) ccGCATCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCCTgaaag < 1:745054/251‑1 (MQ=255) tCGGCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCCTGAAAGAAACg < 1:504684/251‑1 (MQ=255) ggCAATTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACt > 1:602538/1‑211 (MQ=255) aaTTACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCCTGAAAGAAACGTCCGa > 1:250903/1‑251 (MQ=255) ttACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCataa > 1:835879/1‑102 (MQ=255) ttACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAatat < 1:601575/105‑1 (MQ=255) ttACCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATc < 1:901440/175‑1 (MQ=255) aCCGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCCTGAAAGAAACGTCCGAAAAg < 1:485721/251‑1 (MQ=255) cGGGAAGCGCGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCCTGAAAGAAACGTCCGAAAAggg < 1:442182/251‑1 (MQ=255) gcgcGAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCCTGAAAGAAACGTCCGAAAAGGGATTGGa > 1:99946/1‑251 (MQ=255) cgcgAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCCTGAAAGAAACGTCCGAAAAGGGATTGGaa < 1:13838/251‑1 (MQ=255) cgAGTGGGCGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAGCTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAAt > 1:754058/1‑161 (MQ=255) | ACCCGACACCGCGCCGAATTCATCCACCACAATCGCCATGTGGAAGCGCTCGGAACGGAAATCCTTCAGCATTCTGTCTACTCGTTTGCTTTCCGGCACGATCATGGTCGGGCGAATCATGGTCAGCAAATTAAATTCTTCCGCATTGGCGCGCAGGAATTTCAATAAATCTTTGGCGTGCAAAATACCGACAATATTGTCGCGGTCGTCCGCATCGGCAATTACCGGGAAGCGCGAGTGGACGGATTCGATGATGGTGTCCAAACAGGAATCCAAATCTTGATCGGTTTCGATAAACACGATTTGAGAGCGCGGAATCATAATATCGCGCACGCGCAACTCGGCGATTTCCATTACGCCTTCAATCATTTCGCGGGTATTTTGGTCGATTAAATCGTTTTGTTCGGAATCTCGGATTACTTCCACTAAATCATCGCGATTTTTAAGCTCGCCTTGAAAGAAACGTCCGAAAAGGGATTGGAA > 1/1379694‑1380176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |