| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,238,215 | A→C | intergenic (‑146/‑241) | unknown ← / → unknown | Glutamine synthetase type I (EC 6.3.1.2)/GTP‑binding protein TypA/BipA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,238,215 | 0 | A | C | 100.0% | 14.7 / NA | 7 | intergenic (‑146/‑241) | unknown/unknown | Glutamine synthetase type I (EC 6.3.1.2)/GTP‑binding protein TypA/BipA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (5/2); total (5/2) | |||||||||||
GCCTTGAATATCGGTAAAACGCAGTAATACAAATTTAATGTCATTTTCTTCAATGAGTTTAAATACATTCTCAATCGCGCTGGGCATAAGTAAATCCTCTATAATAGACATGAGTAAAATGAAAAAGAAACGCTACAAAAATAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTAACAATATAAAAAATCAAAAACAACCTTATTCTTTATATACGCGTTATTTAATTTCATGAATCTTTAATGTGATCACGATCACCATTTTTGTCTCTTTTCTTCTGATTTCGTTCAAATTTTCCACCATTATTTAATAGCTGATCATGTTAAAACGTTGT > 1/1237983‑1238373 | gCCTTGAATATCGGTAAAACGCAGTAATACAAATTTAATGTCATTTTCTTCAATGAGTTTAAATACATTCTCAATCGCGCTGGGCATAAGTAAATCCTCTATAATAGACATGAGTAAAATGAAAAAGAAACGCTACAAAAATAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTCACAATATAAAAAATCaaa > 1:161041/1‑251 (MQ=255) aaTACAAATTTAATGTCATTTTCTTCAATGAGTTTAAATACATTCTCAATCGCGCTGGGCATAAGTAAATCCTCTATAATAGACATGAGTAAAATGAAAAAGAAACGCTACAAAAATAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTCACAATATAAAAAATCAAAAACAACCTTATTCTTTATATAcgcg < 1:634009/251‑1 (MQ=255) tACATTCTCAATCGCGCTGGGCATAAGTAAATCCTCTATAATAGACATGAGTAAAATGAAAAAGAAACGCTACAAAAATAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTCACAATATAAAAAATCAAAAACAACCTTATTCTTTATATACGCGTTATTTAATTTCATGAATCTTTAATGTgatcacgatca > 1:365163/1‑251 (MQ=255) ataataGACATGAGTAAAATGAAAAAGAAACGCTACAAAAATAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTCACAATATAAAAAATCAAAAACAACCTTATTCTTTATATACGCGTTATTTAATTTCATGAATCTTTAATGTGATCACGATCACCATTTTTGTCTCTTTTCTTCTGATTTCGTTCAAAtt < 1:561666/251‑1 (MQ=255) aaaaTAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTCACAatat > 1:457891/1‑103 (MQ=255) aTAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTCACAATATAAAAAATCAAAAACAACCTTATTCTTTATATACGCGTTATTTAATTTCATGAATCTTTAATGTGATCACGATCACCATTTTTGTCTCTTTTCTTCTGATTTCGTTCAAATTTTCCACCATTATTTAATAGCTGATCATGTTAAAACGTTGt > 1:824784/1‑251 (MQ=255) taCTTAGATAAAATACAATAAAATTGTAATTTCACAATATAAAAAATCAAAAACAACCTTATTCTTTATATACGCGTTATTTAATTTCATGAATCTTTAATGTGATCACGATCACCATTTTTGTCTCTTTTCTTCTGATTTCGTTCAAATTTTCCACCATTATTTAAt > 1:627682/1‑168 (MQ=255) | GCCTTGAATATCGGTAAAACGCAGTAATACAAATTTAATGTCATTTTCTTCAATGAGTTTAAATACATTCTCAATCGCGCTGGGCATAAGTAAATCCTCTATAATAGACATGAGTAAAATGAAAAAGAAACGCTACAAAAATAGCATACTATTCATAAAATTCAAGTTATTTTTAAACAAAAATTAATGATAAAAATAAATACTTAGATAAAATACAATAAAATTGTAATTTAACAATATAAAAAATCAAAAACAACCTTATTCTTTATATACGCGTTATTTAATTTCATGAATCTTTAATGTGATCACGATCACCATTTTTGTCTCTTTTCTTCTGATTTCGTTCAAATTTTCCACCATTATTTAATAGCTGATCATGTTAAAACGTTGT > 1/1237983‑1238373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |