Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	1	1,342,187	A→G	S39P (TCA→CCA)	unknown ←	Glutaredoxin 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	1	1,342,187	0	A	G	100.0%	196.9 / NA	70	S39P (TCA→CCA)	unknown	Glutaredoxin 2
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (36/34);  total (36/34)

CATATTCAGGCAGCCCTAGGCGGGTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTTCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGACGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCACTTTTACATCGTCAAGGCTACATAACCAC  >  1/1341962‑1342429                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   cATATTCAGGCAGCCCTAGGCGGGTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGAt                                                                                                                                                                                                                            <  1:338484/250‑1 (MQ=255)          gCAGCCCTAGGCGGGTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAg                                                                                                                                                                                                                   <  1:211888/250‑1 (MQ=255)          gCAGCCCTAGGCGGGTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAg                                                                                                                                                                                                                   <  1:474985/250‑1 (MQ=255)             gCCCTAGGCGGGTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGAt                                                                                                                                                                                                                            <  1:844464/238‑1 (MQ=255)                 tAGGCGGGTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACgg                                                                                                                                                                                                           <  1:366682/251‑1 (MQ=255)                       ggTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGt                                                                                                                                                                                                                         <  1:4271/231‑1 (MQ=255)                                           gatgatTTTGATAGCTGCCGACCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATg                                                                                                                                                                                 >  1:587920/1‑251 (MQ=255)                                                               aCCTGCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACg                                                                                                                                                              <  1:206529/250‑1 (MQ=255)                                                                   gCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGATCATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCaa                                                                                                                                                         >  1:880305/1‑251 (MQ=255)                                                                   gCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCaa                                                                                                                                                         >  1:181372/1‑251 (MQ=255)                                                                   gCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCaa                                                                                                                                                         >  1:508548/1‑251 (MQ=255)                                                                   gCTTTAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCaa                                                                                                                                                         >  1:28199/1‑251 (MQ=255)                                                                       tAACCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGt                                                                                                                                                     <  1:547509/251‑1 (MQ=255)                                                                         aCCAGGCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCg                                                                                                                                                   <  1:92905/251‑1 (MQ=255)                                                                             ggCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTaaa                                                                                                                                               >  1:338736/1‑251 (MQ=255)                                                                             ggCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTaaa                                                                                                                                               >  1:76934/1‑251 (MQ=255)                                                                             ggCTGCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTaaa                                                                                                                                               >  1:541069/1‑251 (MQ=255)                                                                               ctgcTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAAc                                                                                                                                              <  1:237368/247‑1 (MQ=255)                                                                               ctgcTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAAc                                                                                                                                              <  1:814019/247‑1 (MQ=255)                                                                               ctgcTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAAc                                                                                                                                              <  1:626935/247‑1 (MQ=255)                                                                                    aCTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAg                                                                                                                                        >  1:126423/1‑251 (MQ=255)                                                                                     cTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAg                                                                                                                                                                                                                   >  1:374309/1‑175 (MQ=255)                                                                                     cTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGc                                                                                                                                       <  1:758799/251‑1 (MQ=255)                                                                                               cACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAAc                                                                                                                                              >  1:317076/1‑234 (MQ=255)                                                                                                   gTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAAc                                                                                                                                                                                                       >  1:736351/1‑173 (MQ=255)                                                                                                   gTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGAtc                                                                                                                            <  1:133314/248‑1 (MQ=255)                                                                                                          aTAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCTTGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTttgttg                                                                                                                  <  1:195490/251‑1 (MQ=255)                                                                                                                        ccATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAg                                                                                                    >  1:399890/1‑251 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGc                                                                                                                                       <  1:119974/206‑1 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATaa                                                                                                                                <  1:217103/213‑1 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTttg                                                                                                                     <  1:277612/224‑1 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTgg                                                                                            >  1:512203/1‑249 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAt                                                                                          >  1:505695/1‑251 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAt                                                                                          >  1:761125/1‑251 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAt                                                                                          >  1:138925/1‑251 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAt                                                                                          >  1:895823/1‑251 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAt                                                                                          >  1:465565/1‑251 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAt                                                                                          >  1:711917/1‑251 (MQ=255)                                                                                                                                  catcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTCTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCAttt                                                                                                                                                                                                                                 >  1:156949/1‑116 (MQ=255)                                                                                                                                    tcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCa                                                                                                                                                                                   <  1:321433/160‑1 (MQ=255)                                                                                                                                    tcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAttt                                                                                        >  1:553248/1‑251 (MQ=255)                                                                                                                                    tcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGAttt                                                                                        >  1:289733/1‑251 (MQ=255)                                                                                                                                    tcaATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGCGGAttt                                                                                        >  1:798934/1‑251 (MQ=255)                                                                                                                                       atatAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGc                                                                                                                                       <  1:548981/201‑1 (MQ=255)                                                                                                                                       atatAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATaa                                                                                                                                <  1:93409/208‑1 (MQ=255)                                                                                                                                       atatAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAg                                                                                                                               <  1:127397/209‑1 (MQ=255)                                                                                                                                       atatAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTgg                                                                                     >  1:454702/1‑251 (MQ=255)                                                                                                                                       atatAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTgg                                                                                     >  1:656064/1‑251 (MQ=255)                                                                                                                                       atatAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTgg                                                                                     >  1:603770/1‑251 (MQ=255)                                                                                                                                        tataGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGc                                                                                    <  1:7214/251‑1 (MQ=255)                                                                                                                                         ataGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGc                                                                                                                                       <  1:643355/199‑1 (MQ=255)                                                                                                                                         ataGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCG‑AAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAg                                                                                  <  1:529072/251‑1 (MQ=255)                                                                                                                                             cgcACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAGACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCAc                                                                                                          <  1:614676/224‑1 (MQ=255)                                                                                                                                                   aTGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTa                                                                         >  1:758811/1‑251 (MQ=255)                                                                                                                                                    tGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTaa                                                                        >  1:655129/1‑251 (MQ=255)                                                                                                                                                      tCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAAt                                                                       <  1:538848/250‑1 (MQ=255)                                                                                                                                                      tCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATg                                                                      <  1:774171/251‑1 (MQ=255)                                                                                                                                                            cTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGTTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCctct                                                                 >  1:60136/1‑250 (MQ=255)                                                                                                                                                              ttCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTttgttg                                                                                                                  >  1:626598/1‑199 (MQ=255)                                                                                                                                                                  ggCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGcgcac                                                                                                                                                                      >  1:867294/1‑143 (MQ=255)                                                                                                                                                                      tGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAAc                                                                                                                                              >  1:494091/1‑163 (MQ=255)                                                                                                                                                                        gCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGAt                                                                                                                             >  1:490026/1‑178 (MQ=255)                                                                                                                                                                                               aaTCGGCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCa                               >  1:164832/1‑249 (MQ=255)                                                                                                                                                                                                    gCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTgccggcgtttttaggtcg                                                                     <  1:856494/206‑18 (MQ=255)                                                                                                                                                                                                    gCACCACTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGAc                                                          <  1:543635/217‑1 (MQ=255)                                                                                                                                                                                                     caccacTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCACTTTTAc                        <  1:487404/250‑1 (MQ=255)                                                                                                                                                                                                      accacTTTTTTGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCACTTTTACAt                      <  1:686833/251‑1 (MQ=255)                                                                                                                                                                                                            tttttGCCGACCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCACTTTTACATCGTCaa                >  1:877494/1‑251 (MQ=255)                                                                                                                                                                                                                     aCCAGTCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCACTTTTACATCGTCAAGGCTACAt        <  1:635590/250‑1 (MQ=255)                                                                                                                                                                                                                          tCGGATTGGCGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCACTTTTACATCGTCAAGGCTACATcaccac  <  1:238040/251‑1 (MQ=255)                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   CATATTCAGGCAGCCCTAGGCGGGTAAAGCGTGGGATGACCAGATGATTTTGATAGCTGCCGACCTGCTTTAACCAGGCTTCTACTTCCGGGCGCACCGTTTCCGATAACATTTTCTCGCCATAGCGTTCATCAATATAGCGCACAATGTCCAAACTTTCCGGCATGGCTTCGCCGTTTTCTTTCACTAAAATCGGCACCACTTTTTTGCCGACCAGTCGGATTGACGTTTCCGCGTCATCATTTAAGATGGTCACGAGTTCAACGGGAACATTTTTCAAGCCGAAAATCATGCGGGCGCGCACGCAAAACGGGCAATGGTCGTAAACATAAAGCTTCATAAGATCTCCTTTGTTGGTTTTCACGGAAAGTGCGGTGGATTTTGGCAGTGTTTTTTAATGCCTCTCCACGACCTAAAAACGCCGGCAAAATCCACCGCACTTTTACATCGTCAAGGCTACATAACCAC  >  1/1341962‑1342429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑