Predicted mutation
evidence seq id position mutation annotation gene description
RA 1 1,137,496 G→T P118P (CCC→CCA)  unknown ← Inner membrane protein of type IV secretion of T‑DNA complex, TonB‑like, VirB10

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*11,137,4960GT100.0% 208.6 / NA 74P118P (CCC→CCA) unknownInner membrane protein of type IV secretion of T‑DNA complex, TonB‑like, VirB10
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (34/40);  total (34/40)

ACAAGTTTTGTGCGTAAGGAACACTGAATAAAAGTGCCTTTTGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGCGCTTTACCCGCTTTAAACGTACTGACGTTATCTTCAAACATATCGCCTTTTGCCGGTTCCGGTGGTTGATTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATTTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGGGGGGCGGATGGAATATCTAACGCCTCTGTCGTACTATGATTTTCTACTGGAGCGGTTGCGGTAGGAATTGGTTGTGGCTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAA  >  1/1137251‑1137742
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
tgcactggttgaatcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGc                                                                                                                                                                                                                                                   <  1:421122‑M2/209‑1 (MQ=255)
            atcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATc                                                                                                                                                                                                                                       <  1:762157‑M2/221‑1 (MQ=255)
            atcggtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATc                                                                                                                                                                                                                                       <  1:465065‑M2/221‑1 (MQ=255)
                gtgatcatgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTaa                                                                                                                                                                                                                                    >  1:53515‑M2/27‑250 (MQ=255)
                       tgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTaa                                                                                                                                                                                                                                    <  1:340545‑M2/224‑1 (MQ=255)
                       tgcttaacatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCct                                                                                                                                                                                                                               >  1:735888‑M2/20‑248 (MQ=255)
                             acatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCgtt                                                                                                                                                                                                                       >  1:824851‑M2/14‑249 (MQ=255)
                             acatgatggcattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGGTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGt                                                                                                                                                                                                                           <  1:438377‑M2/233‑1 (MQ=255)
                                   tggcaatGCCAACAGTAAAGTGGAATTGACCGGGGGTTTATGGGCTTTACCTGCTTTAAACCTACTGGCGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGGATTCTGAACATCTGAAACGGCTTGTAACGTTTCGGCATCGGTAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAt                                                                                                                                                                                                                <  1:711814/245‑1 (MQ=255)
                                      cattGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAttt                                                                                                                                                                                                              <  1:572534‑M2/246‑1 (MQ=255)
                                       attGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAtttt                                                                                                                                                                                                             >  1:436239‑M2/4‑250 (MQ=255)
                                           ccAACAGTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTACAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTAc                                                                                                                                                                                                         <  1:93970/250‑1 (MQ=255)
                                                 gTAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGGACCGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGGTTCGCCATCGATAGTACCCGGAGACAATCCATTGATTAAACGTGGGGCGGATGGCATATCTAACGcc                                                                                                                                                                                                                                <  1:427208/221‑1 (MQ=255)
                                                  tAAATTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAg                                                                                                                                                                                                    <  1:850764/248‑1 (MQ=255)
                                                   aaaTTGGCATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGa                                                                                                                                                                                                                 <  1:60336/234‑1 (MQ=255)
                                                          cATTGACCGGGAGTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGt                                                                                                                                                                                          <  1:875313/250‑1 (MQ=255)
                                                                      gTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTtgt                                                                                                                                                                             >  1:726828/1‑251 (MQ=255)
                                                                      gTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTtgg                                                                                                                                                                             >  1:565268/1‑250 (MQ=255)
                                                                      gTTTATGGGCTTTACCTGCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAAAGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTTCGGTAggc                                                                                                                                                                                      >  1:46284/1‑241 (MQ=255)
                                                                                       gCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTtg                                                                                                                                                                              <  1:642938/233‑1 (MQ=255)
                                                                                       gCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAAt                                                                                                                                                            >  1:399249/1‑251 (MQ=255)
                                                                                       gCTTTAAACGTACTGACGTTATCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAAt                                                                                                                                                            >  1:762/1‑251 (MQ=255)
                                                                                                           aTCTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTa                                                                                                                                                                                         <  1:826641/202‑1 (MQ=255)
                                                                                                             cTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGAttt                                                                                                                                                                                                              >  1:398173/1‑179 (MQ=255)
                                                                                                             cTTCAAATATATCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCggtggg                                                                                                                                      >  1:186330/1‑250 (MQ=255)
                                                                                                                    tatatCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGt                                                                                                                                                                                >  1:593475/2‑202 (MQ=255)
                                                                                                                    tatatCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTaa                                                                                                                               >  1:264328/2‑251 (MQ=255)
                                                                                                                       atCGCCTTTTGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATg                                                                                                                            <  1:484210/251‑1 (MQ=255)
                                                                                                                               ttGCCGGTTCCGGTGGTTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGaa                                                                                                                    <  1:848378/251‑1 (MQ=255)
                                                                                                                                           gtggtTGGTTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACcgtcgt                                                                                                         <  1:395665/250‑1 (MQ=255)
                                                                                                                                            tggttggtTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTAc                                                                                                       <  1:50322/251‑1 (MQ=255)
                                                                                                                                               ttggttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCg                                                                                                     <  1:892278/246‑1 (MQ=255)
                                                                                                                                                tggttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAggc                                                                                                                                                                                      <  1:858321/165‑2 (MQ=255)
                                                                                                                                                  gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGATACAATCCTTTGATTAAACGTGGGGCGGTTGGCATATCTAACGCCTCTGTCGTTCTATGCTTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGTGATTTCTTCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGCAtt                                                                                                 >  1:592228/2‑251 (MQ=255)
                                                                                                                                                  gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCg                                                                                                                                                                                                                         >  1:245266/2‑131 (MQ=255)
                                                                                                                                                  gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAAtt                                                                                                 >  1:132038/2‑251 (MQ=255)
                                                                                                                                                  gttAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGGGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAAt                                                                                                  >  1:537108/2‑250 (MQ=255)
                                                                                                                                                             tgtCAGTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTc                                                                                       >  1:117191/1‑250 (MQ=255)
                                                                                                                                                                  gTTGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTaa                                                                                  >  1:48056/1‑250 (MQ=255)
                                                                                                                                                                   ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                                                                                <  1:537536/251‑1 (MQ=255)
                                                                                                                                                                   ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                                                                                <  1:366638/251‑1 (MQ=255)
                                                                                                                                                                   ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                                                                                <  1:519502/251‑1 (MQ=255)
                                                                                                                                                                   ttGTATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                                                                                <  1:712206/251‑1 (MQ=255)
                                                                                                                                                                      tATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGc                                                                                                                                                                                                                                 <  1:622623/103‑1 (MQ=255)
                                                                                                                                                                      tATCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGttttgaa                                                                                                                     >  1:605665/1‑208 (MQ=255)
                                                                                                                                                                        tCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                                                                                >  1:829485/1‑246 (MQ=255)
                                                                                                                                                                        tCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCtgtg                                                                            >  1:88770/1‑250 (MQ=255)
                                                                                                                                                                        tCTGTATTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCtgtg                                                                            >  1:467966/1‑250 (MQ=255)
                                                                                                                                                                             aTTCTGAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGtt                                                                      >  1:494765/1‑251 (MQ=255)
                                                                                                                                                                                  gAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTg                                                                     <  1:106446/247‑1 (MQ=255)
                                                                                                                                                                                  gAACATCTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTa                                                                 >  1:477622/1‑251 (MQ=255)
                                                                                                                                                                                     catctGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATc                                                               >  1:770005/5‑250 (MQ=255)
                                                                                                                                                                                     catctGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGGAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCg                                                                                                     >  1:217931/5‑212 (MQ=255)
                                                                                                                                                                                               ggCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATg                                                                                                                            <  1:529468/179‑1 (MQ=255)
                                                                                                                                                                                                gCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTggt                                                                                                                                                                          <  1:714805/132‑2 (MQ=255)
                                                                                                                                                                                                gCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTc                                                                                       <  1:46622/215‑1 (MQ=255)
                                                                                                                                                                                                gCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCaa                                                   >  1:161281/1‑251 (MQ=255)
                                                                                                                                                                                                    gTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCt                                                                               <  1:660966/219‑1 (MQ=255)
                                                                                                                                                                                                      aaCGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGTGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGa                                             <  1:415863/251‑1 (MQ=255)
                                                                                                                                                                                                             cGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAAccc                                      <  1:204104/251‑1 (MQ=255)
                                                                                                                                                                                                               ccATCGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGt                                                                                                                                                                                          <  1:230097/101‑1 (MQ=255)
                                                                                                                                                                                                                   cGATAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCaaaaa                                 >  1:845213/1‑250 (MQ=255)
                                                                                                                                                                                                                     aTAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTgg                                                                                                                                                                                 <  1:575630/104‑1 (MQ=255)
                                                                                                                                                                                                                     aTAGTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATCGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGc                                                                           >  1:791342/1‑206 (MQ=255)
                                                                                                                                                                                                                        gTACCCGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGcc                                                                          <  1:868652/204‑1 (MQ=255)
                                                                                                                                                                                                                           cccGGAGACAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAAcc                                                                                <  1:66401/195‑1 (MQ=255)
                                                                                                                                                                                                                                agaCAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCtt                                                            >  1:487867/1‑210 (MQ=255)
                                                                                                                                                                                                                                agaCAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAAGCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGc                    <  1:737058/250‑1 (MQ=255)
                                                                                                                                                                                                                                  aCAATCCTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAg                  <  1:51334/250‑1 (MQ=255)
                                                                                                                                                                                                                                       ccTTTGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCaat            >  1:812013/1‑251 (MQ=255)
                                                                                                                                                                                                                                         tttGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCaataa          <  1:763379/251‑1 (MQ=255)
                                                                                                                                                                                                                                           tGATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATc        <  1:664779/251‑1 (MQ=255)
                                                                                                                                                                                                                                            gATTAAACGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGcc                             >  1:579407/1‑229 (MQ=255)
                                                                                                                                                                                                                                                 aaCGTGGGGCGGATGGCATATCTAACGCCTCTGTCGTTCTATGATTTTCTACTGGAGCGGTTGCGGTAGGCATTGGTTGTGGTTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGaaaa  >  1:571736/1‑251 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      
ACAAGTTTTGTGCGTAAGGAACACTGAATAAAAGTGCCTTTTGCCAACAGTAAATTGGCATTGACCGGGAGTTTATGCGCTTTACCCGCTTTAAACGTACTGACGTTATCTTCAAACATATCGCCTTTTGCCGGTTCCGGTGGTTGATTAGTTACCGTGTCAGTTGTATCTGTATTCTGAACATTTGAAACGGCTTGTAACGTTTCGCCATCGATAGTACCCGGAGACAATCCTTTGATTAAACGGGGGGCGGATGGAATATCTAACGCCTCTGTCGTACTATGATTTTCTACTGGAGCGGTTGCGGTAGGAATTGGTTGTGGCTCCGGATTTAAAATCGCCGGGATTTCTGCCGGTGGTGCCGTAAATGTTTTTGAACGCACCGTCGTACCGAATTCTTCTTTTTCCTTAACCTGTGCCGGTTGCGTATCCTTTTTATTCAAAAAGGAATAACCCAAAAACGCCACGGCAAGCAGTGCAATAATCAGAAAA  >  1/1137251‑1137742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑