Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,223,219 C→T L72L (CTA→TTA)  unknown → Phospholipid ABC transporter ATP‑binding protein MlaF

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,223,2190CT100.0% 208.1 / NA 81L72L (CTA→TTA) unknownPhospholipid ABC transporter ATP‑binding protein MlaF
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (43/38);  total (43/38)

AGGCAATTCAAGCCGTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAACTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGCCGCCGATTTAATGCCTTCCGAACTTTCCGGCGGGATGGCGCGTCGTGCCGCGCTCGCC  >  1/1222976‑1223464
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     
aGGCAATTCAAGCCGTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGGGAAATTCTGTTTGACGGGCAAGATATTTGCAAATTATCCaa                                                                                                                                                                                                                                                >  1:766285/1‑251 (MQ=255)
  gaaatccAAGCCGTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACCCCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCACGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAAc                                                                                                                                                                                                                                               <  1:58416/244‑1 (MQ=255)
     aTTCAAGCCGTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGGTGATGCCTTCCGAAGGAGAAATTCTGTTCGACCGGCAAGATCTTTGTAAATTATCCAACAGTg                                                                                                                                                                                                                                           >  1:284843/1‑251 (MQ=255)
          aGCCGTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGGTCGACGGGCAAGATATTTGCAAATTATCCAAc                                                                                                                                                                                                                                               >  1:770855/1‑242 (MQ=255)
            ccGTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAg                                                                                                                                                                                                                                             >  1:856140/1‑242 (MQ=255)
              gTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGGGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatg                                                                                                                                                                                                                                  >  1:625838/1‑251 (MQ=255)
               tAACCTAGCATTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTCCCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatga                                                                                                                                                                                                                                 <  1:752792/251‑1 (MQ=255)
               tAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGGGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatga                                                                                                                                                                                                                                 >  1:176965/1‑251 (MQ=255)
                 cccTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAACCACCTTACGTTTAAACGCGGTGAACGGATTATTTCCCACGATCTGATTTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatgatg                                                                                                                                                                                                                               <  1:422377/250‑1 (MQ=255)
                        aGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGAAAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAAc                                                                                                                                                                                                                                        <  1:222083/235‑1 (MQ=255)
                           tttATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACg                                                                                                                                                                                                                     >  1:555327/1‑251 (MQ=255)
                                 aaggAAACGTTAATTGAAGTAAAACCCCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATggg                                                                                                                                                                                                               <  1:538812/248‑1 (MQ=255)
                                     aaaCGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatga                                                                                                                                                                                                                                 >  1:732785/1‑229 (MQ=255)
                                       aCGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGGATg                                                                                                                                                                                                           >  1:154475/1‑249 (MQ=255)
                                        ctttAATTGAAGTAAAACCCCTTACGTTTAAACGCGGTAACCGGATTATTTACCACGATTTGAATTTGCGCGTTCCCCGCGAAAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTg                                                                                                                                                                                                        <  1:780025/249‑1 (MQ=255)
                                        cGTTAATTGAAGTAAACCCCCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCAACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTg                                                                                                                                                                                                        <  1:625248/251‑1 (MQ=255)
                                        cGTTAATTGAAGAAAACCACCTTACGTTAAAACGCGGTGACCGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTg                                                                                                                                                                                                        <  1:380510/251‑1 (MQ=255)
                                                 aaGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATc                                                                                                                                                                                                <  1:97059/250‑1 (MQ=255)
                                                   gTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACg                                                                                                                                                                                                                     >  1:391086/1‑227 (MQ=255)
                                                         ccccttccttttAAACGCGGTGAACGGATTATTTCCCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATc                                                                                                                                                                                                <  1:290751/233‑1 (MQ=255)
                                                         cacCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCatt                                                                                                                                                                                       >  1:256496/1‑251 (MQ=255)
                                                         cacCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGGGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGGATGCTGTTTCAATCCGGCGCatt                                                                                                                                                                                       >  1:344967/1‑251 (MQ=255)
                                                           ccTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatga                                                                                                                                                                                                                                 >  1:858957/1‑207 (MQ=255)
                                                               ccGTTTAAACGCGGTGAACGGATTATTTACCCCGATCTGAATTTGCGCGTTCCCCGCGAAAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCAc                                                                                                                                                                                 <  1:503678/250‑1 (MQ=255)
                                                                cGTTTAAACGGGGTGAACGGATTATTTCCCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatgatg                                                                                                                                                                                                                               <  1:860872/204‑1 (MQ=255)
                                                                cGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATgttg                                                                                                                                                                                                        <  1:310145/227‑4 (MQ=255)
                                                                cGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGGATGCTGTTTCAATCCGGCGCATTATTCAc                                                                                                                                                                                 >  1:55642/1‑250 (MQ=255)
                                                                cGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGGGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCAc                                                                                                                                                                                 >  1:823603/1‑250 (MQ=255)
                                                                  tttAAACGCGGTGAACGGTTTATTTACCACGATCTGAATTTGCGCGTCCCCCGCAACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGGGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGa                                                                                                                                                                              <  1:224067/251‑1 (MQ=255)
                                                                        cggggTGAACGGATTATTTCCCACGATCTGAATTTGCGCGTGCCCCGCAACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCTCCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAg                                                                                                                                                                                                                                             <  1:33739/179‑1 (MQ=255)
                                                                            gTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACTGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCAc                                                                                                                                                                     >  1:321450/1‑250 (MQ=255)
                                                                            gTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCAc                                                                                                                                                                     >  1:591510/1‑250 (MQ=255)
                                                                            gTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGGATGc                                                                                                                                                                                                          >  1:414960/1‑213 (MQ=255)
                                                                             tGAACGGATTATTTACCTCAATCTAAATTTCCGCTTCCCCCGCGACAAATTTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCAcc                                                                                                                                                                    <  1:191198/250‑1 (MQ=255)
                                                                              gAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCAcc                                                                                                                                                                    >  1:26647/1‑249 (MQ=255)
                                                                                   gATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTg                                                                                                                                                                                                        >  1:845709/1‑208 (MQ=255)
                                                                                   gATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGAt                                                                                                                                                              <  1:585939/250‑1 (MQ=255)
                                                                                   gATTATTTACCACGATCAGAATTTGCGCGTTCCCCGCGACAAAATAACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGAt                                                                                                                                                              <  1:550825/250‑1 (MQ=255)
                                                                                       attTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatga                                                                                                                                                                                                                                 >  1:221479/1‑179 (MQ=255)
                                                                                       attTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatga                                                                                                                                                                                                                                 <  1:719822/179‑1 (MQ=255)
                                                                                       attTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGt                                                                                                                                                                                                              >  1:650029/1‑198 (MQ=255)
                                                                                       attTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGGGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGGACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAAtgt                                                                                                                                                         >  1:442938/1‑251 (MQ=255)
                                                                                                gATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGGTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGGGAACTTTATTATGTGCGCAAACGCATGGGTATTCTGTTTCAATACGGCGCATTATTCACCGACATTTCTACCTTTGAt                                                                                                                                                              >  1:189254/1‑237 (MQ=255)
                                                                                                 atttaattttGCGCTTTCCCCGCGACAAAATTTCCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATaa                                                                                                                                                            <  1:339875/231‑1 (MQ=255)
                                                                                                 aTCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTTGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCa                                                                                                                                                                      >  1:684806/1‑228 (MQ=255)
                                                                                                 aTCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCtt                                                                                                                                                                  <  1:876601/232‑1 (MQ=255)
                                                                                                 aTCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGGGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGGATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTc                                                                                                                                                 >  1:785640/1‑249 (MQ=255)
                                                                                                     gAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGGAGGAGAAATTCTGTTCGACGGGCAAGAAATTTGCAAATTATCCAACAGTGAACCTTATGATGTGCGCAAACGCATGGGGATGCTGATTCAATCCCGCGCATTATTCACCGATATTTTCACCTTTGATAATGTTGCATTTCCTAttt                                                                                                                                           >  1:422136/1‑250 (MQ=255)
                                                                                                     gAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatgatg                                                                                                                                                                                                                               <  1:683341/167‑1 (MQ=255)
                                                                                                     gAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCAc                                                                                                                                                                     <  1:626569/225‑1 (MQ=255)
                                                                                                      aaTTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTc                                                                                                                                           <  1:570237/250‑1 (MQ=255)
                                                                                                        tttGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCgag                                                                                                                                        <  1:217262/251‑1 (MQ=255)
                                                                                                                  ccccGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTatga                                                                                                                                                                                                                                 >  1:694928/1‑152 (MQ=255)
                                                                                                                             aaTTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGt                                                                                                                                                                                                              >  1:71979/1‑160 (MQ=255)
                                                                                                                                     ccATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGAt                                                                                                            <  1:803497/250‑1 (MQ=255)
                                                                                                                                        ttATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTg                                                                                                                                                                                                        >  1:474968/1‑155 (MQ=255)
                                                                                                                                        ttATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCAc                                                                                                                                                                     >  1:769134/1‑190 (MQ=255)
                                                                                                                                        ttATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGa                                                                                                        >  1:43450/1‑251 (MQ=255)
                                                                                                                                        ttATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGa                                                                                                        >  1:538398/1‑251 (MQ=255)
                                                                                                                                          aTGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGaaa                                                                                                      <  1:228868/251‑1 (MQ=255)
                                                                                                                                          aTGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGaaa                                                                                                      <  1:78660/251‑1 (MQ=255)
                                                                                                                                                 cGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGc                                                                                                                                                                                                          <  1:111003/144‑1 (MQ=255)
                                                                                                                                                  gTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCAcc                                                                                                                                                                                >  1:738287/1‑169 (MQ=255)
                                                                                                                                                  gTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCaa                                                                                                                              <  1:241984/219‑1 (MQ=255)
                                                                                                                                                   tCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTAt                                                                                              <  1:14624/250‑1 (MQ=255)
                                                                                                                                                       ggATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAAc                                                                                                                                                                                                                                               >  1:465305/1‑101 (MQ=255)
                                                                                                                                                        gATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGa                                                                                        >  1:312645/1‑251 (MQ=255)
                                                                                                                                                            ggTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGaaa                                                                                      >  1:458007/1‑249 (MQ=255)
                                                                                                                                                             gTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACt                                                                                    <  1:844375/250‑1 (MQ=255)
                                                                                                                                                                  accaccCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGc                                                                              <  1:371698/251‑1 (MQ=255)
                                                                                                                                                                                 cTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCg                                                                                                                                          <  1:456961/176‑1 (MQ=255)
                                                                                                                                                                                   cATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATc                                                                                                                            >  1:210504/1‑188 (MQ=255)
                                                                                                                                                                                          ggTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATcc                                                                                                                                                                                               >  1:745071/1‑114 (MQ=255)
                                                                                                                                                                                               gCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATc                                                                                                                            <  1:724749/176‑1 (MQ=255)
                                                                                                                                                                                                  gATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGccgccg                                                       >  1:178624/1‑242 (MQ=255)
                                                                                                                                                                                                   aTGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGCCGCCGATTTAATGcc                                             <  1:198771/251‑1 (MQ=255)
                                                                                                                                                                                                               ggTGAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGCCGCCGATTTAATGCCTTCCGAACttt                                  >  1:393928/1‑250 (MQ=255)
                                                                                                                                                                                                                  gAAATTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGCCGCCGATTTAATGCCTTCCGAACTTTCcgg                              >  1:832412/1‑251 (MQ=255)
                                                                                                                                                                                                                   aaaTTCTGTTCGACGGGCAAGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGCCGCCGATTTAATGCCTTCCGAACTTTCcggc                             <  1:798535/251‑1 (MQ=255)
                                                                                                                                                                                                                                      aGATATTTGCAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGCATAATAGTATTAATGAAACTCGAAGCGGTGGGc                                                                       >  1:543924/1‑190 (MQ=255)
                                                                                                                                                                                                                                               cAAATTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGCCGCCGATTTAATGCCTTCCGAACTTTCCGGCGGGATGGCGCGTCGTGCCGCGCTCGcc  <  1:554877/250‑1 (MQ=255)
                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                     
AGGCAATTCAAGCCGTAACCTAGCAGTTTTATGAACGAAACGTTAATTGAAGTAAAACACCTTACGTTTAAACGCGGTGAACGGATTATTTACCACGATCTGAATTTGCGCGTTCCCCGCGACAAAATTACCGCCATTATGGGACCGTCAGGGATTGGTAAAACCACCCTTTTGAAACTCATCGGCGGTCAGCTGATGCCTTCCGAAGGTGAAATTCTGTTCGACGGGCAAGATATTTGCAAACTATCCAACAGTGAACTTTATGATGTGCGCAAACGCATGGGTATGCTGTTTCAATCCGGCGCATTATTCACCGATATTTCCACCTTTGATAATGTGGCATTTCCTATTCGAGAGCACACCAATCTGCCTCCGTCGTTGATTAGAAAAATAGTATTAATGAAACTCGAAGCGGTGGGCTTGCGCGGTGCCGCCGATTTAATGCCTTCCGAACTTTCCGGCGGGATGGCGCGTCGTGCCGCGCTCGCC  >  1/1222976‑1223464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑