| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | 1 | 1,163,311 | A→G | H216H (CAT→CAC) | unknown ← | tRNA 4‑thiouridine synthase (EC 2.8.1.4) / Rhodanese‑like domain required for thiamine synthesis |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | 1 | 1,163,311 | 0 | A | G | 100.0% | 162.1 / NA | 57 | H216H (CAT→CAC) | unknown | tRNA 4‑thiouridine synthase (EC 2.8.1.4) / Rhodanese‑like domain required for thiamine synthesis |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (29/28); total (29/28) | |||||||||||
AAGGTTTGGCTGGAAACCTGTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCATGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACCGTCACGTCAGGATTTTTCAGCTGCACTTTGGCAC > 1/1163066‑1163546 | aaGGTTTGGCTGGAACCCTGTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTgcgc < 1:510299/251‑1 (MQ=255) ggTTTGGCTGGAAACCTGTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTgcgccg > 1:239002/1‑251 (MQ=255) gCTGGAAACCTGTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGcgccgcgccg > 1:157146/1‑250 (MQ=255) gCTGGAAACCTGTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTT‑GTGCgccgcgccgc > 1:748722/1‑250 (MQ=255) aCCTGTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAAtt < 1:647642/251‑1 (MQ=255) gTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAaag > 1:75792/1‑251 (MQ=255) tCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATg < 1:562275/251‑1 (MQ=255) tCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATg > 1:309454/1‑251 (MQ=255) ccACCGGGGACGATCGCCTGAAGGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCAGGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACTTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTGTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATg < 1:669361/250‑1 (MQ=255) ccGGTGACGATCTCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCCCCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTAc < 1:693706/251‑1 (MQ=255) gTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACcg < 1:177448/241‑1 (MQ=255) gTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACa > 1:668823/1‑251 (MQ=255) ttGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCCCCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCCCCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGc < 1:577423/251‑1 (MQ=255) ttGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCCCCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGc < 1:479613/251‑1 (MQ=255) ttGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGc < 1:737613/251‑1 (MQ=255) tggggCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGc < 1:587336/249‑1 (MQ=255) aTTTTAGACGCGGCACGTACCATCATGCGTTTAAGCCCCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAaag < 1:511371/201‑1 (MQ=255) aTTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGaca > 1:591185/1‑250 (MQ=255) aTTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGac < 1:485246/249‑1 (MQ=255) ttttAGCCGCGGCACGTCCCATCATGCGTTTAAGCCCCCCGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTg < 1:459763/245‑1 (MQ=255) ggCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTAc > 1:604579/1‑204 (MQ=255) ccATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTgcgcc < 1:151196/164‑1 (MQ=255) cGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGc > 1:484242/1‑217 (MQ=255) gTTTAACCCCCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGac < 1:393821/221‑1 (MQ=255) tttAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAAc > 1:581363/1‑235 (MQ=255) tttAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACg > 1:577860/1‑251 (MQ=255) tAAGCACCCCGCCAATTTGCCCGTTATCCACGTTTTCCGGAGTCCCCCCCACCACGCCTGAAAAATTACTCGCCAAAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCAATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACTCCTGAATCAAACCCGCCGGAAATCAACGAc < 1:155466/251‑1 (MQ=255) caccacGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTgcgc < 1:477189/147‑1 (MQ=255) cGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAaaga > 1:504185/1‑162 (MQ=255) cccaaTTTGTCCGTAACCCACGTTTTCCAGAACCTCGCCAACCACGCCTTCAAAATTAACCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCtt < 1:275770/247‑1 (MQ=255) ccGTTATCCCCGTTTCCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGcc < 1:271216/251‑1 (MQ=255) ttCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACGGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAgccg > 1:449017/1‑250 (MQ=255) ttCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAAccc < 1:255980/201‑1 (MQ=255) ttCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTg > 1:687108/1‑231 (MQ=255) caccacGCCTTCAAAATTAATCGCCACAAACCGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAAc < 1:556441/251‑1 (MQ=255) caccacGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAAc < 1:239797/251‑1 (MQ=255) ccacGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACgg > 1:617290/1‑251 (MQ=255) ccACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTg > 1:351694/1‑251 (MQ=255) caAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGt < 1:784406/204‑1 (MQ=255) cTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCttcaatt > 1:660755/1‑251 (MQ=255) gtgCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAAc > 1:553016/1‑212 (MQ=255) cGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATg < 1:96439/250‑1 (MQ=255) cTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGcatcat > 1:668179/1‑224 (MQ=255) gCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGc > 1:616157/1‑116 (MQ=255) gCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGac < 1:364840/121‑1 (MQ=255) gCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAAt > 1:626241/1‑131 (MQ=255) gCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAAt > 1:670414/1‑131 (MQ=255) gCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAAtt > 1:472201/1‑178 (MQ=255) gCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACggg > 1:871784/1‑206 (MQ=255) tAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACcgtca < 1:671/250‑1 (MQ=255) tGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGc > 1:117916/1‑235 (MQ=255) gCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACCGTCACGTCAGGa > 1:588797/1‑251 (MQ=255) aTGTGATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATg > 1:840723/1‑228 (MQ=255) gtgATACGCCATTTGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACCGTCACGTCAGGATTTTTCa > 1:880567/1‑251 (MQ=255) ttGTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACCGTCACGTCAGGATTTTTCAGCTGCACTTTgg < 1:221250/251‑1 (MQ=255) gTTTCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACCGTCACGTCAGGATTTTTCAGCTGCACTTTGGCa > 1:617023/1‑251 (MQ=255) tttCACGCCGATTTCGTGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACCGTCACGTCAGGATTTTTCAGCTGCACTTTGGCAc < 1:162113/251‑1 (MQ=255) | AAGGTTTGGCTGGAAACCTGTCCTAACGCCTCACCGGTGACGATCGCCTGAATGTCGAAACGTTGGGCAATTTTAGACGCGGCACGTACCATCATGCGTTTAAGCACCACGCCCATTTGTCCGTTATCCACGTTTTCCAGAATCTCGCCCACCACGCCTTCAAAATTAATCGCCACAAAACGCACTTTGTGCGAGCTGCCGTAACGTTGCCAAATGTGATACGCCATTTGTTTCACGCCGATTTCATGCGCCGCGCCGCCTAAATTAAAGAAGCAATAATGTACGCGCGAACCGCGACGCAACAGCATATAGCTGGACACACCTGAATCAAACCCGCCGGAAATCAACGACAGCACGTCTTCCTGCGTGCCAATTGGGTAGCCGCCGATGCCTTCATAACGGGCGCGTACCAGCATCATTTTGTCGTCTTCAATTTCAATGCGTACCGTCACGTCAGGATTTTTCAGCTGCACTTTGGCAC > 1/1163066‑1163546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |