| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,247,944 | T→C | intergenic (+282/‑33) | unknown → / → unknown | Glycine betaine ABC transport system, permease protein OpuAB / Glycine betaine ABC transport system, glycine betaine‑binding protein OpuAC/Glycine betaine ABC transport system, ATP‑binding protein OpuAA (EC 3.6.3.32) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,247,944 | 0 | T | C | 100.0% | 232.3 / NA | 82 | intergenic (+282/‑33) | unknown/unknown | Glycine betaine ABC transport system, permease protein OpuAB / Glycine betaine ABC transport system, glycine betaine‑binding protein OpuAC/Glycine betaine ABC transport system, ATP‑binding protein OpuAA (EC 3.6.3.32) |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/38); total (44/38) | |||||||||||
CCATACTACAACTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCTATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGATGGAGATGTATATTTTC > 1/1247698‑1248178 | ccATACTACAACTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGt > 1:753902/1‑251 (MQ=255) tactacAACTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTAcc < 1:504453/251‑1 (MQ=255) cAACTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTaa < 1:497034/251‑1 (MQ=255) aCTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAg > 1:259232/1‑251 (MQ=255) aCTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAg > 1:226352/1‑251 (MQ=255) cTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAg > 1:735066/1‑250 (MQ=255) aCTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAg < 1:489075/251‑1 (MQ=255) atataACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAgg < 1:517671/232‑1 (MQ=255) atataACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAAt > 1:562444/1‑250 (MQ=255) atataACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAAt > 1:154483/1‑250 (MQ=255) cTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCtt > 1:661314/1‑207 (MQ=255) cTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCacac > 1:223789/1‑249 (MQ=255) cTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCacac > 1:183264/1‑249 (MQ=255) gTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCttt > 1:687475/1‑251 (MQ=255) gACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAg < 1:138089/232‑1 (MQ=255) aCTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATc < 1:662956/250‑1 (MQ=255) aCTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCg < 1:686895/251‑1 (MQ=255) aTACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAg > 1:697269/1‑212 (MQ=255) ggAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTcgcg > 1:226106/1‑251 (MQ=255) gaATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCgcggcg > 1:840234/1‑251 (MQ=255) aaTACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGt > 1:745651/1‑205 (MQ=255) aTACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAat < 1:297744/209‑1 (MQ=255) aTACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTa > 1:410529/1‑251 (MQ=255) agagaTCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCCGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCAAAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCa < 1:456092/249‑1 (MQ=255) gagaTCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGt < 1:650447/197‑1 (MQ=255) agaTCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAata > 1:28720/1‑251 (MQ=255) gaTCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAatat > 1:371120/1‑251 (MQ=255) ataaatGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGAc < 1:115693/251‑1 (MQ=255) tAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGc < 1:859342/251‑1 (MQ=255) tAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGc < 1:167308/251‑1 (MQ=255) aaaaaaTCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAg < 1:347399/247‑1 (MQ=255) aaCGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATc < 1:857307/250‑1 (MQ=255) gTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGt > 1:712821/1‑168 (MQ=255) gTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCAt > 1:364897/1‑251 (MQ=255) gTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCAt > 1:169479/1‑251 (MQ=255) aTTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAata > 1:618703/1‑158 (MQ=255) aTTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCAt > 1:488577/1‑249 (MQ=255) aCAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATc < 1:310813/251‑1 (MQ=255) aaCTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAg > 1:349678/1‑251 (MQ=255) cTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGc < 1:364022/251‑1 (MQ=255) cGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCacac > 1:326369/1‑162 (MQ=255) cGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAAtt > 1:416685/1‑250 (MQ=255) gCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCa > 1:562725/1‑179 (MQ=255) gCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTgg > 1:45257/1‑251 (MQ=255) cTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAgg < 1:62027/226‑1 (MQ=255) gTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCg < 1:69679/151‑1 (MQ=255) gTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGc > 1:679932/1‑168 (MQ=255) aTCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTa < 1:664225/251‑1 (MQ=255) aaaaGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTaaa > 1:256308/1‑251 (MQ=255) tACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCacaac < 1:295885/251‑1 (MQ=255) ccGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAg > 1:130394/1‑234 (MQ=255) tATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCAt > 1:577130/1‑251 (MQ=255) tCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGa > 1:374930/1‑251 (MQ=255) gTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTGCCTTTAAAg < 1:294034/70‑1 (MQ=255) gTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCa > 1:680226/1‑251 (MQ=255) gTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCa > 1:478822/1‑251 (MQ=255) gTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCa > 1:125871/1‑251 (MQ=255) tACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGAt < 1:485907/248‑1 (MQ=255) gTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATc > 1:546053/1‑166 (MQ=255) gTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCg < 1:479096/184‑1 (MQ=255) gTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGt > 1:419490/1‑213 (MQ=255) gTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGt > 1:271166/1‑219 (MQ=255) gTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGcc > 1:218041/1‑249 (MQ=255) gTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGcc > 1:651019/1‑249 (MQ=255) gTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGcc > 1:170584/1‑249 (MQ=255) cTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCacaac > 1:808573/1‑227 (MQ=255) ataATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATc < 1:448838/161‑1 (MQ=255) gCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAgg < 1:660218/202‑1 (MQ=255) ctcCCCCGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTg < 1:259547/140‑1 (MQ=255) cccccGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGa < 1:133015/251‑1 (MQ=255) ccccGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTa < 1:121692/179‑1 (MQ=255) ccccGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGAt < 1:411351/226‑1 (MQ=255) ccccGATTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGAt < 1:456928/251‑1 (MQ=255) aTTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAgg > 1:179006/1‑185 (MQ=255) aTTCAGCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACAt < 1:148956/211‑1 (MQ=255) gCACAATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGATGGAGATGtat > 1:293622/1‑251 (MQ=255) acaATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGATGGAGATGTatat < 1:55300/251‑1 (MQ=255) acaATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGATGGAGATGTatat < 1:414938/251‑1 (MQ=255) acaATTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGATGGAGATGTatat < 1:266461/251‑1 (MQ=255) aTTACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAgg < 1:849535/175‑1 (MQ=255) ttACTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGATGGAGATGTATATTTTc < 1:97147/251‑1 (MQ=255) aCTTGGAAGCGCGCCATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAg < 1:341530/231‑1 (MQ=255) | CCATACTACAACTTATAATGAACTTAAAAAGGCTGAGGAATATATAACCCTGTATGACTGATACGGGAGAATACAGAGAGATCAAATAAATGAACATAACAGAAAAAATCACGGAACGTGGTATTACAAACTCAATCGGCAATATGGCCACACGCTGTTTAATCGAACGAAAAGGGATACCGGTTTTATCAGTACACGGTTCTATAATGCTCTCCCCCGATTCAGCACAATTACTTGGAAGCGCGCTATGTACCTTTAAAGCGGTTATGAAGGTAGAATATGAAAAGTAATCGCACACCTTTTATCGAATTTCGCGGCGTAAGCAAATATTATGACGGACAACATGCAGTGCAAACGCTAAATCTGACCATCTATCAAGGCGAATTCTTCGTATTGGTCGGAGGTTCAGGTAGCGGTAAATCCACAACATTGCGCATGATCAACGCCCTCACCGAACCTACAGATGGAGATGTATATTTTC > 1/1247698‑1248178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |