| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,282,598 | C→T | N741N (AAC→AAT) | unknown → | ATP‑dependent protease La (EC 3.4.21.53) Type I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,282,598 | 0 | C | T | 98.7% | 196.3 / NA | 74 | N741N (AAC→AAT) | unknown | ATP‑dependent protease La (EC 3.4.21.53) Type I |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (28/45); minor base G (1/0); total (29/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCACGAAAAACGTGATATTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAACGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCAAAAGCCAATTATCATCGAATAATTTGGCTTTTTTA > 1/1282352‑1282842 | ccACGAAAAACGTGATATTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGa < 1:32338/251‑1 (MQ=255) aaaaaCGTGATATTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGa < 1:696693/250‑1 (MQ=255) cGTGATATTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGa < 1:449844/251‑1 (MQ=255) atTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGa < 1:317546/239‑1 (MQ=255) atTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGatat > 1:251609/1‑251 (MQ=255) atTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGatat < 1:745999/251‑1 (MQ=255) atTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGat < 1:278303/249‑1 (MQ=255) caTCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCgg > 1:755748/1‑251 (MQ=255) caTCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCgg > 1:137025/1‑251 (MQ=255) caTCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCgg < 1:488920/251‑1 (MQ=255) tccgtgtgCCGGACGGCGCCACACCGAAAGATGGCCCGAGCACAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGACAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGaa < 1:133907/247‑1 (MQ=255) tCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGaa > 1:763743/1‑251 (MQ=255) tCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGaa < 1:224663/251‑1 (MQ=255) gtgCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATg > 1:681066/1‑250 (MQ=255) gcgcCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAgg > 1:615433/1‑216 (MQ=255) cgcCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATc < 1:484301/251‑1 (MQ=255) gcCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGGGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGAt > 1:23462/1‑249 (MQ=255) cacCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAg < 1:863858/251‑1 (MQ=255) gcgcAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACg < 1:623215/223‑1 (MQ=255) cgcAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGAcc < 1:193152/250‑1 (MQ=255) ggATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTTAAAGAGAAGTTGCTGGCGGCACACCGGGGCGGAATTAAAACCGTGATTATTTCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATcga > 1:125443/1‑250 (MQ=255) gATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCgg < 1:862463/236‑1 (MQ=255) aTTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATcgacg < 1:556359/250‑1 (MQ=255) gCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGt > 1:750155/1‑251 (MQ=255) cAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGGGGAGACCAACGACGAAGTg > 1:436581/1‑251 (MQ=255) gtgCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGGGGAATTAAAACCGGGTTTATTCCGAAGGATAAGGGGAAGGTTTTGGAAAAAATCCCGGAAAAGCCAAAACGGAACCTGAAGATTCATGGGGGGGAGACCTTCGAGGAAGGGCTAg > 1:554790/1‑251 (MQ=255) cACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGc < 1:875889/250‑1 (MQ=255) cACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGc < 1:123285/250‑1 (MQ=255) ccGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGa < 1:576353/178‑1 (MQ=255) ccGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGc < 1:249108/248‑1 (MQ=255) aTTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCAc < 1:680608/251‑1 (MQ=255) aTTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCAc < 1:576470/251‑1 (MQ=255) aTTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCAc < 1:661169/251‑1 (MQ=255) aTTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCAc < 1:285539/251‑1 (MQ=255) ggTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAAc < 1:812576/194‑1 (MQ=255) ggTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTa < 1:86299/238‑1 (MQ=255) ggTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGc > 1:880008/1‑241 (MQ=255) tttCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGaa < 1:786575/251‑1 (MQ=255) cTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGAtt < 1:21886/202‑1 (MQ=255) gTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAg < 1:777729/225‑1 (MQ=255) aaTCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGAcc > 1:798668/1‑194 (MQ=255) aaTCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTc < 1:692946/251‑1 (MQ=255) agGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGc < 1:656727/249‑1 (MQ=255) gTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAAtgtg < 1:415368/123‑1 (MQ=255) ggCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGAcc > 1:161832/1‑184 (MQ=255) ggCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGc < 1:203586/202‑1 (MQ=255) cGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATcc < 1:475875/250‑1 (MQ=255) ccGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGt > 1:505061/1‑228 (MQ=255) ggTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGa < 1:281909/154‑1 (MQ=255) aaaTCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTg > 1:771211/1‑251 (MQ=255) tCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGc < 1:837145/250‑1 (MQ=255) tCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTT‑AAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCg < 1:896145/250‑1 (MQ=255) cTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAAGCCGCCGTTAGGCGTTGAGTGTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCgg < 1:466822/251‑1 (MQ=255) gcgcGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACg > 1:497516/1‑132 (MQ=255) gcgcGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGc > 1:885814/1‑183 (MQ=255) gTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGAcc < 1:187250/134‑1 (MQ=255) aaaaGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCgg < 1:119703/251‑1 (MQ=255) gTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCaattaat > 1:337296/1‑251 (MQ=255) ttGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCaattaat < 1:614160/250‑1 (MQ=255) cTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAg < 1:12399/251‑1 (MQ=255) tGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAACGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCACTTCATTCAgt > 1:421476/1‑251 (MQ=255) ggcggcACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAgtg > 1:650203/1‑251 (MQ=255) gcggcACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAgtg > 1:476050/1‑250 (MQ=255) acacCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTc < 1:394128/251‑1 (MQ=255) acacCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTc < 1:142252/251‑1 (MQ=255) cacCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGc < 1:403583/131‑1 (MQ=255) ccGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCaaa > 1:136043/1‑251 (MQ=255) gCGGAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCAAAAGcc < 1:27730/250‑1 (MQ=255) gAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTc > 1:232361/1‑230 (MQ=255) gAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTc > 1:698569/1‑230 (MQ=255) gAATTAAAACCGTGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCAAAAGCCAAtt > 1:567317/1‑251 (MQ=255) tGATTATTCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCAAAAGCCAATTATCATCGaataa > 1:567817/1‑251 (MQ=255) ttattCCGAAAGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCAAAAGCCAATTATCATCGAATAAttt > 1:21561/1‑251 (MQ=255) aGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGa < 1:853565/56‑1 (MQ=255) aGATAATGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCAAAAGCCAATTATCATCGAATAATTTGGCTTTTTTa > 1:74004/1‑251 (MQ=255) | CCACGAAAAACGTGATATTCACATCCATGTGCCGGACGGCGCCACACCGAAAGATGGCCCGAGCGCAGGGATTGCAATGTGCACCGCATTGGTTTCCTGTTTAACCGGCAATCCGGTGAAATCAGAGGTGGCGATGACCGGTGAAATCAGTCTGCGCGGCAAAGTGTTGCCGATTGGCGGTTTAAAAGAGAAGTTGCTGGCGGCACACCGTGGCGGAATTAAAACCGTGATTATTCCGAAAGATAACGTGAAGGATTTGGAAGATATTCCGGAAAATGCAAAACGTGATCTGAAGATTCATGCGGTGGAGACCATCGACGAAGTGCTAGGCCTTGCACTGGAAAATCCGCCGTTAGGCGTTGAGTTTGTCAAGCTGGATCCAATTTCGGCAGTGAAAAGCGGTCGTCGTAAGAAAACCGTTTCCAGAAGTGCGGTCAATTAATTCAGTGTTTTTCAAAAGCCAATTATCATCGAATAATTTGGCTTTTTTA > 1/1282352‑1282842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |