| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,212,862 | A→G | I175I (ATT→ATC) | unknown ← | Guanosine‑3',5'‑bis(diphosphate) 3'‑pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,212,862 | 0 | A | G | 100.0% | 224.1 / NA | 82 | I175I (ATT→ATC) | unknown | Guanosine‑3',5'‑bis(diphosphate) 3'‑pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (43/39); total (43/39) | |||||||||||
ATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTCACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATTTTCCAGTTCGTTTTTGATGTGCTCAAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGTCGAGTTTTGAAACGCCTTCTACGATTTCCG > 1/1212617‑1213106 | aTGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑cc > 1:706129/1‑250 (MQ=255) ggAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCa > 1:257088/1‑251 (MQ=255) gAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCaa > 1:357349/1‑251 (MQ=255) gAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCaa > 1:674996/1‑251 (MQ=255) aaTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAg < 1:48880/251‑1 (MQ=255) aaTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAg < 1:306005/251‑1 (MQ=255) aTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAg > 1:251912/1‑250 (MQ=255) aTGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGc < 1:322139/251‑1 (MQ=255) aTCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAAc < 1:416900/250‑1 (MQ=255) tCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACgg < 1:409065/251‑1 (MQ=255) tttAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACggcg > 1:901830/1‑248 (MQ=255) cgcATTTTTTGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCCTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATaaa < 1:451715/250‑1 (MQ=255) ttttGGTAGATGGCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAg < 1:222740/222‑1 (MQ=255) gCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTgg > 1:224220/1‑250 (MQ=255) gCATACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTgg > 1:732024/1‑250 (MQ=255) tACAAATGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGAt > 1:524674/1‑251 (MQ=255) aaTGCTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATacga < 1:371695/251‑1 (MQ=255) cTTTTTACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACgg < 1:559403/250‑1 (MQ=255) cccGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAg < 1:588722/190‑1 (MQ=255) cccGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATaaa < 1:259763/212‑1 (MQ=255) gAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAg > 1:325304/1‑187 (MQ=255) gAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCttt > 1:62814/1‑225 (MQ=255) gAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGa > 1:710691/1‑250 (MQ=255) ccGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATg < 1:41916/251‑1 (MQ=255) cgcTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATgcgc < 1:393125/251‑1 (MQ=255) cTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACgg > 1:827587/1‑190 (MQ=255) cTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATaaa < 1:118622/198‑1 (MQ=255) cTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATgcg > 1:164219/1‑248 (MQ=255) tGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCtt > 1:219115/1‑211 (MQ=255) tGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAg > 1:219628/1‑251 (MQ=255) tGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAg < 1:718935/251‑1 (MQ=255) aaTACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAggg < 1:402600/251‑1 (MQ=255) aaTACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAggg > 1:153790/1‑251 (MQ=255) aaTACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCACAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAggg < 1:117099/251‑1 (MQ=255) cccACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTgcg > 1:501206/1‑251 (MQ=255) cccACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTgcg > 1:660520/1‑251 (MQ=255) cccACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTgcg > 1:495507/1‑251 (MQ=255) cccACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATCACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGCTACATGGCCTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATCTCCAGGGTTTCTCTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTgcg > 1:497371/1‑251 (MQ=255) cacaTCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCa < 1:717617/251‑1 (MQ=255) aaaCGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGt < 1:902122/251‑1 (MQ=255) aaCGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGtt < 1:873461/251‑1 (MQ=255) aaCGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGtt < 1:263162/251‑1 (MQ=255) cccTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCAt > 1:878689/1‑237 (MQ=255) cccTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTtcggt > 1:473330/1‑251 (MQ=255) cTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTtcggtcg > 1:762166/1‑251 (MQ=255) aTTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAg < 1:236755/251‑1 (MQ=255) gtcgGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTtga > 1:416070/1‑251 (MQ=255) gTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACcaca > 1:223615/1‑251 (MQ=255) aTCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCAt < 1:253584/209‑1 (MQ=255) aTGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAatat > 1:682822/1‑250 (MQ=255) ttGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGt < 1:364200/251‑1 (MQ=255) tGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACAAGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTc < 1:58477/251‑1 (MQ=255) cGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCAt > 1:514421/1‑251 (MQ=255) tACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCa < 1:171315/251‑1 (MQ=255) cgcgcAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGAt > 1:665490/1‑251 (MQ=255) cgcgcAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTGTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGa < 1:454076/250‑1 (MQ=255) aCTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAAtt > 1:299806/1‑251 (MQ=255) ttGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAAc > 1:848951/1‑201 (MQ=255) ttGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCacac > 1:118276/1‑206 (MQ=255) tGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCAc < 1:412999/251‑1 (MQ=255) ccGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCg > 1:58698/1‑249 (MQ=255) cGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGctt < 1:706218/251‑1 (MQ=255) gCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATaaa < 1:560318/94‑1 (MQ=255) gCATAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAggg < 1:775415/151‑1 (MQ=255) tAACGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTgcg < 1:727438/152‑1 (MQ=255) aCGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGATCCCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGa > 1:282246/1‑251 (MQ=255) aCGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGAc < 1:653611/251‑1 (MQ=255) aCGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGGTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGAc < 1:158773/251‑1 (MQ=255) cGTTGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACg > 1:485713/1‑251 (MQ=255) tGCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAggg > 1:119845/1‑142 (MQ=255) gCGGATACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGtt > 1:491281/1‑251 (MQ=255) aTACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGCTGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGa > 1:452390/1‑251 (MQ=255) aTACATGGCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGa > 1:139844/1‑251 (MQ=255) gCTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAg > 1:774581/1‑251 (MQ=255) cTTCAAAACCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAg < 1:779682/250‑1 (MQ=255) aaaCCAAGATCTTCCAGTTCGTTTTTGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGt > 1:381451/1‑250 (MQ=255) tttttGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTcc < 1:762653/51‑1 (MQ=255) tttttGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGTCGAGTTTTGAAACGCCTTCTAc < 1:833940/251‑1 (MQ=255) tttGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGTCGAGTTTTGAAACGCCTTCTACGa < 1:367380/251‑1 (MQ=255) ttGATGTGCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGTCGAGTTTTGAAACGCCTTCTACGAt < 1:376772/251‑1 (MQ=255) gtgCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGTCGAGTTTTGAAACGCCTTCTACGATTTCcg > 1:307500/1‑251 (MQ=255) gtgCTCGAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGTCGAGTTTTGAAACGCCTTCTACGATTTCcg > 1:296770/1‑251 (MQ=255) | ATGGAATGAAACTGCTGATCTTTTAAGCGCATTTTTTGGTAGATGGCATACAAATGCTTTTCACGCCCGAATACCCGCGCTTGAATACCCACATCCTGCAAACGCCCTTTGATTTCGTCGGAAATTCGTTCAATCATGTCTTTGCGATTACCGCGCGCAATCTGTACGACTTTTTGCAAAACCGCATAACGTTGCGGATACATGGCTTCAAAACCAAGATTTTCCAGTTCGTTTTTGATGTGCTCAAT‑CCCCAAGCGATGCGCCAACGGTGCATAAATTTCCAGGGTTTCTTTGGCGATACGACGGCGTTTATCGGGACGTAATGCGCTGAGGGTGCGCATGTTGTGGGTTCGGTCGGCAAGTTTGATGAGAACCACACGAATATCCCTGGTCATGGCAAGGATCATTTTACGGAAATTTGCCACTTCCGCTTCTTGACGGGTTCTGAATTTGAGTTTGTCGAGTTTTGAAACGCCTTCTACGATTTCCG > 1/1212617‑1213106 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |