| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,352,030 | A→G | V112A (GTG→GCG) | unknown ← | Probable sugar efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,352,030 | 0 | A | G | 100.0% | 204.1 / NA | 83 | V112A (GTG→GCG) | unknown | Probable sugar efflux transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (53/30); total (53/30) | |||||||||||
AGGCTCGCCAAGTGCGGCAGGAAGCGATAAAGCAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACACCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAACAAGGCGACGGGTA > 1/1351784‑1352273 | aGGCTCGCCAAGTGCGGCAGGAAGCGATAAAGCAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAAcgcca > 1:71834/1‑250 (MQ=255) cGCCAAGTGCGGCAGGAAGCGATAAAGCAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGa > 1:240148/1‑251 (MQ=255) cGGCAGGAAGCGATAAAGCAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGAt < 1:8633/250‑1 (MQ=255) cAGGAAGCGATAAAGCAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTCCCCATTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCGCCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAAc < 1:90371/250‑1 (MQ=255) gCAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCaaaaa > 1:741417/1‑251 (MQ=255) cAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAAt < 1:851254/251‑1 (MQ=255) aTACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGCTTTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGAt > 1:273889/1‑231 (MQ=255) tACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTTCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTCCCCATTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAAcag < 1:444323/234‑1 (MQ=255) aaaCGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATCCTGTCCGATACCCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACgg < 1:36177/251‑1 (MQ=255) cGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGaaa > 1:286559/1‑251 (MQ=255) gAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGatat > 1:717121/1‑251 (MQ=255) gAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGatat > 1:231423/1‑251 (MQ=255) cgcgATAATGCCGAATGCCTCCCGCCACCCAAAATACTGTCCGATACCCCGTCCAAGGGGCAAGCCTAGCCCCATCGCCAACGCGCTCCCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCCCCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATAtggc < 1:113464/251‑1 (MQ=255) cgcgATAATGCCGAATGCCTCCCCCCAACCAAAATCCTGCCCGATACCCCGTCCAGGGGGCAAGCCTAGCCCCATCGCCAACGCGCTCCCCATGGCCAGCAC‑CCCGATCGCTTGTGT‑TTTTTTATCTTTCGGTGCCCCCCGCACCGCAAGGGATGTGGTAAGGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATAtggc < 1:370245/251‑1 (MQ=255) cgcgATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATACCCCGTCCAAGGGGCAAGCCTAGCACCACCGCCAACGCGCTACCCATTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCCCCCGCACCGCAGGGGATGTGGAAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATAtggc < 1:811314/251‑1 (MQ=255) cgcgATAATGCCGAATGCCTCACGCCAACCAAAATACTGCCCGATACCCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCTTTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAAAAAATTGCGTGGGA‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATAtggc < 1:322420/251‑1 (MQ=255) aatcccccaccccaaccaaAATACTGTCCAATAACCCGTCCAAGGGCCAACCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCCCCCGCACCGCAAGGGATGTGGTAATGGACCAAAAAATTGCGTGGGA‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAacac < 1:387713/240‑1 (MQ=255) gCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAAt > 1:717829/1‑251 (MQ=255) ccTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATa > 1:665647/1‑251 (MQ=255) cTCACGCCAACCAAAATACTGTCCGATACCCCGTCCAAGGGGAAAGCCTAGCCCCATCGCCAACGCGCTCCCCATTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATaa < 1:88397/251‑1 (MQ=255) cgcaaaccaaAATCCTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCCCCATCGCCAACGCGCTCCCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGAACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAagag < 1:466338/247‑1 (MQ=255) cGCCAACAAAAATACTGCCCGATAACCCGCCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTCCCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAagag < 1:226883/251‑1 (MQ=255) ccaaAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAAcagc < 1:546934/183‑1 (MQ=255) ccaaAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAAcag > 1:116321/1‑182 (MQ=255) ccaaAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAag > 1:82433/1‑243 (MQ=255) ccaaAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTaa > 1:30004/1‑250 (MQ=255) ccaaAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAAt > 1:338291/1‑251 (MQ=255) ccaaAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAAt > 1:70196/1‑251 (MQ=255) cTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAgg > 1:675472/1‑250 (MQ=255) gTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATAtggc > 1:9521/1‑213 (MQ=255) gTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAaga > 1:607138/1‑234 (MQ=255) gTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAgg > 1:500613/1‑248 (MQ=255) gTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGAGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAgg > 1:474400/1‑248 (MQ=255) ccGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTgcg > 1:813965/1‑251 (MQ=255) aTAACCCGCCCAAGGGGCAAGCCTAGCCCCACCGCCAACGCGCTCCCCATGGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTCCGGTGCCCCCCGCCCCGCAAGGGATGTGGAAATGGACCAGAAAATTGCGGGGGT‑AACCGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCg < 1:405209/251‑1 (MQ=255) cccGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTc > 1:628283/1‑250 (MQ=255) gTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGAt < 1:147016/155‑1 (MQ=255) gTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACCATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGt > 1:780896/1‑251 (MQ=255) cccAAGGGGCAAGCCTAGCACCATCGCCACCGCGCTCCCCATTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCCCCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGtt < 1:338877/250‑1 (MQ=255) ccaagggggCAAGCCTGGCCCCATCGCCAACGCGCTCCCCA‑TGCCCGCAACCCCGATCGCCTGTTT‑TTTTTTTTCTTTCGGTCCCCCCCCCACCGCAAGGAAGGGGTTAATGGACCAGAAAATTGCG‑GGGTAAAACGCAACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGtt < 1:1396/246‑1 (MQ=255) aaGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTg > 1:238773/1‑251 (MQ=255) gggCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTg > 1:215709/1‑248 (MQ=255) gCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTc > 1:513825/1‑234 (MQ=255) gCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTc > 1:224441/1‑234 (MQ=255) gCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTa > 1:233206/1‑251 (MQ=255) gCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTa > 1:542694/1‑251 (MQ=255) accACCATCGCCAACGCGCTCCCCATTGCCAGCAC‑CCCGATCGCCTGTGC‑TTTTTTATCTTCCGGTGCCCCCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACAt < 1:99437/249‑1 (MQ=255) cATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCCCCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AACCGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACg < 1:730318/251‑1 (MQ=255) ccAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAg > 1:3907/1‑250 (MQ=255) cgcTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGATTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACAt > 1:456803/1‑250 (MQ=255) aCCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAggg > 1:180823/1‑251 (MQ=255) aTTGCCAGCAC‑CCCGATCGCCTGTGT‑TTTTTTATCTTTCGGTCCCCCCCGCCCCGCAAGGGATGTGGTAATGGCCCAGAAAATTGCGTGGGT‑AACCGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACgg < 1:328225/148‑1 (MQ=255) ttGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAaga > 1:189758/1‑180 (MQ=255) gCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATc > 1:618175/1‑186 (MQ=255) cccGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCAACCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCAt > 1:879488/1‑251 (MQ=255) ccTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTg > 1:341/1‑251 (MQ=255) ttgtgC‑TTTTTTATCTTTCGGTGCCACCCGCCCCGCAAGGGATGTGGTAATGGACCAAAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGa < 1:799002/250‑1 (MQ=255) tttATCTTTCGGTGCCCCCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGcc < 1:742884/251‑1 (MQ=255) ttATCTTTCGGTGCCCCCCGCACCGCAGGGGATGTGGTAATGGACCAGAAAATTGCGTGGGA‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGccc < 1:769485/251‑1 (MQ=255) tttCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCtgctt < 1:118386/251‑1 (MQ=255) ggTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGat > 1:848144/1‑116 (MQ=255) gTGCCCCCCGCACCGCAAGGGATGTGGTAATGGACCAAAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGc < 1:143306/175‑1 (MQ=255) gTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTtgctg > 1:326712/1‑250 (MQ=255) cACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAAcagc > 1:204135/1‑76 (MQ=255) ccgcaAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAggg > 1:885509/1‑195 (MQ=255) ccgcaAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCa > 1:679952/1‑251 (MQ=255) caAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCaaaa > 1:86199/1‑251 (MQ=255) ggATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAggg > 1:70591/1‑188 (MQ=255) ggATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACttt > 1:891064/1‑251 (MQ=255) aTGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAAc > 1:524930/1‑205 (MQ=255) gtgGTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACa > 1:332033/1‑178 (MQ=255) gTAATGGACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAAt > 1:807386/1‑251 (MQ=255) ggACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCgg > 1:545254/1‑251 (MQ=255) gACCAGAAAATTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGa > 1:825394/1‑251 (MQ=255) aCCAGAAAATTGCGTGGGT‑AACCGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGAt < 1:108590/251‑1 (MQ=255) aCCAGAAAATTGCGTGGGA‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGAt < 1:477667/251‑1 (MQ=255) aaaaaaTTGCGTGGGT‑AACCGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAAc < 1:10222/249‑1 (MQ=255) aaaaTTGCGTGGGT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAAc < 1:813323/249‑1 (MQ=255) ggT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTc > 1:539806/1‑117 (MQ=255) ggT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAACAAGGCGACGGGTa > 1:765110/1‑251 (MQ=255) ggT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAACAAGGCGACGGGTa > 1:8850/1‑251 (MQ=255) ggT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAACAAGGCGACGGGTa > 1:396023/1‑251 (MQ=255) ggT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAACAAGGCGACGGGTa > 1:901219/1‑251 (MQ=255) ggT‑AAACGCCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAACAAGGCGACGGGTa > 1:379790/1‑251 (MQ=255) | AGGCTCGCCAAGTGCGGCAGGAAGCGATAAAGCAATACTAACACGGCAAACGCCAGGAACGCGATAATGCCGAATGCCTCACGCCAACCAAAATACTGTCCGATAACCCGTCCAAGGGGCAAGCCTAGCACCATCGCCAACGCGCTACCCATTGCCAGCAA‑CCCGATCGCCTGTGC‑TTTTTTATCTTTCGGTGCCACCCGCACCGCAAGGGATGTGGTAATGGACCAGAAAATTGCGTGGGT‑AAACACCACGCCGATACGGGATAACAGCAGAATCCAAAAATCCCACGCCACAACGGAAAGGATATGGCTGGCGACAAACACAATAAAGAGTTTAATCAGCAGGCTGCGCCGTTCCAGTTTTGCTGTCATTAACATAAACGGCAGCGACATCAGGGAAACAATCCAGGCATAAACGGTGATCATCAGCCCTGCTTGCTGCACCGGGGTTTCAAAACTTTGCGCAATGTCGGATAACAAGGCGACGGGTA > 1/1351784‑1352273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |