| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,335,879 | T→C | I134V (ATA→GTA) | unknown ← | Cytolethal distending toxin subunit B, DNase I‑like |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,335,879 | 0 | T | C | 100.0% | 239.2 / NA | 83 | I134V (ATA→GTA) | unknown | Cytolethal distending toxin subunit B, DNase I‑like |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (40/43); total (40/43) | |||||||||||
CCTGTCTTAATGCAGCTTCCAGATTAACCGGCGCACGATTGAAATCACCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTATGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTACCATCAAAATATCTGCACCTTGTTCTCC > 1/1335639‑1336116 | ccTGTCTTAATGCAGCTTCCAGATTAACCGGCGCACGATTGAAATCACCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCt < 1:830632/251‑1 (MQ=255) gTCTTAATGCAGCTTCCAGATTAACCGGCGCACGATTGAAATCACCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACTACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCa > 1:188946/1‑251 (MQ=255) gTCTTAATGCAGCTTCCAGATTAACCGGCGCACGATTGAAATCACCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATaa > 1:730083/1‑243 (MQ=255) cTTCCAGATTAACCGGCGCACGATTGAAATCACCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTgacga < 1:713103/251‑1 (MQ=255) aaaTCACCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTc < 1:590858/250‑1 (MQ=255) aCCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTg > 1:723478/1‑251 (MQ=255) aTCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACAt > 1:645047/1‑250 (MQ=255) aGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTaaa > 1:833421/1‑251 (MQ=255) aGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTaaa > 1:806254/1‑251 (MQ=255) gCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTaaa > 1:720574/1‑250 (MQ=255) gCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTaaa > 1:584078/1‑250 (MQ=255) gCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTaaa > 1:732418/1‑250 (MQ=255) ttCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGTCTTGACGACGTGACACGGTAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAatat < 1:685649/251‑1 (MQ=255) ttCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAAc > 1:788624/1‑236 (MQ=255) ttCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAatat < 1:138330/251‑1 (MQ=255) ttCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAatat < 1:546575/251‑1 (MQ=255) ttCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAatat < 1:122243/251‑1 (MQ=255) gTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGcccc < 1:700785/220‑1 (MQ=255) tgatgaTGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGAcc < 1:155014/250‑1 (MQ=255) atgGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATAttt > 1:127461/1‑251 (MQ=255) ggTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAatat > 1:524495/1‑238 (MQ=255) tgatgaGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGa < 1:833513/250‑1 (MQ=255) tgatgaGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGAc < 1:761242/251‑1 (MQ=255) tgatgaGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGAc < 1:110782/251‑1 (MQ=255) ggTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGAt < 1:684636/180‑1 (MQ=255) aaGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATc > 1:597033/1‑154 (MQ=255) aaGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTgacga > 1:1663/1‑164 (MQ=255) aaGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTa > 1:512562/1‑251 (MQ=255) gtagtGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACg > 1:215819/1‑239 (MQ=255) aGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAAtt > 1:148562/1‑250 (MQ=255) atTACGAAATAAACTTACCGCATCAGAACCGCCTGTGGCCAAAGCATGCAATGAAAAAAATACATCAGGTCCAATGCGGATACCTACTGCCGGGCGAGAATGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTAGACGGCGAGACACGATAGCTAAGTGCACTCGGTTTGCCAGAACAGCTAAACGGGAATAATAAATATAGACCATATTTgg < 1:644768/225‑1 (MQ=255) ttACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGt < 1:264081/251‑1 (MQ=255) gAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGAc > 1:293571/1‑222 (MQ=255) gAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTatat > 1:509695/1‑251 (MQ=255) aaTTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTatat < 1:462713/250‑1 (MQ=255) aaTTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTatat < 1:221429/250‑1 (MQ=255) aTTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTc < 1:558697/251‑1 (MQ=255) aaaCTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAataata < 1:20182/197‑1 (MQ=255) tACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTg < 1:168489/251‑1 (MQ=255) cATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCg < 1:577018/249‑1 (MQ=255) cATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGtt > 1:495034/1‑251 (MQ=255) cATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGtt > 1:787872/1‑251 (MQ=255) gAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAatat < 1:491253/187‑1 (MQ=255) gAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTcccc > 1:792785/1‑250 (MQ=255) ccaccTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAatat > 1:176832/1‑184 (MQ=255) ccTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTg > 1:656980/1‑251 (MQ=255) gtgGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAg > 1:349946/1‑135 (MQ=255) ggCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAataata < 1:306038/171‑1 (MQ=255) gCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATAtt < 1:694438/185‑1 (MQ=255) cAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTc < 1:526970/251‑1 (MQ=255) aGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGAcc < 1:333973/175‑1 (MQ=255) aGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGt < 1:874695/210‑1 (MQ=255) aGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTg > 1:5151/1‑251 (MQ=255) aGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTg > 1:93611/1‑251 (MQ=255) aTGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAgg < 1:529182/251‑1 (MQ=255) aaaTACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCatat > 1:546816/1‑164 (MQ=255) aaaTACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAAt < 1:164607/228‑1 (MQ=255) aaaTACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCg > 1:225930/1‑251 (MQ=255) aTACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGAc < 1:774701/157‑1 (MQ=255) cATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAgg > 1:170052/1‑189 (MQ=255) cATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACtt > 1:95788/1‑251 (MQ=255) cATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACtt > 1:577513/1‑251 (MQ=255) gTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAAc > 1:113779/1‑130 (MQ=255) gTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAGATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTaa > 1:613853/1‑251 (MQ=255) gTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAAtt < 1:891587/179‑1 (MQ=255) gTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTAc > 1:175645/1‑236 (MQ=255) gTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTaa > 1:111313/1‑251 (MQ=255) gTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTaa > 1:545852/1‑251 (MQ=255) gTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAACGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTa < 1:627201/100‑1 (MQ=255) tACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATc < 1:668578/124‑1 (MQ=255) aaTGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAAc < 1:253827/251‑1 (MQ=255) aTGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAAcc < 1:798090/251‑1 (MQ=255) tGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACg < 1:730716/124‑1 (MQ=255) aCTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTAc < 1:238337/251‑1 (MQ=255) aCTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTAc < 1:193094/251‑1 (MQ=255) cTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTAcc < 1:686884/251‑1 (MQ=255) ggCGAGATTGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTAc < 1:62998/244‑1 (MQ=255) ttGAAGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTACCATCAAAatat > 1:868599/1‑248 (MQ=255) aaGCACAGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTACCATCAAAATATCTGCAc < 1:826224/251‑1 (MQ=255) cacaGAAGAATCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTACCATCAAAATATCTGCAcc < 1:98103/249‑1 (MQ=255) gaagaaTCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTc > 1:44661/1‑152 (MQ=255) aaTCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTACCATCAAAATATCTGCACCTTGTTCTcc > 1:596194/1‑250 (MQ=255) aaTCAGAATGTACGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTACCATCAAAATATCTGCACCTTGTTCTcc < 1:253859/250‑1 (MQ=255) | CCTGTCTTAATGCAGCTTCCAGATTAACCGGCGCACGATTGAAATCACCAACAACCATCCAGCTATATCCTCGTCTTTCCGGTGATGATGGTGATGAGGTAAAAGTAGTGAAGATATTACGAATTAAACTTACCGCATCAGAACCACCTGTGGCCAAAGCATGCACTGTAAAAAATACATCAGTACCAATGCGGATACCTACTGCCGGGCGAGATTGAAGCACAGAAGAATCAGAATGTATGATAAAAGCTTCATCGGCTTGACGACGTGACACGATAGCTAAGTTCACTCGGTTTGCCCCAACATCTAAACGGGAATAATAAATATAGACCATATTTGGACGGGAGCGAGTACCTAAATTCCAGGTATATTCCTCAATTGGCGTTCCCCCATGTTGAATTACTCGTGAGGTTCTTACTGCCGAACTTGGTAATGAACCCGCTTCTTGTACCATCAAAATATCTGCACCTTGTTCTCC > 1/1335639‑1336116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |