| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,179,315 | G→A | A56V (GCG→GTG) | unknown ← | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,179,315 | 0 | G | A | 98.7% | 190.8 / NA | 80 | A56V (GCG→GTG) | unknown | Exodeoxyribonuclease V beta chain (EC 3.1.11.5) |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (30/48); total (30/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
CGGCAAAATCCATGAATGGTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCTTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCGCTAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAACAAGGGCGGAAACCCGCTCCGCCCAATATCCTCATT > 1/1179072‑1179553 | cGGCAAAATCCATGAATGGTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAAt < 1:432204/251‑1 (MQ=255) ggCAAAATCCATGAATGGTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAAtt > 1:879012/1‑251 (MQ=255) cAAAATCCATGAATGGTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAAttt < 1:212854/250‑1 (MQ=255) aTCCATGAATGGTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTc > 1:282174/1‑250 (MQ=255) tGGTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAac < 1:810357/251‑1 (MQ=255) gTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCTTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAaca > 1:9077/1‑250 (MQ=255) gTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAaca > 1:672679/1‑250 (MQ=255) gTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAaca < 1:57117/250‑1 (MQ=255) gTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAaca > 1:704277/1‑250 (MQ=255) gTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAaca > 1:746325/1‑250 (MQ=255) cgccgcCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGaa < 1:410333/251‑1 (MQ=255) ccgccAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGaaa < 1:566729/250‑1 (MQ=255) gccAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAac < 1:675499/237‑1 (MQ=255) ccAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGc < 1:36828/250‑1 (MQ=255) cAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCAt < 1:194910/251‑1 (MQ=255) tCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAac < 1:139088/231‑1 (MQ=255) tCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCAtttt > 1:640702/1‑250 (MQ=255) ccGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGcaa > 1:726378/1‑250 (MQ=255) gCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGcaacaa > 1:751172/1‑251 (MQ=255) aGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGa > 1:13937/1‑250 (MQ=255) gAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAaga > 1:263757/1‑251 (MQ=255) gagGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAag > 1:69514/1‑241 (MQ=255) gggAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAAcc > 1:24708/1‑245 (MQ=255) aTCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTTAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAgg < 1:449202/251‑1 (MQ=255) aTCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGgtgt > 1:588719/1‑248 (MQ=255) tCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGt > 1:839151/1‑251 (MQ=255) tCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGt < 1:321327/251‑1 (MQ=255) ccGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGtt < 1:377487/251‑1 (MQ=255) tGATGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATaa < 1:193366/227‑1 (MQ=255) aTGGTATCGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGcc < 1:75908/251‑1 (MQ=255) agtaatggaaaaTTGGCGTAAAAAGTGATCGTGTACAAACACCGACGGATCCTGCTTTTATGGTTGCGCCGTAAATTTTTGTATGTCGTCATAAATCGGCTCGCAAATTTTACGTTTCAGTTCCACCGTTGCATTTTCGGTAAAGGTCCCCGCCAAAATTTCCCCCACATTAAACACATGAGAAAGGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGccc < 1:235714/240‑1 (MQ=255) cGGCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTcc > 1:865298/1‑249 (MQ=255) gCTAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAag > 1:402882/1‑218 (MQ=255) tAATTGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCag < 1:69515/251‑1 (MQ=255) ttGGCGTAAAAAGTCATCGTGTTCAAACCCCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAgg < 1:873078/251‑1 (MQ=255) ttGGCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAgg < 1:729034/251‑1 (MQ=255) ggCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAgg > 1:511767/1‑249 (MQ=255) gCGTAAAAAGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCtt > 1:147579/1‑251 (MQ=255) aaaaaGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAAt < 1:11206/251‑1 (MQ=255) aaaGTCATCGTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATaa < 1:477017/251‑1 (MQ=255) tcatcgttttCAAACACCGTCGGGTCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCCCCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGAc < 1:633862/242‑1 (MQ=255) gtGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAac < 1:393128/144‑1 (MQ=255) tGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATgg < 1:540925/250‑1 (MQ=255) gTTCAAACCCCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTCCCTCCGTTGCCATTTCGGTAAAGGTCACCCCCAAAATTTGCTCCACATTTAACACAGGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAag < 1:481198/193‑1 (MQ=255) gTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGtt < 1:502506/212‑1 (MQ=255) ttCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGt > 1:320546/1‑251 (MQ=255) tCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTGGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGtt < 1:3724/251‑1 (MQ=255) ccGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTcc > 1:827855/1‑155 (MQ=255) ccGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGtt < 1:893480/203‑1 (MQ=255) gTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAAt > 1:531739/1‑251 (MQ=255) gATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTGGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGtt < 1:17044/197‑1 (MQ=255) aTCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGaaa > 1:342587/1‑251 (MQ=255) gTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAAc > 1:281791/1‑175 (MQ=255) tttGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTg < 1:724540/251‑1 (MQ=255) tgttgATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAAcaca < 1:274914/120‑1 (MQ=255) ttgATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTg < 1:5046/251‑1 (MQ=255) tACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCAAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTg < 1:28508/251‑1 (MQ=255) cGTCATTTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCGCCACCAAAATTTGCTCCAGATTAAACGGATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATgg < 1:728560/251‑1 (MQ=255) tCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGtt < 1:265797/251‑1 (MQ=255) cAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGAc < 1:241669/203‑1 (MQ=255) ttttGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCTTTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCgg < 1:901566/251‑1 (MQ=255) ttttGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCgg < 1:45288/251‑1 (MQ=255) gTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGaataaaaat > 1:221365/1‑251 (MQ=255) tCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGTCGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGAc < 1:874102/187‑1 (MQ=255) tCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCgg < 1:804431/215‑1 (MQ=255) aaaTCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAaaaataaaat < 1:700728/251‑1 (MQ=255) ttACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATaa < 1:153871/163‑1 (MQ=255) ttACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAggg > 1:16782/1‑251 (MQ=255) ttACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTAAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAggg < 1:855592/251‑1 (MQ=255) tttCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAAcaca < 1:247261/64‑1 (MQ=255) tttCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAGGGCGGaa > 1:336446/1‑251 (MQ=255) ttCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAGGGCGGaaa > 1:138017/1‑251 (MQ=255) gTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGGCGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCgg > 1:331645/1‑208 (MQ=255) gTTCCTCCGTTGCCATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAag < 1:768055/106‑1 (MQ=255) ccATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAGGGCGGAAACCCGCTCCGCCCAata < 1:172490/251‑1 (MQ=255) cATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAGGGCGGAAACCCGCTCCGCCCAatat < 1:740829/251‑1 (MQ=255) cATTTCGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAGGGCGGAAACCCGCTCCGCCCAatat < 1:502381/251‑1 (MQ=255) cGGTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGAc < 1:652032/138‑1 (MQ=255) ggTAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAGGGCGGAAACCCGCTCCGCCCAATATCCTCAt > 1:154587/1‑251 (MQ=255) tAAAGGTCACCACCAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAAAAAGGGCGGAAACCCGCTCCGCCCAATATCCTCAtt < 1:504394/250‑1 (MQ=255) | CGGCAAAATCCATGAATGGTATAAATCGCCGCCAAATCCATGTTTTGTTCCGCCAAAGTCAGGCGCTGAATGGCAAGAGGGAAATCCGTGATGGTATCGGCTAATTGGCGTAAAAAGTCATCTTGTTCAAACACCGTCGGATCCTGCGTTTGTTGATACGCCGTCAATTTTTGTTTGGCGTCATAAATCCGCTCGCGAATTTTACGTTTCAGTTCCTCCGTTGCCATTTCGGTAAAGGTCACCGCTAAAATTTGCTCCACATTTAACACATGAGGAAAGGCATTTTCCCCCGCCTGCAACAACAGACGCAAATAAAGAGAACCCATGGTGTAGGTTTTGCCCGTCCCTGCAGAGGCTTCAATAAGACTGATGGCGTTTAACGGAATGGAAATCGGATTGAGTGCTTGCATGGTTACCGGTGAATAAAAATAAAATATTGAATAAAACAAGGGCGGAAACCCGCTCCGCCCAATATCCTCATT > 1/1179072‑1179553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |