Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,140,780 C→T E39K (GAA→AAA)  unknown ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,140,7800CT100.0% 219.5 / NA 82E39K (GAA→AAA) unknownhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (38/44);  total (38/44)

GTAAATTGTCAGTGTTACGCCAATAATTGTAAAAAGTGAGTTAGCAAAATTGCTACTCATAGATTGACTAACTGAATCCAATAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAACACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCGTTTCGACAATTAGAATTTGCCATCAGCGGTTCGGCTTTTTTCTCACATTCTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCCACACTTTTAACTTCTTCTGAACAAGCACTTAAAGTTAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCGTATTAATTGAATATAACGCCCTTAACGTTTGAGCGACGTTGAGACGCTAACTGTTTTTGTTGCTCATTCATTAAGCGTCGGTATTCCGTTTGCCGTGCGTTGAAT  >  1/1140535‑1141010
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                      
gTAAATTGTCAGTGTCATGCCAATAATTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTa                                                                                                                                                                                                                                   >  1:136938/1‑251 (MQ=255)
      tGTCAGTGTCATGCCAATAATTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACAttt                                                                                                                                                                                                                             >  1:78536/1‑251 (MQ=255)
                  gCCAATAATTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAg                                                                                                                                                                                                                 >  1:191853/1‑251 (MQ=255)
                       taatTGTAAAAAGTGAGCTGGCAAAACTGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGAc                                                                                                                                                                                                                       >  1:858491/1‑240 (MQ=255)
                            ttgccgtaatatctggCAAAACTGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTc                                                                                                                                                                                                       <  1:593204/236‑1 (MQ=255)
                                             aaaaCTGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTctacgc                                                                                                                                                                                      <  1:898320/251‑6 (MQ=255)
                                                 ctGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCtttt                                                                                                                                                                                  >  1:429156/2‑251 (MQ=255)
                                                 ctGCTACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCtttt                                                                                                                                                                                  >  1:148409/2‑251 (MQ=255)
                                                     tACTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAAcc                                                                                                                                                                              <  1:617465/251‑2 (MQ=255)
                                                      aCTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAAt                                                                                                                                                                                               <  1:31945/233‑1 (MQ=255)
                                                      aCTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAAc                                                                                                                                                                               >  1:108910/1‑249 (MQ=255)
                                                       cTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTctacgc                                                                                                                                                                                      <  1:685145/241‑6 (MQ=255)
                                                       cTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTc                                                                                                                                                                                           <  1:339064/236‑1 (MQ=255)
                                                       cTCATAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCttt                                                                                                                                                                                   <  1:514144/244‑1 (MQ=255)
                                                          aTAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             >  1:94588/1‑231 (MQ=255)
                                                           tAGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             <  1:564909/230‑1 (MQ=255)
                                                            aGATTGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAAcctctt                                                                                                                                                                          >  1:616641/1‑248 (MQ=255)
                                                               ttGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    <  1:510211/251‑1 (MQ=255)
                                                               ttGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    <  1:755239/251‑1 (MQ=255)
                                                               ttGACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    <  1:163358/251‑1 (MQ=255)
                                                                 gACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGt                                                                                                                                                                                                         <  1:212568/212‑1 (MQ=255)
                                                                 gACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    >  1:522327/1‑249 (MQ=255)
                                                                 gACTAACTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    <  1:592640/249‑1 (MQ=255)
                                                                      aCTGAATCTAGTAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATttttct                                                                                                                                                                                                                                    <  1:657488/180‑1 (MQ=255)
                                                                         gaatctagtAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTaa                                                                                                                                                          >  1:468944/9‑251 (MQ=255)
                                                                          aatctagtAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTaa                                                                                                                                                          <  1:829647/243‑1 (MQ=255)
                                                                           atctagtAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAg                                                                                                                                                        <  1:832829/245‑1 (MQ=255)
                                                                           atctagtAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAg                                                                                                                                                        <  1:489736/245‑1 (MQ=255)
                                                                           atctagtAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAg                                                                                                                                                        <  1:470046/245‑1 (MQ=255)
                                                                              tagtAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGAATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGATCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    >  1:91494/4‑236 (MQ=255)
                                                                                 tAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAata                                                                                                                                                  >  1:26331/1‑251 (MQ=255)
                                                                                       aaTAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             <  1:434107/250‑1 (MQ=255)
                                                                                       aaTAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             <  1:802634/250‑1 (MQ=255)
                                                                                            cGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    <  1:132721/222‑1 (MQ=255)
                                                                                                     cGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAAcc                                                                                                                                                                              >  1:731728/1‑202 (MQ=255)
                                                                                                          ctctCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGt                                                                                                                                                                                                         >  1:272002/1‑171 (MQ=255)
                                                                                                          ctctCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             >  1:169242/1‑183 (MQ=255)
                                                                                                          ctctCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             >  1:768664/1‑183 (MQ=255)
                                                                                                          ctctCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             <  1:721465/183‑1 (MQ=255)
                                                                                                          ctctCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTctacgc                                                                                                                                                                                      >  1:19210/1‑185 (MQ=255)
                                                                                                            ctcAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTctacgct                                                                                                                                                                                     <  1:717610/189‑7 (MQ=255)
                                                                                                            ctcAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCa                                                                                                                       >  1:288558/1‑251 (MQ=255)
                                                                                                              cAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTctacgc                                                                                                                                                                                      >  1:264438/1‑181 (MQ=255)
                                                                                                                    aTCTCATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    <  1:742845/198‑1 (MQ=255)
                                                                                                                      ctcATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             <  1:160224/219‑1 (MQ=255)
                                                                                                                      ctcATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGc                                                                                                                                        <  1:225026/224‑1 (MQ=255)
                                                                                                                        cATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGtg                                                                                                                                                      >  1:134306/1‑207 (MQ=255)
                                                                                                                        cATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             >  1:328825/1‑217 (MQ=255)
                                                                                                                        cATAATGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             >  1:304672/1‑217 (MQ=255)
                                                                                                                           aaTGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCatat                                                                                                        >  1:649048/1‑251 (MQ=255)
                                                                                                                            aTGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCa                                                                                                                                                               <  1:569840/195‑1 (MQ=255)
                                                                                                                            aTGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             >  1:325351/1‑213 (MQ=255)
                                                                                                                            aTGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             >  1:198681/1‑213 (MQ=255)
                                                                                                                            aTGATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATAtt                                                                                                       >  1:349590/1‑251 (MQ=255)
                                                                                                                              gATAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             >  1:796502/1‑163 (MQ=255)
                                                                                                                               aTAACCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTag                                                                                                     <  1:384385/250‑2 (MQ=255)
                                                                                                                                 aaCCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             <  1:588218/160‑1 (MQ=255)
                                                                                                                                 aaCCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTg                                                                                                  <  1:524314/251‑1 (MQ=255)
                                                                                                                                  aCCTAATTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGa                                                                                                 >  1:326000/1‑251 (MQ=255)
                                                                                                                                      aaTTAGTAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAatat                                                                                             <  1:47796/251‑1 (MQ=255)
                                                                                                                                      aaTTAGAAAAATTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAatat                                                                                             <  1:584480/251‑1 (MQ=255)
                                                                                                                                            aaaaaTTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGc                                                                                        <  1:229055/250‑1 (MQ=255)
                                                                                                                                               aaTTAGCACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    <  1:826253/171‑1 (MQ=255)
                                                                                                                                                     cacCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACg                                                                                <  1:505105/249‑1 (MQ=255)
                                                                                                                                                     cacCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACGtt                                                                              >  1:512594/1‑251 (MQ=255)
                                                                                                                                                          cGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTc                                                                                                                                                                                                       <  1:626447/125‑1 (MQ=255)
                                                                                                                                                             gTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTAt                                                                                                                                                                                                           <  1:794157/118‑1 (MQ=255)
                                                                                                                                                               aTTCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGtg                                                                                                                                                      <  1:371754/169‑2 (MQ=255)
                                                                                                                                                                ttCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAAc                                                                                                                                                                    >  1:647249/1‑154 (MQ=255)
                                                                                                                                                                ttCATACGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATataaat                                                                                                                                             >  1:223406/1‑177 (MQ=255)
                                                                                                                                                                ttCATACGTCGAATACTTGCTTGTGCTTTATTAGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAc                                                                                                                                                                                             >  1:95643/1‑129 (MQ=255)
                                                                                                                                                                      cGTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATAcctg                                                                                                                                                                                          <  1:712240/126‑4 (MQ=255)
                                                                                                                                                                       gTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTaa                                                                                                                                                          >  1:346764/1‑157 (MQ=255)
                                                                                                                                                                       gTCGAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACGTTTAAGCGACGTTGAGACg                                                             >  1:800828/1‑250 (MQ=255)
                                                                                                                                                                          gAATACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTagtt                                                                                                   <  1:324995/209‑4 (MQ=255)
                                                                                                                                                                            aTACTTGCTTGTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAAt                                                                                                                                                                                               <  1:875213/115‑1 (MQ=255)
                                                                                                                                                                                 tgcttgTGCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGc                                                                                        >  1:743181/1‑213 (MQ=255)
                                                                                                                                                                                        gCTTTATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACg                                                                                <  1:737249/214‑1 (MQ=255)
                                                                                                                                                                                            tATTTGCATTACTACAATTGGAGTTTGCCATTAATGGCTCCGCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTctac                                                                                                                                                                                        <  1:382891/106‑4 (MQ=255)
                                                                                                                                                                                                              tggagtttgccattaatggctccgCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACGTTTAAGCGACGTTGAGACGCTAACTGTTTTTGTTGCTCATTCATTAAGCGTAGGTATTc                     <  1:6414/228‑1 (MQ=255)
                                                                                                                                                                                                                       ccattaatggctccgCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACGTTTAAGCGACGTTGAGACGCTAACTGTTTTTGTTGCTCATTCATTAAGCGTAGGTATTCCGTTTGCCg            >  1:717084/15‑251 (MQ=255)
                                                                                                                                                                                                                         attaatggctccgCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACGTTTAAGCGACGTTGAGACGCTAACTGTTTTTGTTGCTCATTCATTAAGCGTAGGTATTCCGTTTGCCGTg          >  1:397596/13‑251 (MQ=255)
                                                                                                                                                                                                                                 ctccgCTTTTTTCTCACATTTTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCTACGCTTTTAACCTCTTCTGAACAGGCACTTAAAGTGAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCATATTAGTTGAATATAACGCCCTTAACGTTTAAGCGACGTTGAGACGCTAACTGTTTTTGTTGCTCATTCATTAAGCGTAGGTATTCCGTTTGCCGTGCGTTGAAt  <  1:562322/247‑1 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                      
GTAAATTGTCAGTGTTACGCCAATAATTGTAAAAAGTGAGTTAGCAAAATTGCTACTCATAGATTGACTAACTGAATCCAATAACTGAATAACGAAAGAATCGATACTCTCAAAGAATCTCATAATGATAACCTAATTAGAAAAATTAACACCTCGAGTATTCATACGTCGAATACTTGCTTGTGCTTTATTTGCGTTTCGACAATTAGAATTTGCCATCAGCGGTTCGGCTTTTTTCTCACATTCTTCTAACATTTTTTGACGTTCAGTCGTATGTTCTTTGTAATACTCCACACTTTTAACTTCTTCTGAACAAGCACTTAAAGTTAATATAAATAATGCGATAAAAAGTTTTTTCATCTTTTACTCCGTATTAATTGAATATAACGCCCTTAACGTTTGAGCGACGTTGAGACGCTAACTGTTTTTGTTGCTCATTCATTAAGCGTCGGTATTCCGTTTGCCGTGCGTTGAAT  >  1/1140535‑1141010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑